RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 HERC5Q9UII4 1024 aaKnown RBP34.04■■■■□ 3.04
SSBP4-206ENST00000599699 IRF6O14896 467 aa34.03■■■■□ 3.04
SSBP4-206ENST00000599699 TBC1D8O95759 1140 aa34.03■■■■□ 3.04
SSBP4-206ENST00000599699 ALDH1A1P00352 501 aa34.03■■■■□ 3.04
SSBP4-206ENST00000599699 UBE3CQ15386 1083 aa34.03■■■■□ 3.04
SSBP4-206ENST00000599699 OTUD7BQ6GQQ9 843 aa34.03■■■■□ 3.04
SSBP4-206ENST00000599699 ARMT1Q9H993 441 aa34.03■■■■□ 3.04
SSBP4-206ENST00000599699 CCL15-CCL14A0A0B4J2E2 113 aa34.02■■■■□ 3.04
SSBP4-206ENST00000599699 CTNND1O60716 968 aaKnown RBP34.02■■■■□ 3.04
SSBP4-206ENST00000599699 CHGBP05060 677 aa34.02■■■■□ 3.04
SSBP4-206ENST00000599699 CCL15Q16663 113 aa34.02■■■■□ 3.04
SSBP4-206ENST00000599699 LCORLQ8N3X6 602 aa34.02■■■■□ 3.04
SSBP4-206ENST00000599699 MS4A4AQ96JQ5 239 aa34.02■■■■□ 3.04
SSBP4-206ENST00000599699 IGF2BP3O00425 579 aaKnown RBP eCLIP34.01■■■■□ 3.03
SSBP4-206ENST00000599699 MBD4O95243 580 aa34.01■■■■□ 3.03
SSBP4-206ENST00000599699 SNAPC2Q13487 334 aa34.01■■■■□ 3.03
SSBP4-206ENST00000599699 TESPA1A2RU30 521 aaPredicted RBP34■■■■□ 3.03
SSBP4-206ENST00000599699 CETPP11597 493 aa34■■■■□ 3.03
SSBP4-206ENST00000599699 FOXP4Q8IVH2 680 aaPredicted RBP34■■■■□ 3.03
SSBP4-206ENST00000599699 SALL3Q9BXA9 1300 aa34■■■■□ 3.03
SSBP4-206ENST00000599699 CDK5RAP2Q96SN8 1893 aa33.99■■■■□ 3.03
SSBP4-206ENST00000599699 BRI3BPQ8WY22 251 aa33.99■■■■□ 3.03
SSBP4-206ENST00000599699 FOCADQ5VW36 1801 aa33.98■■■■□ 3.03
SSBP4-206ENST00000599699 LRRFIP1Q32MZ4 808 aaKnown RBP33.98■■■■□ 3.03
SSBP4-206ENST00000599699 CHD1LQ86WJ1 897 aa33.98■■■■□ 3.03
SSBP4-206ENST00000599699 TNS4Q8IZW8 715 aa33.98■■■■□ 3.03
SSBP4-206ENST00000599699 SDR42E1Q8WUS8 393 aa33.98■■■■□ 3.03
SSBP4-206ENST00000599699 PTPN18Q99952 460 aa33.98■■■■□ 3.03
SSBP4-206ENST00000599699 ZHX2Q9Y6X8 837 aa33.98■■■■□ 3.03
SSBP4-206ENST00000599699 PTPRAP18433 802 aa33.97■■■■□ 3.03
SSBP4-206ENST00000599699 PDE1AP54750 535 aa33.97■■■■□ 3.03
SSBP4-206ENST00000599699 TTC6Q86TZ1 520 aa33.97■■■■□ 3.03
SSBP4-206ENST00000599699 STAP2Q9UGK3 403 aa33.97■■■■□ 3.03
SSBP4-206ENST00000599699 RNF113AO15541 343 aaKnown RBP33.96■■■■□ 3.03
SSBP4-206ENST00000599699 POLR3DP05423 398 aaPredicted RBP33.96■■■■□ 3.03
SSBP4-206ENST00000599699 NUCB1Q02818 461 aa33.96■■■■□ 3.03
SSBP4-206ENST00000599699 FSD1Q9BTV5 496 aa33.96■■■■□ 3.03
SSBP4-206ENST00000599699 MCM9Q9NXL9 1143 aa33.96■■■■□ 3.03
SSBP4-206ENST00000599699 ZFYP08048 801 aaPredicted RBP33.95■■■■□ 3.03
SSBP4-206ENST00000599699 PUS7LQ9H0K6 701 aaKnown RBP33.95■■■■□ 3.03
SSBP4-206ENST00000599699 CAP2P40123 477 aa33.94■■■■□ 3.02
SSBP4-206ENST00000599699 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.94■■■■□ 3.02
SSBP4-206ENST00000599699 KCNH4Q9UQ05 1017 aa33.94■■■■□ 3.02
SSBP4-206ENST00000599699 PRKAB2O43741 272 aa33.93■■■■□ 3.02
SSBP4-206ENST00000599699 METTL16Q86W50 562 aaKnown RBP33.93■■■■□ 3.02
SSBP4-206ENST00000599699 DNAJC18Q9H819 358 aa33.93■■■■□ 3.02
SSBP4-206ENST00000599699 DCP1AQ9NPI6 582 aaPredicted RBP33.93■■■■□ 3.02
SSBP4-206ENST00000599699 SERPINB13Q9UIV8 391 aa33.93■■■■□ 3.02
SSBP4-206ENST00000599699 MYH7P12883 1935 aa33.92■■■■□ 3.02
SSBP4-206ENST00000599699 RRP1BQ14684 758 aaKnown RBP33.92■■■■□ 3.02
SSBP4-206ENST00000599699 CCDC84Q86UT8 332 aaPredicted RBP33.92■■■■□ 3.02
SSBP4-206ENST00000599699 APPBP2Q92624 585 aa33.92■■■■□ 3.02
SSBP4-206ENST00000599699 DDRGK1Q96HY6 314 aa33.92■■■■□ 3.02
SSBP4-206ENST00000599699 CFHR5Q9BXR6 569 aa33.92■■■■□ 3.02
SSBP4-206ENST00000599699 R3HDMLQ9H3Y0 253 aa33.92■■■■□ 3.02
SSBP4-206ENST00000599699 SLC4A4Q9Y6R1 1079 aa33.92■■■■□ 3.02
SSBP4-206ENST00000599699 MYH1P12882 1939 aa33.91■■■■□ 3.02
SSBP4-206ENST00000599699 LAMB1P07942 1786 aa33.91■■■■□ 3.02
SSBP4-206ENST00000599699 CXCL11O14625 94 aa33.91■■■■□ 3.02
SSBP4-206ENST00000599699 FAM43AQ8N2R8 423 aa33.91■■■■□ 3.02
SSBP4-206ENST00000599699 EHD4Q9H223 541 aa33.91■■■■□ 3.02
SSBP4-206ENST00000599699 ATP8A2Q9NTI2 1148 aa33.91■■■■□ 3.02
SSBP4-206ENST00000599699 GPR25O00155 361 aa33.9■■■■□ 3.02
SSBP4-206ENST00000599699 PLCD1P51178 756 aa33.9■■■■□ 3.02
SSBP4-206ENST00000599699 AFG3L2Q9Y4W6 797 aa33.9■■■■□ 3.02
SSBP4-206ENST00000599699 DOCK1Q14185 1865 aa33.89■■■■□ 3.02
SSBP4-206ENST00000599699 SIPA1L1O43166 1804 aa33.89■■■■□ 3.02
SSBP4-206ENST00000599699 TRIM75PA6NK02 468 aa33.89■■■■□ 3.02
SSBP4-206ENST00000599699 BTBD19C9JJ37 291 aa33.89■■■■□ 3.02
SSBP4-206ENST00000599699 CRHR2Q13324 411 aa33.89■■■■□ 3.02
SSBP4-206ENST00000599699 TAF1CQ15572 869 aaPredicted RBP33.89■■■■□ 3.02
SSBP4-206ENST00000599699 OSBP2Q969R2 916 aa33.89■■■■□ 3.02
SSBP4-206ENST00000599699 CASP8AP2Q9UKL3 1982 aa33.89■■■■□ 3.02
SSBP4-206ENST00000599699 GDF11O95390 407 aa33.88■■■■□ 3.01
SSBP4-206ENST00000599699 ZNF296Q8WUU4 475 aaPredicted RBP33.88■■■■□ 3.01
SSBP4-206ENST00000599699 EVI5LQ96CN4 794 aa33.88■■■■□ 3.01
SSBP4-206ENST00000599699 AMOTL1Q8IY63 956 aa33.87■■■■□ 3.01
SSBP4-206ENST00000599699 STRBPQ96SI9 672 aaKnown RBP33.87■■■■□ 3.01
SSBP4-206ENST00000599699 NAV1Q8NEY1 1877 aa33.86■■■■□ 3.01
SSBP4-206ENST00000599699 USP17L5A8MUK1 530 aa33.86■■■■□ 3.01
SSBP4-206ENST00000599699 ASNSP08243 561 aa33.86■■■■□ 3.01
SSBP4-206ENST00000599699 CYP2D6P10635 497 aa33.86■■■■□ 3.01
SSBP4-206ENST00000599699 ZFYVE28Q9HCC9 887 aa33.86■■■■□ 3.01
SSBP4-206ENST00000599699 GADL1Q6ZQY3 521 aa33.85■■■■□ 3.01
SSBP4-206ENST00000599699 FASTKD5Q7L8L6 764 aaKnown RBP33.85■■■■□ 3.01
SSBP4-206ENST00000599699 PLEKHM2Q8IWE5 1019 aa33.85■■■■□ 3.01
SSBP4-206ENST00000599699 A0A0G2JLL6 359 aaPredicted RBP33.84■■■■□ 3.01
SSBP4-206ENST00000599699 TRIM6-TRIM34B2RNG4 842 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 M0R2C6 588 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 GPAA1O43292 621 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 FKTNO75072 461 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 SPP2Q13103 211 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 NOM1Q5C9Z4 860 aaKnown RBP33.84■■■■□ 3.01
SSBP4-206ENST00000599699 PRRT2Q7Z6L0 340 aaPredicted RBP33.84■■■■□ 3.01
SSBP4-206ENST00000599699 ANKRD23Q86SG2 305 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 ZNF280CQ8ND82 737 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 TBC1D2Q9BYX2 928 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 AS3MTQ9HBK9 375 aa33.84■■■■□ 3.01
SSBP4-206ENST00000599699 ZCCHC17Q9NP64 241 aaKnown RBP33.84■■■■□ 3.01
SSBP4-206ENST00000599699 SHROOM1Q2M3G4 852 aaPredicted RBP33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms