RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 SHROOM1Q2M3G4 852 aaPredicted RBP23.72■■□□□ 1.39
IRF3-222ENST00000599144 SH3RF3Q8TEJ3 882 aaPredicted RBP23.72■■□□□ 1.39
IRF3-222ENST00000599144 DIS3LQ8TF46 1054 aaKnown RBP23.72■■□□□ 1.39
IRF3-222ENST00000599144 JAG1P78504 1218 aa23.71■■□□□ 1.39
IRF3-222ENST00000599144 TRIM32Q13049 653 aa23.71■■□□□ 1.39
IRF3-222ENST00000599144 IRF5Q13568 498 aa23.71■■□□□ 1.39
IRF3-222ENST00000599144 TEX11Q8IYF3 940 aa23.71■■□□□ 1.39
IRF3-222ENST00000599144 PXYLP1Q8TE99 480 aa23.71■■□□□ 1.39
IRF3-222ENST00000599144 CLUAP1Q96AJ1 413 aa23.71■■□□□ 1.39
IRF3-222ENST00000599144 DOCK1Q14185 1865 aa23.7■■□□□ 1.39
IRF3-222ENST00000599144 TRIOBPQ9H2D6 2365 aa23.7■■□□□ 1.38
IRF3-222ENST00000599144 ZNF280CQ8ND82 737 aa23.7■■□□□ 1.38
IRF3-222ENST00000599144 FRAT1Q92837 279 aaPredicted RBP23.7■■□□□ 1.38
IRF3-222ENST00000599144 COA7Q96BR5 231 aa23.7■■□□□ 1.38
IRF3-222ENST00000599144 PRO3102Q9H379 93 aa23.7■■□□□ 1.38
IRF3-222ENST00000599144 BCAR3O75815 825 aa23.69■■□□□ 1.38
IRF3-222ENST00000599144 LDHCP07864 332 aa23.69■■□□□ 1.38
IRF3-222ENST00000599144 TRIM27P14373 513 aa23.69■■□□□ 1.38
IRF3-222ENST00000599144 ARID4AP29374 1257 aaPredicted RBP23.69■■□□□ 1.38
IRF3-222ENST00000599144 CAP2P40123 477 aa23.69■■□□□ 1.38
IRF3-222ENST00000599144 GSTO1P78417 241 aa23.69■■□□□ 1.38
IRF3-222ENST00000599144 FAM110CQ1W6H9 321 aa23.69■■□□□ 1.38
IRF3-222ENST00000599144 PAWRQ96IZ0 340 aaKnown RBP23.69■■□□□ 1.38
IRF3-222ENST00000599144 LRP2BPQ9P2M1 347 aa23.69■■□□□ 1.38
IRF3-222ENST00000599144 NR2E3Q9Y5X4 410 aa23.69■■□□□ 1.38
IRF3-222ENST00000599144 PHIPQ8WWQ0 1821 aa23.68■■□□□ 1.38
IRF3-222ENST00000599144 PROCA1Q8NCQ7 364 aaPredicted RBP23.68■■□□□ 1.38
IRF3-222ENST00000599144 ARHGAP45Q92619 1136 aa23.68■■□□□ 1.38
IRF3-222ENST00000599144 ASCC2Q9H1I8 757 aaPredicted RBP23.68■■□□□ 1.38
IRF3-222ENST00000599144 PAK6Q9NQU5 681 aaPredicted RBP23.68■■□□□ 1.38
IRF3-222ENST00000599144 AATFQ9NY61 560 aaKnown RBP eCLIP23.68■■□□□ 1.38
IRF3-222ENST00000599144 PNMA3Q9UL41 463 aa23.68■■□□□ 1.38
IRF3-222ENST00000599144 CEP290O15078 2479 aa23.67■■□□□ 1.38
IRF3-222ENST00000599144 MGAMO43451 1857 aa23.67■■□□□ 1.38
IRF3-222ENST00000599144 EVI5O60447 810 aa23.67■■□□□ 1.38
IRF3-222ENST00000599144 NPM3O75607 178 aaKnown RBP23.67■■□□□ 1.38
IRF3-222ENST00000599144 GNAI2P04899 355 aa23.67■■□□□ 1.38
IRF3-222ENST00000599144 G3BP1Q13283 466 aaKnown RBP eCLIP23.67■■□□□ 1.38
IRF3-222ENST00000599144 MAPKAPK5Q8IW41 473 aa23.67■■□□□ 1.38
IRF3-222ENST00000599144 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.67■■□□□ 1.382e-7■■■□□ 14.6
IRF3-222ENST00000599144 USP17L5A8MUK1 530 aa23.66■■□□□ 1.38
IRF3-222ENST00000599144 ADGRA1Q86SQ6 560 aa23.66■■□□□ 1.38
IRF3-222ENST00000599144 STAP2Q9UGK3 403 aa23.66■■□□□ 1.38
IRF3-222ENST00000599144 SOX1O00570 391 aaPredicted RBP23.65■■□□□ 1.38
IRF3-222ENST00000599144 MTMR2Q13614 643 aa23.65■■□□□ 1.38
IRF3-222ENST00000599144 DBNDD2Q9BQY9 259 aa23.65■■□□□ 1.38
IRF3-222ENST00000599144 CRISPLD2Q9H0B8 497 aa23.65■■□□□ 1.38
IRF3-222ENST00000599144 DNAJC18Q9H819 358 aa23.65■■□□□ 1.38
IRF3-222ENST00000599144 GJD2Q9UKL4 321 aa23.65■■□□□ 1.38
IRF3-222ENST00000599144 PTPRFP10586 1907 aa23.65■■□□□ 1.38
IRF3-222ENST00000599144 GDF11O95390 407 aa23.64■■□□□ 1.37
IRF3-222ENST00000599144 TGFBRAP1Q8WUH2 860 aa23.64■■□□□ 1.37
IRF3-222ENST00000599144 UQCRFS1P1P0C7P4 283 aa23.63■■□□□ 1.37
IRF3-222ENST00000599144 GCLCP48506 637 aaPredicted RBP23.63■■□□□ 1.37
IRF3-222ENST00000599144 SH3D19Q5HYK7 790 aa23.63■■□□□ 1.37
IRF3-222ENST00000599144 TTC39AQ5SRH9 613 aa23.63■■□□□ 1.37
IRF3-222ENST00000599144 NAA16Q6N069 864 aaPredicted RBP23.63■■□□□ 1.37
IRF3-222ENST00000599144 ATF7IPQ6VMQ6 1270 aa23.63■■□□□ 1.37
IRF3-222ENST00000599144 C1orf115Q9H7X2 142 aa23.63■■□□□ 1.37
IRF3-222ENST00000599144 SAP30BPQ9UHR5 308 aaKnown RBP23.63■■□□□ 1.37
IRF3-222ENST00000599144 COL2A1P02458 1487 aaPredicted RBP23.62■■□□□ 1.37
IRF3-222ENST00000599144 HMGCRP04035 888 aa23.62■■□□□ 1.37
IRF3-222ENST00000599144 CYP2B6P20813 491 aa23.62■■□□□ 1.37
IRF3-222ENST00000599144 C7orf61Q8IZ16 206 aa23.62■■□□□ 1.37
IRF3-222ENST00000599144 TMEM57Q8N5G2 664 aa23.62■■□□□ 1.37
IRF3-222ENST00000599144 LRCH3Q96II8 777 aa23.62■■□□□ 1.37
IRF3-222ENST00000599144 P2RX7Q99572 595 aaKnown RBP23.62■■□□□ 1.37
IRF3-222ENST00000599144 NOL10Q9BSC4 688 aaKnown RBP23.62■■□□□ 1.37
IRF3-222ENST00000599144 TXNRD2Q9NNW7 524 aa23.62■■□□□ 1.37
IRF3-222ENST00000599144 PALD1Q9ULE6 856 aa23.62■■□□□ 1.37
IRF3-222ENST00000599144 ZMYND8Q9ULU4 1186 aaPredicted RBP23.62■■□□□ 1.37
IRF3-222ENST00000599144 CYP2E1P05181 493 aaPredicted RBP23.61■■□□□ 1.37
IRF3-222ENST00000599144 DYNLL1P63167 89 aaKnown RBP23.61■■□□□ 1.37
IRF3-222ENST00000599144 PABPC4Q13310 644 aaKnown RBP eCLIP23.61■■□□□ 1.376e-8■■■■□ 22.6
IRF3-222ENST00000599144 TNNI3KQ59H18 835 aa23.61■■□□□ 1.37
IRF3-222ENST00000599144 TRIB2Q92519 343 aa23.61■■□□□ 1.37
IRF3-222ENST00000599144 AS3MTQ9HBK9 375 aa23.61■■□□□ 1.37
IRF3-222ENST00000599144 PIH1D3Q9NQM4 214 aaKnown RBP23.61■■□□□ 1.37
IRF3-222ENST00000599144 PI4KBQ9UBF8 816 aa23.61■■□□□ 1.37
IRF3-222ENST00000599144 HERC5Q9UII4 1024 aaKnown RBP23.61■■□□□ 1.37
IRF3-222ENST00000599144 FPGT-TNNI3KV9GXZ4 949 aa23.61■■□□□ 1.37
IRF3-222ENST00000599144 SZT2Q5T011 3432 aa23.61■■□□□ 1.37
IRF3-222ENST00000599144 FLT1P17948 1338 aa23.6■■□□□ 1.37
IRF3-222ENST00000599144 MAP4K4O95819 1239 aaPredicted RBP23.6■■□□□ 1.37
IRF3-222ENST00000599144 ZAP70P43403 619 aa23.6■■□□□ 1.37
IRF3-222ENST00000599144 IRX3P78415 501 aaPredicted RBP23.6■■□□□ 1.37
IRF3-222ENST00000599144 NECAB2Q7Z6G3 386 aa23.6■■□□□ 1.37
IRF3-222ENST00000599144 TLR7Q9NYK1 1049 aaKnown RBP23.6■■□□□ 1.37
IRF3-222ENST00000599144 IPO8O15397 1037 aaKnown RBP23.59■■□□□ 1.37
IRF3-222ENST00000599144 MNX1P50219 401 aaPredicted RBP23.59■■□□□ 1.37
IRF3-222ENST00000599144 BACE1P56817 501 aa23.59■■□□□ 1.37
IRF3-222ENST00000599144 OS9Q13438 667 aaPredicted RBP23.59■■□□□ 1.37
IRF3-222ENST00000599144 WDR18Q9BV38 432 aa23.59■■□□□ 1.37
IRF3-222ENST00000599144 TMOD4Q9NZQ9 345 aa23.59■■□□□ 1.37
IRF3-222ENST00000599144 MORF4L1Q9UBU8 362 aa23.59■■□□□ 1.37
IRF3-222ENST00000599144 LOC285556D6RIA3 1793 aa23.59■■□□□ 1.37
IRF3-222ENST00000599144 BAG3O95817 575 aa23.58■■□□□ 1.37
IRF3-222ENST00000599144 SYN1P17600 705 aa23.58■■□□□ 1.37
IRF3-222ENST00000599144 CRACR2BQ8N4Y2 399 aaPredicted RBP23.58■■□□□ 1.37
IRF3-222ENST00000599144 TBC1D2Q9BYX2 928 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms