RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 FAM13AO94988 1023 aa16.73■□□□□ 0.27
SYMPK-213ENST00000599460 FAM160A1Q05DH4 1040 aa16.73■□□□□ 0.27
SYMPK-213ENST00000599460 CERKQ8TCT0 537 aa16.73■□□□□ 0.27
SYMPK-213ENST00000599460 COL15A1P39059 1388 aa16.73■□□□□ 0.27
SYMPK-213ENST00000599460 UQCRHLA0A096LP55 91 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 UQCRHP07919 91 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 SPAG1Q07617 926 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 USH1GQ495M9 461 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 ARHGAP27Q6ZUM4 889 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 ZNF589Q86UQ0 364 aaPredicted RBP16.72■□□□□ 0.27
SYMPK-213ENST00000599460 TPCN1Q9ULQ1 816 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 KIF4BQ2VIQ3 1234 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 CMTR1Q8N1G2 835 aaKnown RBP16.72■□□□□ 0.27
SYMPK-213ENST00000599460 GLT8D2Q9H1C3 349 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 TMX1Q9H3N1 280 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 GRAPQ13588 217 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
SYMPK-213ENST00000599460 VPS54Q9P1Q0 977 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 NARFQ9UHQ1 456 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 TNKSO95271 1327 aa16.72■□□□□ 0.27
SYMPK-213ENST00000599460 ERLIN1O75477 346 aa16.71■□□□□ 0.27
SYMPK-213ENST00000599460 STX17P56962 302 aa16.71■□□□□ 0.27
SYMPK-213ENST00000599460 KIF18AQ8NI77 898 aa16.71■□□□□ 0.27
SYMPK-213ENST00000599460 BSDC1Q9NW68 430 aaPredicted RBP16.71■□□□□ 0.27
SYMPK-213ENST00000599460 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
SYMPK-213ENST00000599460 ARID4AP29374 1257 aaPredicted RBP16.71■□□□□ 0.27
SYMPK-213ENST00000599460 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
SYMPK-213ENST00000599460 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.71■□□□□ 0.276e-7■■■■□ 19.3
SYMPK-213ENST00000599460 ADD2P35612 726 aa16.71■□□□□ 0.27
SYMPK-213ENST00000599460 PLCD1P51178 756 aa16.71■□□□□ 0.27
SYMPK-213ENST00000599460 NONOQ15233 471 aaKnown RBP eCLIP16.71■□□□□ 0.27
SYMPK-213ENST00000599460 DBNDD1Q9H9R9 158 aa16.71■□□□□ 0.27
SYMPK-213ENST00000599460 URI1O94763 535 aaPredicted RBP16.71■□□□□ 0.26
SYMPK-213ENST00000599460 RBM10P98175 930 aaKnown RBP16.71■□□□□ 0.26
SYMPK-213ENST00000599460 IQGAP1P46940 1657 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 KRT13P13646 458 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 DNA2P51530 1060 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 SV2BQ7L1I2 683 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 CPXCR1Q8N123 301 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 BACH1O14867 736 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 TXKP42681 527 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 KRT25Q7Z3Z0 450 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 MMP10P09238 476 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
SYMPK-213ENST00000599460 DYNLL1P63167 89 aaKnown RBP16.7■□□□□ 0.26
SYMPK-213ENST00000599460 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 KCNH3Q9ULD8 1083 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 CHMP2AO43633 222 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 SPECC1Q5M775 1068 aa16.7■□□□□ 0.26
SYMPK-213ENST00000599460 C16orf45Q96MC5 204 aaPredicted RBP16.7■□□□□ 0.26
SYMPK-213ENST00000599460 PFKFB2O60825 505 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 LEO1Q8WVC0 666 aaPredicted RBP16.69■□□□□ 0.26
SYMPK-213ENST00000599460 ATP8A2Q9NTI2 1148 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 ZBED4O75132 1171 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 CETN2P41208 172 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 UBXN4Q92575 508 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 ADGRB1O14514 1584 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 TNNT1P13805 278 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 GPR162Q16538 588 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 BICDL2A1A5D9 508 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 CERKLQ49MI3 558 aaPredicted RBP16.69■□□□□ 0.26
SYMPK-213ENST00000599460 EAPPQ56P03 285 aaPredicted RBP16.69■□□□□ 0.26
SYMPK-213ENST00000599460 USP37Q86T82 979 aa16.69■□□□□ 0.26
SYMPK-213ENST00000599460 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
SYMPK-213ENST00000599460 TBC1D9BQ66K14 1250 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 CUTAO60888 179 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 NPR1P16066 1061 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
SYMPK-213ENST00000599460 PNMA1Q8ND90 353 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 TECPR2O15040 1411 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 ADD1P35611 737 aaKnown RBP16.68■□□□□ 0.26
SYMPK-213ENST00000599460 KIFC2Q96AC6 838 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 PUS7LQ9H0K6 701 aaKnown RBP16.68■□□□□ 0.26
SYMPK-213ENST00000599460 HOMER2Q9NSB8 354 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 PUF60Q9UHX1 559 aaKnown RBP16.68■□□□□ 0.26
SYMPK-213ENST00000599460 FRMPD2Q68DX3 1309 aaPredicted RBP16.68■□□□□ 0.26
SYMPK-213ENST00000599460 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
SYMPK-213ENST00000599460 RRP9O43818 475 aaKnown RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 LRRC47Q8N1G4 583 aaKnown RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 PI4K2BQ8TCG2 481 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 ARHGEF1Q92888 912 aaKnown RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 CYP21A2P08686 494 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 RASGRF1Q13972 1273 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 SPAG5Q96R06 1193 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 GOLGA6L10A6NI86 522 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 MYCLP12524 364 aaPredicted RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 CFBP00751 764 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms