RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	BTBD19	C9JJ37	291 aa		18.8	■□□□□ 0.6
PLD3-223	ENST00000600948	PTPRA	P18433	802 aa		18.8	■□□□□ 0.6
PLD3-223	ENST00000600948	SLC9C2	Q5TAH2	1124 aa		18.8	■□□□□ 0.6
PLD3-223	ENST00000600948	PICK1	Q9NRD5	415 aa		18.8	■□□□□ 0.6
PLD3-223	ENST00000600948	PAG1	Q9NWQ8	432 aa		18.8	■□□□□ 0.6
PLD3-223	ENST00000600948	HERC5	Q9UII4	1024 aa	Known RBP	18.8	■□□□□ 0.6
PLD3-223	ENST00000600948	TCRBV5S4A2T	A0A5A2	114 aa		18.79	■□□□□ 0.6
PLD3-223	ENST00000600948	TAF1C	Q15572	869 aa	Predicted RBP	18.79	■□□□□ 0.6
PLD3-223	ENST00000600948	RIOK1	Q9BRS2	568 aa	Known RBP	18.79	■□□□□ 0.6
PLD3-223	ENST00000600948	ZCCHC17	Q9NP64	241 aa	Known RBP	18.79	■□□□□ 0.6
PLD3-223	ENST00000600948	PI4KB	Q9UBF8	816 aa		18.79	■□□□□ 0.6
PLD3-223	ENST00000600948	ZNF532	Q9HCE3	1301 aa		18.78	■□□□□ 0.6
PLD3-223	ENST00000600948	CXCL11	O14625	94 aa		18.78	■□□□□ 0.6
PLD3-223	ENST00000600948	MOGS	Q13724	837 aa		18.78	■□□□□ 0.6
PLD3-223	ENST00000600948	METTL16	Q86W50	562 aa	Known RBP	18.78	■□□□□ 0.6
PLD3-223	ENST00000600948	ECHDC1	Q9NTX5	307 aa		18.78	■□□□□ 0.6
PLD3-223	ENST00000600948	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.78	■□□□□ 0.6
PLD3-223	ENST00000600948	PALD1	Q9ULE6	856 aa		18.78	■□□□□ 0.6
PLD3-223	ENST00000600948	ZHX2	Q9Y6X8	837 aa		18.78	■□□□□ 0.6
PLD3-223	ENST00000600948	RRP1B	Q14684	758 aa	Known RBP	18.77	■□□□□ 0.6
PLD3-223	ENST00000600948	DNAJC18	Q9H819	358 aa		18.77	■□□□□ 0.6
PLD3-223	ENST00000600948	ZFYVE28	Q9HCC9	887 aa		18.77	■□□□□ 0.6
PLD3-223	ENST00000600948	SAP30BP	Q9UHR5	308 aa	Known RBP	18.77	■□□□□ 0.6
PLD3-223	ENST00000600948	AFG3L2	Q9Y4W6	797 aa		18.77	■□□□□ 0.6
PLD3-223	ENST00000600948	MAGEB6P1	A0A0J9YX57	407 aa		18.76	■□□□□ 0.59
PLD3-223	ENST00000600948	ADD2	P35612	726 aa		18.76	■□□□□ 0.59
PLD3-223	ENST00000600948	CAP2	P40123	477 aa		18.76	■□□□□ 0.59
PLD3-223	ENST00000600948	USP5	P45974	858 aa		18.76	■□□□□ 0.59
PLD3-223	ENST00000600948	ANKRD23	Q86SG2	305 aa		18.76	■□□□□ 0.59
PLD3-223	ENST00000600948	CCDC84	Q86UT8	332 aa	Predicted RBP	18.76	■□□□□ 0.59
PLD3-223	ENST00000600948		A0A0G2JLL6	359 aa	Predicted RBP	18.75	■□□□□ 0.59
PLD3-223	ENST00000600948	HLA-DOA	P06340	250 aa		18.75	■□□□□ 0.59
PLD3-223	ENST00000600948	PKN2	Q16513	984 aa	Known RBP	18.75	■□□□□ 0.59
PLD3-223	ENST00000600948	PRRT2	Q7Z6L0	340 aa	Predicted RBP	18.75	■□□□□ 0.59
PLD3-223	ENST00000600948	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.75	■□□□□ 0.59
PLD3-223	ENST00000600948	GPATCH3	Q96I76	525 aa		18.75	■□□□□ 0.59
PLD3-223	ENST00000600948	LOC285556	D6RIA3	1793 aa		18.75	■□□□□ 0.59
PLD3-223	ENST00000600948	SP3	Q02447	781 aa		18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	SLC4A8	Q2Y0W8	1093 aa		18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	SLFNL1	Q499Z3	407 aa		18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	TSHZ3	Q63HK5	1081 aa		18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	GPAT2	Q6NUI2	795 aa		18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	CD99L2	Q8TCZ2	262 aa		18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	ERO1A	Q96HE7	468 aa		18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	ZSWIM8	A7E2V4	1837 aa		18.74	■□□□□ 0.59
PLD3-223	ENST00000600948	PDHX	O00330	501 aa		18.73	■□□□□ 0.59
PLD3-223	ENST00000600948	TLR2	O60603	784 aa		18.73	■□□□□ 0.59
PLD3-223	ENST00000600948	CHGB	P05060	677 aa		18.73	■□□□□ 0.59
PLD3-223	ENST00000600948	HDAC1	Q13547	482 aa	Predicted RBP	18.73	■□□□□ 0.59
PLD3-223	ENST00000600948	AAMP	Q13685	434 aa		18.73	■□□□□ 0.59
PLD3-223	ENST00000600948	LCORL	Q8N3X6	602 aa		18.73	■□□□□ 0.59
PLD3-223	ENST00000600948	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.73	■□□□□ 0.59
PLD3-223	ENST00000600948	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.73	■□□□□ 0.59
PLD3-223	ENST00000600948	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.73	■□□□□ 0.59	1e-7	■□□□□ 11
PLD3-223	ENST00000600948	TRIM75P	A6NK02	468 aa		18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	CCDC85C	A6NKD9	419 aa		18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	JAG1	P78504	1218 aa		18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	CAP1	Q01518	475 aa		18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	FASTKD5	Q7L8L6	764 aa	Known RBP	18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	OTOP1	Q7RTM1	612 aa		18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	TRIM34	Q9BYJ4	488 aa		18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	EHD4	Q9H223	541 aa		18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	ADGRA2	Q96PE1	1338 aa		18.72	■□□□□ 0.59
PLD3-223	ENST00000600948	USP17L5	A8MUK1	530 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	UBE3C	Q15386	1083 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	GADL1	Q6ZQY3	521 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	TTC6	Q86TZ1	520 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	TBC1D2	Q9BYX2	928 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	ARMT1	Q9H993	441 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	HPS5	Q9UPZ3	1129 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	TRIM17	Q9Y577	477 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	TTC41P	Q6P2S7	1318 aa		18.71	■□□□□ 0.59
PLD3-223	ENST00000600948	MBD4	O95243	580 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	GDF11	O95390	407 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	SPP2	Q13103	211 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	ZSCAN25	Q6NSZ9	544 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	C17orf99	Q6UX52	265 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	KBTBD3	Q8NAB2	608 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	ZNF280C	Q8ND82	737 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	SDR42E1	Q8WUS8	393 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	GINM1	Q9NU53	330 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	SERPINB13	Q9UIV8	391 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	MYH8	P13535	1937 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	SALL3	Q9BXA9	1300 aa		18.7	■□□□□ 0.58
PLD3-223	ENST00000600948	ASNS	P08243	561 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	PLCD1	P51178	756 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	TATDN1	Q6P1N9	297 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	EXOC6	Q8TAG9	804 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	PI4K2B	Q8TCG2	481 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	GCC1	Q96CN9	775 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	WDR18	Q9BV38	432 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	ZBTB21	Q9ULJ3	1066 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	SLC45A1	Q9Y2W3	748 aa		18.69	■□□□□ 0.58
PLD3-223	ENST00000600948	PRKAB2	O43741	272 aa		18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	POLR3D	P05423	398 aa	Predicted RBP	18.68	■□□□□ 0.58

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