RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 SUPT16HQ9Y5B9 1047 aaKnown RBP21.24■□□□□ 0.99
IRF3-230ENST00000601809 CCL15-CCL14A0A0B4J2E2 113 aa21.23■□□□□ 0.99
IRF3-230ENST00000601809 GPR25O00155 361 aa21.23■□□□□ 0.99
IRF3-230ENST00000601809 CTNND1O60716 968 aaKnown RBP21.23■□□□□ 0.99
IRF3-230ENST00000601809 CCL15Q16663 113 aa21.23■□□□□ 0.99
IRF3-230ENST00000601809 TSHZ3Q63HK5 1081 aa21.23■□□□□ 0.99
IRF3-230ENST00000601809 NAV1Q8NEY1 1877 aa21.23■□□□□ 0.99
IRF3-230ENST00000601809 PTPRAP18433 802 aa21.22■□□□□ 0.99
IRF3-230ENST00000601809 FAM43AQ8N2R8 423 aa21.22■□□□□ 0.99
IRF3-230ENST00000601809 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
IRF3-230ENST00000601809 ZNF296Q8WUU4 475 aaPredicted RBP21.22■□□□□ 0.99
IRF3-230ENST00000601809 PI4KBQ9UBF8 816 aa21.22■□□□□ 0.99
IRF3-230ENST00000601809 HERC5Q9UII4 1024 aaKnown RBP21.22■□□□□ 0.99
IRF3-230ENST00000601809 PALD1Q9ULE6 856 aa21.22■□□□□ 0.99
IRF3-230ENST00000601809 SNAPC2Q13487 334 aa21.21■□□□□ 0.99
IRF3-230ENST00000601809 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.21■□□□□ 0.99
IRF3-230ENST00000601809 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.21■□□□□ 0.99
IRF3-230ENST00000601809 AFG3L2Q9Y4W6 797 aa21.21■□□□□ 0.99
IRF3-230ENST00000601809 MAGEB6P1A0A0J9YX57 407 aa21.2■□□□□ 0.98
IRF3-230ENST00000601809 BTBD19C9JJ37 291 aa21.2■□□□□ 0.98
IRF3-230ENST00000601809 CETPP11597 493 aa21.2■□□□□ 0.98
IRF3-230ENST00000601809 CRHR2Q13324 411 aa21.2■□□□□ 0.98
IRF3-230ENST00000601809 UBE3CQ15386 1083 aa21.2■□□□□ 0.98
IRF3-230ENST00000601809 LCORLQ8N3X6 602 aa21.2■□□□□ 0.98
IRF3-230ENST00000601809 GCC1Q96CN9 775 aa21.2■□□□□ 0.98
IRF3-230ENST00000601809 ZCCHC17Q9NP64 241 aaKnown RBP21.2■□□□□ 0.98
IRF3-230ENST00000601809 TTC41PQ6P2S7 1318 aa21.2■□□□□ 0.98
IRF3-230ENST00000601809 CXCL11O14625 94 aa21.19■□□□□ 0.98
IRF3-230ENST00000601809 CAP2P40123 477 aa21.19■□□□□ 0.98
IRF3-230ENST00000601809 JAG1P78504 1218 aa21.19■□□□□ 0.98
IRF3-230ENST00000601809 FOXP4Q8IVH2 680 aaPredicted RBP21.19■□□□□ 0.98
IRF3-230ENST00000601809 SMC5Q8IY18 1101 aa21.19■□□□□ 0.98
IRF3-230ENST00000601809 SAP30BPQ9UHR5 308 aaKnown RBP21.19■□□□□ 0.98
IRF3-230ENST00000601809 HTTP42858 3142 aa21.19■□□□□ 0.98
IRF3-230ENST00000601809 LOC285556D6RIA3 1793 aa21.18■□□□□ 0.98
IRF3-230ENST00000601809 IGHDP01880 384 aa21.18■□□□□ 0.98
IRF3-230ENST00000601809 OTUD7BQ6GQQ9 843 aa21.18■□□□□ 0.98
IRF3-230ENST00000601809 CCDC84Q86UT8 332 aaPredicted RBP21.18■□□□□ 0.98
IRF3-230ENST00000601809 KBTBD3Q8NAB2 608 aa21.18■□□□□ 0.98
IRF3-230ENST00000601809 MCOLN1Q9GZU1 580 aa21.18■□□□□ 0.98
IRF3-230ENST00000601809 ZHX2Q9Y6X8 837 aa21.18■□□□□ 0.98
IRF3-230ENST00000601809 A0A0G2JLL6 359 aaPredicted RBP21.17■□□□□ 0.98
IRF3-230ENST00000601809 CAP1Q01518 475 aa21.17■□□□□ 0.98
IRF3-230ENST00000601809 GPAT2Q6NUI2 795 aa21.17■□□□□ 0.98
IRF3-230ENST00000601809 PRRT2Q7Z6L0 340 aaPredicted RBP21.17■□□□□ 0.98
IRF3-230ENST00000601809 EHD4Q9H223 541 aa21.17■□□□□ 0.98
IRF3-230ENST00000601809 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 USP5P45974 858 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 EVX2Q03828 476 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 GABPAQ06546 454 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 SHROOM1Q2M3G4 852 aaPredicted RBP21.16■□□□□ 0.98
IRF3-230ENST00000601809 ANKRD45Q5TZF3 282 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 ANKRD23Q86SG2 305 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 GPATCH3Q96I76 525 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.16■□□□□ 0.982e-6■■■■□ 19.7
IRF3-230ENST00000601809 ARMT1Q9H993 441 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 DCP1AQ9NPI6 582 aaPredicted RBP21.16■□□□□ 0.98
IRF3-230ENST00000601809 PICK1Q9NRD5 415 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 STAP2Q9UGK3 403 aa21.16■□□□□ 0.98
IRF3-230ENST00000601809 BAZ2AQ9UIF9 1905 aaKnown RBP21.16■□□□□ 0.98
IRF3-230ENST00000601809 FKTNO75072 461 aa21.15■□□□□ 0.98
IRF3-230ENST00000601809 MX1P20591 662 aa21.15■□□□□ 0.98
IRF3-230ENST00000601809 PLCD1P51178 756 aa21.15■□□□□ 0.98
IRF3-230ENST00000601809 DGKZQ13574 1117 aa21.15■□□□□ 0.98
IRF3-230ENST00000601809 TATDN1Q6P1N9 297 aa21.15■□□□□ 0.98
IRF3-230ENST00000601809 CTU1Q7Z7A3 348 aaKnown RBP21.15■□□□□ 0.98
IRF3-230ENST00000601809 SDR42E1Q8WUS8 393 aa21.15■□□□□ 0.98
IRF3-230ENST00000601809 ABHD8Q96I13 439 aa21.15■□□□□ 0.98
IRF3-230ENST00000601809 CRNKL1Q9BZJ0 848 aaKnown RBP21.15■□□□□ 0.98
IRF3-230ENST00000601809 PUS7LQ9H0K6 701 aaKnown RBP21.15■□□□□ 0.98
IRF3-230ENST00000601809 PRKAB2O43741 272 aa21.14■□□□□ 0.97
IRF3-230ENST00000601809 GLRX3O76003 335 aaKnown RBP21.14■□□□□ 0.97
IRF3-230ENST00000601809 MBD4O95243 580 aa21.14■□□□□ 0.97
IRF3-230ENST00000601809 HLA-DOAP06340 250 aa21.14■□□□□ 0.97
IRF3-230ENST00000601809 TAF1CQ15572 869 aaPredicted RBP21.14■□□□□ 0.97
IRF3-230ENST00000601809 SLC4A8Q2Y0W8 1093 aa21.14■□□□□ 0.97
IRF3-230ENST00000601809 ZSCAN25Q6NSZ9 544 aa21.13■□□□□ 0.97
IRF3-230ENST00000601809 OSBP2Q969R2 916 aa21.13■□□□□ 0.97
IRF3-230ENST00000601809 ERC2O15083 957 aa21.12■□□□□ 0.97
IRF3-230ENST00000601809 TLR2O60603 784 aa21.12■□□□□ 0.97
IRF3-230ENST00000601809 TBC1D2Q9BYX2 928 aa21.12■□□□□ 0.97
IRF3-230ENST00000601809 RWDD1Q9H446 243 aaPredicted RBP21.12■□□□□ 0.97
IRF3-230ENST00000601809 ZFYVE28Q9HCC9 887 aa21.12■□□□□ 0.97
IRF3-230ENST00000601809 GINM1Q9NU53 330 aa21.12■□□□□ 0.97
IRF3-230ENST00000601809 SERPINB13Q9UIV8 391 aa21.12■□□□□ 0.97
IRF3-230ENST00000601809 ZSWIM8A7E2V4 1837 aa21.12■□□□□ 0.97
IRF3-230ENST00000601809 USP17L5A8MUK1 530 aa21.11■□□□□ 0.97
IRF3-230ENST00000601809 SHMT1P34896 483 aa21.11■□□□□ 0.97
IRF3-230ENST00000601809 PDE1AP54750 535 aa21.11■□□□□ 0.97
IRF3-230ENST00000601809 SH3D19Q5HYK7 790 aa21.11■□□□□ 0.97
IRF3-230ENST00000601809 TTC6Q86TZ1 520 aa21.11■□□□□ 0.97
IRF3-230ENST00000601809 WDR18Q9BV38 432 aa21.11■□□□□ 0.97
IRF3-230ENST00000601809 ATP8A2Q9NTI2 1148 aa21.11■□□□□ 0.97
IRF3-230ENST00000601809 SMIM22K7EJ46 135 aa21.1■□□□□ 0.97
IRF3-230ENST00000601809 PDHXO00330 501 aa21.1■□□□□ 0.97
IRF3-230ENST00000601809 RNF113AO15541 343 aaKnown RBP21.1■□□□□ 0.97
IRF3-230ENST00000601809 ASNSP08243 561 aa21.1■□□□□ 0.97
IRF3-230ENST00000601809 CYP2D6P10635 497 aa21.1■□□□□ 0.97
IRF3-230ENST00000601809 C17orf99Q6UX52 265 aa21.1■□□□□ 0.97
IRF3-230ENST00000601809 CRACR2BQ8N4Y2 399 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms