RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 APOBRQ0VD83 1088 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 TRDNQ13061 729 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 FAM198AQ9UFP1 575 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 ECM29Q5VYK3 1845 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 SPDYE2BA6NHP3 402 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 SPDYE6P0CI01 402 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 CUL4AQ13619 759 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 ZKSCAN3Q9BRR0 538 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 ZSWIM5Q9P217 1185 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 GJA3Q9Y6H8 435 aa20.44■□□□□ 0.86
PPFIA3-207ENST00000602716 POLR3DP05423 398 aaPredicted RBP20.43■□□□□ 0.86
PPFIA3-207ENST00000602716 LMNB1P20700 586 aa20.43■□□□□ 0.86
PPFIA3-207ENST00000602716 GMPSP49915 693 aaPredicted RBP20.43■□□□□ 0.86
PPFIA3-207ENST00000602716 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
PPFIA3-207ENST00000602716 CLRN2A0PK11 232 aa20.43■□□□□ 0.86
PPFIA3-207ENST00000602716 FGRP09769 529 aa20.43■□□□□ 0.86
PPFIA3-207ENST00000602716 STK3Q13188 491 aa20.43■□□□□ 0.86
PPFIA3-207ENST00000602716 FGD1P98174 961 aa20.42■□□□□ 0.86
PPFIA3-207ENST00000602716 TCP10Q12799 353 aa20.42■□□□□ 0.86
PPFIA3-207ENST00000602716 TNIP1Q15025 636 aa20.42■□□□□ 0.86
PPFIA3-207ENST00000602716 RAB11FIP4Q86YS3 637 aa20.42■□□□□ 0.86
PPFIA3-207ENST00000602716 CCDC83Q8IWF9 413 aa20.42■□□□□ 0.86
PPFIA3-207ENST00000602716 RNF41Q9H4P4 317 aaPredicted RBP20.42■□□□□ 0.86
PPFIA3-207ENST00000602716 CNNM2Q9H8M5 875 aa20.42■□□□□ 0.86
PPFIA3-207ENST00000602716 SH2B2O14492 632 aaPredicted RBP20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 PTMSP20962 102 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 KRT23Q9C075 422 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 HDAC9Q9UKV0 1011 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 SOCS7O14512 581 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 ANKRD1Q15327 319 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 FAM47AQ5JRC9 791 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 SH3BP5LQ7L8J4 393 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 OGFOD1Q8N543 542 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 ISY1Q9ULR0 285 aaKnown RBP20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 WDR19Q8NEZ3 1342 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 SBF1O95248 1867 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 MYH1P12882 1939 aa20.41■□□□□ 0.86
PPFIA3-207ENST00000602716 MRE11P49959 708 aa20.4■□□□□ 0.86
PPFIA3-207ENST00000602716 DLGAP5Q15398 846 aa20.4■□□□□ 0.86
PPFIA3-207ENST00000602716 ZBED3Q96IU2 234 aaPredicted RBP20.4■□□□□ 0.86
PPFIA3-207ENST00000602716 RNF181Q9P0P0 153 aa20.4■□□□□ 0.86
PPFIA3-207ENST00000602716 ORC4O43929 436 aa20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 RANBP6O60518 1105 aaKnown RBP20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 SKOR2Q2VWA4 1001 aaPredicted RBP20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 CLEC17AQ6ZS10 378 aa20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 MICALL2Q8IY33 904 aa20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 IGDCC4Q8TDY8 1250 aa20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 IDI2Q9BXS1 227 aa20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 LY9Q9HBG7 655 aa20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 SIPA1L1O43166 1804 aa20.39■□□□□ 0.86
PPFIA3-207ENST00000602716 DDTLA6NHG4 134 aaPredicted RBP20.39■□□□□ 0.85
PPFIA3-207ENST00000602716 NMT2O60551 498 aa20.39■□□□□ 0.85
PPFIA3-207ENST00000602716 NBPF9Q3BBW0 867 aa20.39■□□□□ 0.85
PPFIA3-207ENST00000602716 MYOZ2Q9NPC6 264 aa20.39■□□□□ 0.85
PPFIA3-207ENST00000602716 SCAF8Q9UPN6 1271 aaKnown RBP20.39■□□□□ 0.85
PPFIA3-207ENST00000602716 ASTN2O75129 1339 aaPredicted RBP20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 ZNF280AP59817 542 aaPredicted RBP20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 C16orf86Q6ZW13 317 aa20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 FBXL16Q8N461 479 aa20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 ESR2Q92731 530 aa20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 PANK2Q9BZ23 570 aa20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 ZNF70Q9UC06 446 aaPredicted RBP20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 ANGEL1Q9UNK9 670 aaKnown RBP20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 DICER1Q9UPY3 1922 aaKnown RBP20.38■□□□□ 0.85
PPFIA3-207ENST00000602716 KLF18A0A0U1RQI7 1052 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 FAM196BA6NMK8 535 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 SPDYE2Q495Y8 402 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 TMEM67Q5HYA8 995 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 SAMD7Q7Z3H4 446 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 CDAN1Q8IWY9 1227 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 AMOTL1Q8IY63 956 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 NCOA5Q9HCD5 579 aaKnown RBP20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 SH2B1Q9NRF2 756 aaPredicted RBP20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 NAP1L2Q9ULW6 460 aaPredicted RBP20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 TNKSO95271 1327 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 TCP10L2B9ZVM9 353 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 WNT10BO00744 389 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 IFIT3O14879 490 aaKnown RBP20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 RASA1P20936 1047 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 RPS12P25398 132 aaKnown RBP20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 GABPAQ06546 454 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 SCRN1Q12765 414 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 RBM26Q5T8P6 1007 aaKnown RBP20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 MTMR14Q8NCE2 650 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 ZSCAN31Q96LW9 406 aaPredicted RBP20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 MYL10Q9BUA6 226 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 DNAJC18Q9H819 358 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 HPS5Q9UPZ3 1129 aa20.37■□□□□ 0.85
PPFIA3-207ENST00000602716 CNTNAP1P78357 1384 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 SLC3A2P08195 630 aaKnown RBP20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 PDIA3P30101 505 aaKnown RBP20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 CDK8P49336 464 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 PDE4BQ07343 736 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 C9orf131Q5VYM1 1079 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 GTF3C6Q969F1 213 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 TMEM87BQ96K49 555 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 RXRAP19793 462 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 EVCP57679 992 aa20.36■□□□□ 0.85
PPFIA3-207ENST00000602716 CCT2P78371 535 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms