RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 BOLA2Q9H3K6 86 aa20.85■□□□□ 0.93
HERC3-214ENST00000601319 PICK1Q9NRD5 415 aa20.85■□□□□ 0.93
HERC3-214ENST00000601319 CRHR2Q13324 411 aa20.84■□□□□ 0.93
HERC3-214ENST00000601319 HDAC1Q13547 482 aaPredicted RBP20.84■□□□□ 0.93
HERC3-214ENST00000601319 BCL11AQ9H165 835 aa20.84■□□□□ 0.93
HERC3-214ENST00000601319 R3HDMLQ9H3Y0 253 aa20.84■□□□□ 0.93
HERC3-214ENST00000601319 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.84■□□□□ 0.93
HERC3-214ENST00000601319 BAZ2AQ9UIF9 1905 aaKnown RBP20.84■□□□□ 0.93
HERC3-214ENST00000601319 ZNF532Q9HCE3 1301 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 CXCL11O14625 94 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 FKTNO75072 461 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 SLURP2P0DP57 97 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 PTPRAP18433 802 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 DGKZQ13574 1117 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 CTU1Q7Z7A3 348 aaKnown RBP20.83■□□□□ 0.93
HERC3-214ENST00000601319 FAM43AQ8N2R8 423 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 EDC3Q96F86 508 aaKnown RBP20.83■□□□□ 0.93
HERC3-214ENST00000601319 ABHD8Q96I13 439 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.83■□□□□ 0.93
HERC3-214ENST00000601319 MCOLN1Q9GZU1 580 aa20.83■□□□□ 0.93
HERC3-214ENST00000601319 HTTP42858 3142 aa20.83■□□□□ 0.92
HERC3-214ENST00000601319 MAGEB6P1A0A0J9YX57 407 aa20.82■□□□□ 0.92
HERC3-214ENST00000601319 FAM196BA6NMK8 535 aa20.82■□□□□ 0.92
HERC3-214ENST00000601319 TTC41PQ6P2S7 1318 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 BTBD19C9JJ37 291 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 HLA-DOAP06340 250 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 ADD2P35612 726 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 USP5P45974 858 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 MOGSQ13724 837 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 TAF1CQ15572 869 aaPredicted RBP20.81■□□□□ 0.92
HERC3-214ENST00000601319 ANKRD23Q86SG2 305 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 FOXP4Q8IVH2 680 aaPredicted RBP20.81■□□□□ 0.92
HERC3-214ENST00000601319 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 PALD1Q9ULE6 856 aa20.81■□□□□ 0.92
HERC3-214ENST00000601319 CAP2P40123 477 aa20.8■□□□□ 0.92
HERC3-214ENST00000601319 GCC1Q96CN9 775 aa20.8■□□□□ 0.92
HERC3-214ENST00000601319 CRNKL1Q9BZJ0 848 aaKnown RBP20.8■□□□□ 0.92
HERC3-214ENST00000601319 EHD4Q9H223 541 aa20.8■□□□□ 0.92
HERC3-214ENST00000601319 DNAJC18Q9H819 358 aa20.8■□□□□ 0.92
HERC3-214ENST00000601319 ZFYVE28Q9HCC9 887 aa20.8■□□□□ 0.92
HERC3-214ENST00000601319 AFG3L2Q9Y4W6 797 aa20.8■□□□□ 0.92
HERC3-214ENST00000601319 ZHX2Q9Y6X8 837 aa20.8■□□□□ 0.92
HERC3-214ENST00000601319 A0A0G2JLL6 359 aaPredicted RBP20.79■□□□□ 0.92
HERC3-214ENST00000601319 UBE3CQ15386 1083 aa20.79■□□□□ 0.92
HERC3-214ENST00000601319 PKN2Q16513 984 aaKnown RBP20.79■□□□□ 0.92
HERC3-214ENST00000601319 ZSCAN25Q6NSZ9 544 aa20.79■□□□□ 0.92
HERC3-214ENST00000601319 PRRT2Q7Z6L0 340 aaPredicted RBP20.79■□□□□ 0.92
HERC3-214ENST00000601319 SAP30BPQ9UHR5 308 aaKnown RBP20.79■□□□□ 0.92
HERC3-214ENST00000601319 MGAMO43451 1857 aa20.79■□□□□ 0.92
HERC3-214ENST00000601319 CRACR2BQ8N4Y2 399 aaPredicted RBP20.78■□□□□ 0.92
HERC3-214ENST00000601319 GINM1Q9NU53 330 aa20.78■□□□□ 0.92
HERC3-214ENST00000601319 ZSWIM8A7E2V4 1837 aa20.78■□□□□ 0.92
HERC3-214ENST00000601319 SALL3Q9BXA9 1300 aa20.78■□□□□ 0.92
HERC3-214ENST00000601319 RRP1BQ14684 758 aaKnown RBP20.77■□□□□ 0.92
HERC3-214ENST00000601319 FASTKD5Q7L8L6 764 aaKnown RBP20.77■□□□□ 0.92
HERC3-214ENST00000601319 TTC6Q86TZ1 520 aa20.77■□□□□ 0.92
HERC3-214ENST00000601319 LCORLQ8N3X6 602 aa20.77■□□□□ 0.92
HERC3-214ENST00000601319 KBTBD3Q8NAB2 608 aa20.77■□□□□ 0.92
HERC3-214ENST00000601319 ERO1AQ96HE7 468 aa20.77■□□□□ 0.92
HERC3-214ENST00000601319 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.92
HERC3-214ENST00000601319 TLR2O60603 784 aa20.76■□□□□ 0.91
HERC3-214ENST00000601319 ASNSP08243 561 aa20.76■□□□□ 0.91
HERC3-214ENST00000601319 SERPINB13Q9UIV8 391 aa20.76■□□□□ 0.91
HERC3-214ENST00000601319 TAOK2Q9UL54 1235 aa20.76■□□□□ 0.91
HERC3-214ENST00000601319 SLC45A1Q9Y2W3 748 aa20.76■□□□□ 0.91
HERC3-214ENST00000601319 ADGRA2Q96PE1 1338 aa20.76■□□□□ 0.91
HERC3-214ENST00000601319 PDHXO00330 501 aa20.75■□□□□ 0.91
HERC3-214ENST00000601319 ERC2O15083 957 aa20.75■□□□□ 0.91
HERC3-214ENST00000601319 GLRX3O76003 335 aaKnown RBP20.75■□□□□ 0.91
HERC3-214ENST00000601319 MBD4O95243 580 aa20.75■□□□□ 0.91
HERC3-214ENST00000601319 MX1P20591 662 aa20.75■□□□□ 0.91
HERC3-214ENST00000601319 SP3Q02447 781 aa20.75■□□□□ 0.91
HERC3-214ENST00000601319 TSHZ3Q63HK5 1081 aa20.75■□□□□ 0.91
HERC3-214ENST00000601319 GPAT2Q6NUI2 795 aa20.75■□□□□ 0.91
HERC3-214ENST00000601319 PI4K2BQ8TCG2 481 aa20.75■□□□□ 0.91
HERC3-214ENST00000601319 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.75■□□□□ 0.91
HERC3-214ENST00000601319 USP17L5A8MUK1 530 aa20.74■□□□□ 0.91
HERC3-214ENST00000601319 CAPN15O75808 1086 aa20.74■□□□□ 0.91
HERC3-214ENST00000601319 TATDN1Q6P1N9 297 aa20.74■□□□□ 0.91
HERC3-214ENST00000601319 ZNF280CQ8ND82 737 aa20.74■□□□□ 0.91
HERC3-214ENST00000601319 ARMT1Q9H993 441 aa20.74■□□□□ 0.91
HERC3-214ENST00000601319 AS3MTQ9HBK9 375 aa20.74■□□□□ 0.91
HERC3-214ENST00000601319 DCP1AQ9NPI6 582 aaPredicted RBP20.74■□□□□ 0.91
HERC3-214ENST00000601319 ATP8A2Q9NTI2 1148 aa20.74■□□□□ 0.91
HERC3-214ENST00000601319 RBBP6Q7Z6E9 1792 aaKnown RBP20.74■□□□□ 0.91
HERC3-214ENST00000601319 TRIM75PA6NK02 468 aa20.73■□□□□ 0.91
HERC3-214ENST00000601319 FBXO46Q6PJ61 603 aaPredicted RBP20.73■□□□□ 0.91
HERC3-214ENST00000601319 CCDC84Q86UT8 332 aaPredicted RBP20.73■□□□□ 0.91
HERC3-214ENST00000601319 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
HERC3-214ENST00000601319 OTUD7AQ8TE49 926 aaPredicted RBP20.73■□□□□ 0.91
HERC3-214ENST00000601319 PARK7Q99497 189 aaKnown RBP20.73■□□□□ 0.91
HERC3-214ENST00000601319 WDR18Q9BV38 432 aa20.73■□□□□ 0.91
HERC3-214ENST00000601319 ZBTB47Q9UFB7 747 aaPredicted RBP20.73■□□□□ 0.91
HERC3-214ENST00000601319 ZBTB21Q9ULJ3 1066 aa20.73■□□□□ 0.91
HERC3-214ENST00000601319 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
HERC3-214ENST00000601319 ZFYP08048 801 aaPredicted RBP20.72■□□□□ 0.91
HERC3-214ENST00000601319 SLC4A8Q2Y0W8 1093 aa20.72■□□□□ 0.91
HERC3-214ENST00000601319 SLFNL1Q499Z3 407 aa20.72■□□□□ 0.91
HERC3-214ENST00000601319 ANKRD45Q5TZF3 282 aa20.72■□□□□ 0.91
HERC3-214ENST00000601319 SMC5Q8IY18 1101 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms