RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	EVC	P57679	992 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	TCIRG1	Q13488	830 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	VPS18	Q9P253	973 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	OPA1	O60313	960 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	ZEB2	O60315	1214 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	STAMBP	O95630	424 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	U2AF2	P26368	475 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	RAD51AP2	Q09MP3	1159 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	TCP10	Q12799	353 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	WDR66	Q8TBY9	1149 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	SERPINA10	Q9UK55	444 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	ZNF75D	P51815	510 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	IPO4	Q8TEX9	1081 aa	Known RBP	13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	GTPBP4	Q9BZE4	634 aa	Known RBP	13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	IQCG	Q9H095	443 aa	Known RBP	13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	KIAA0232	Q92628	1395 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	ZNF521	Q96K83	1311 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	VAV2	P52735	878 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	DYM	Q7RTS9	669 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	ZNF354C	Q86Y25	554 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	CCDC77	Q9BR77	488 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	TFAP4	Q01664	338 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	PPP2R3A	Q06190	1150 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	MAEA	Q7L5Y9	396 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	TRMT44	Q8IYL2	757 aa	Known RBP	13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	TGFBRAP1	Q8WUH2	860 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	TIGD1	Q96MW7	591 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	GJA3	Q9Y6H8	435 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	SHROOM2	Q13796	1616 aa		13.55	□□□□□ -0.24
PTPN23-206	ENST00000602307	CFAP74	Q9C0B2	1584 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	LONRF3	Q496Y0	759 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	GTF3C6	Q969F1	213 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	MYOM2	P54296	1465 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	SLC1A4	P43007	532 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	BIRC3	Q13489	604 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	SELENOS	Q9BQE4	189 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	TAB2	Q9NYJ8	693 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	TBC1D7	Q9P0N9	293 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	LRWD1	Q9UFC0	647 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	FRMD4B	Q9Y2L6	1034 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	FBF1	Q8TES7	1133 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	SYNRG	Q9UMZ2	1314 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	ZFYVE16	Q7Z3T8	1539 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	CCDC169	A6NNP5	214 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	MLKL	Q8NB16	471 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	SNX29	Q8TEQ0	813 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	TM6SF1	Q9BZW5	370 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	NEO1	Q92859	1461 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	TRPM1	Q7Z4N2	1603 aa		13.54	□□□□□ -0.24
PTPN23-206	ENST00000602307	NONO	Q15233	471 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	CNNM4	Q6P4Q7	775 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	DSCC1	Q9BVC3	393 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	SLAIN2	Q9P270	581 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	USP17L12	C9JPN9	530 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	USP17L21	D6R901	530 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	KIF4A	O95239	1232 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	EPB41	P11171	864 aa	Known RBP	13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	PAK1	Q13153	545 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	BEND3	Q5T5X7	828 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	TSNARE1	Q96NA8	513 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	BLZF1	Q9H2G9	400 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	MROH5	Q6ZUA9	1318 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	ARHGEF10	O15013	1369 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	ARID4A	P29374	1257 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	LRRC24	Q50LG9	513 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	NCAPH2	Q6IBW4	605 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	DPP8	Q6V1X1	898 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	CPXCR1	Q8N123	301 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	GPT2	Q8TD30	523 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	ADD1	P35611	737 aa	Known RBP	13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	NLRP12	P59046	1061 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	POSTN	Q15063	836 aa		13.53	□□□□□ -0.24
PTPN23-206	ENST00000602307	PHKG2	P15735	406 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	POLD1	P28340	1107 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	KRT9	P35527	623 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	PPM1F	P49593	454 aa	Predicted RBP	13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	MNAT1	P51948	309 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	USH1G	Q495M9	461 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	TPCN1	Q9ULQ1	816 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307		B4DLN1	442 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	DDX39A	O00148	427 aa	Known RBP	13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	ATP2A1	O14983	1001 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	RPS8	P62241	208 aa	Known RBP	13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	GPATCH11	Q8N954	259 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	CARD6	Q9BX69	1037 aa		13.52	□□□□□ -0.24
PTPN23-206	ENST00000602307	UNC13B	O14795	1591 aa		13.52	□□□□□ -0.25
PTPN23-206	ENST00000602307	KRT5	P13647	590 aa		13.52	□□□□□ -0.25
PTPN23-206	ENST00000602307	GYG1	P46976	350 aa		13.52	□□□□□ -0.25
PTPN23-206	ENST00000602307	TNNC1	P63316	161 aa		13.52	□□□□□ -0.25
PTPN23-206	ENST00000602307	PPP1R7	Q15435	360 aa		13.52	□□□□□ -0.25
PTPN23-206	ENST00000602307	MYSM1	Q5VVJ2	828 aa		13.52	□□□□□ -0.25
PTPN23-206	ENST00000602307	DDX12P	Q92771	950 aa		13.52	□□□□□ -0.25
PTPN23-206	ENST00000602307	NAP1L4	Q99733	375 aa	Known RBP	13.52	□□□□□ -0.25
PTPN23-206	ENST00000602307	ANTXR1	Q9H6X2	564 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms