RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 ANGEL1Q9UNK9 670 aaKnown RBP27.49■■□□□ 1.99
SYMPK-212ENST00000598896 SBF1O95248 1867 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 DTNBO60941 627 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 OGFOD1Q8N543 542 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 OSBPL5Q9H0X9 879 aaPredicted RBP27.49■■□□□ 1.99
SYMPK-212ENST00000598896 TDRD3Q9H7E2 651 aaKnown RBP27.49■■□□□ 1.99
SYMPK-212ENST00000598896 HDAC9Q9UKV0 1011 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 BRPF3Q9ULD4 1205 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 DICER1Q9UPY3 1922 aaKnown RBP27.48■■□□□ 1.99
SYMPK-212ENST00000598896 PDE4BQ07343 736 aa27.48■■□□□ 1.99
SYMPK-212ENST00000598896 TNIP1Q15025 636 aa27.48■■□□□ 1.99
SYMPK-212ENST00000598896 SLC44A5Q8NCS7 719 aa27.48■■□□□ 1.99
SYMPK-212ENST00000598896 SPDYE2BA6NHP3 402 aa27.47■■□□□ 1.99
SYMPK-212ENST00000598896 RANBP6O60518 1105 aaKnown RBP27.47■■□□□ 1.99
SYMPK-212ENST00000598896 SPDYE6P0CI01 402 aa27.47■■□□□ 1.99
SYMPK-212ENST00000598896 GTF3C6Q969F1 213 aa27.47■■□□□ 1.99
SYMPK-212ENST00000598896 LY9Q9HBG7 655 aa27.47■■□□□ 1.99
SYMPK-212ENST00000598896 SHTN1A0MZ66 631 aa27.47■■□□□ 1.99
SYMPK-212ENST00000598896 PDIA3P30101 505 aaKnown RBP27.47■■□□□ 1.99
SYMPK-212ENST00000598896 IDI2Q9BXS1 227 aa27.47■■□□□ 1.99
SYMPK-212ENST00000598896 CWC22Q9HCG8 908 aaKnown RBP27.47■■□□□ 1.99
SYMPK-212ENST00000598896 CHMP5Q9NZZ3 219 aa27.47■■□□□ 1.99
SYMPK-212ENST00000598896 FAM198AQ9UFP1 575 aa27.47■■□□□ 1.99
SYMPK-212ENST00000598896 ZNF541Q9H0D2 1346 aa27.46■■□□□ 1.99
SYMPK-212ENST00000598896 SCRN1Q12765 414 aa27.46■■□□□ 1.99
SYMPK-212ENST00000598896 TMEM67Q5HYA8 995 aa27.46■■□□□ 1.99
SYMPK-212ENST00000598896 ZFPM1Q8IX07 1006 aa27.46■■□□□ 1.99
SYMPK-212ENST00000598896 KLF18A0A0U1RQI7 1052 aa27.45■■□□□ 1.99
SYMPK-212ENST00000598896 IFIT3O14879 490 aaKnown RBP27.45■■□□□ 1.99
SYMPK-212ENST00000598896 LMNB1P20700 586 aa27.45■■□□□ 1.99
SYMPK-212ENST00000598896 ZNF274Q96GC6 653 aaPredicted RBP27.45■■□□□ 1.99
SYMPK-212ENST00000598896 PFKFB2O60825 505 aa27.44■■□□□ 1.98
SYMPK-212ENST00000598896 EIF6P56537 245 aaKnown RBP27.44■■□□□ 1.98
SYMPK-212ENST00000598896 FAM47AQ5JRC9 791 aa27.44■■□□□ 1.98
SYMPK-212ENST00000598896 CIZ1Q9ULV3 898 aaPredicted RBP27.44■■□□□ 1.98
SYMPK-212ENST00000598896 NAP1L2Q9ULW6 460 aaPredicted RBP27.44■■□□□ 1.98
SYMPK-212ENST00000598896 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.44■■□□□ 1.98
SYMPK-212ENST00000598896 TCP10Q12799 353 aa27.44■■□□□ 1.98
SYMPK-212ENST00000598896 DLGAP5Q15398 846 aa27.44■■□□□ 1.98
SYMPK-212ENST00000598896 C16orf86Q6ZW13 317 aa27.44■■□□□ 1.98
SYMPK-212ENST00000598896 LIFRP42702 1097 aa27.43■■□□□ 1.98
SYMPK-212ENST00000598896 SGMS1Q86VZ5 419 aa27.43■■□□□ 1.98
SYMPK-212ENST00000598896 UBAC1Q9BSL1 405 aa27.43■■□□□ 1.98
SYMPK-212ENST00000598896 MTA3Q9BTC8 594 aa27.43■■□□□ 1.98
SYMPK-212ENST00000598896 HPS5Q9UPZ3 1129 aa27.43■■□□□ 1.98
SYMPK-212ENST00000598896 TNKSO95271 1327 aa27.43■■□□□ 1.98
SYMPK-212ENST00000598896 SIPA1L1O43166 1804 aa27.43■■□□□ 1.98
SYMPK-212ENST00000598896 PKP1Q13835 747 aa27.42■■□□□ 1.98
SYMPK-212ENST00000598896 SEC23AQ15436 765 aa27.42■■□□□ 1.98
SYMPK-212ENST00000598896 RPS12P25398 132 aaKnown RBP27.42■■□□□ 1.98
SYMPK-212ENST00000598896 CCT2P78371 535 aaKnown RBP27.42■■□□□ 1.98
SYMPK-212ENST00000598896 SART3Q15020 963 aaKnown RBP27.42■■□□□ 1.98
SYMPK-212ENST00000598896 TTC6Q86TZ1 520 aa27.42■■□□□ 1.98
SYMPK-212ENST00000598896 RAB11FIP4Q86YS3 637 aa27.42■■□□□ 1.98
SYMPK-212ENST00000598896 MTMR14Q8NCE2 650 aa27.42■■□□□ 1.98
SYMPK-212ENST00000598896 MKNK2Q9HBH9 465 aa27.42■■□□□ 1.98
SYMPK-212ENST00000598896 NCOA5Q9HCD5 579 aaKnown RBP27.42■■□□□ 1.98
SYMPK-212ENST00000598896 GJA3Q9Y6H8 435 aa27.42■■□□□ 1.98
SYMPK-212ENST00000598896 GOLGA8BA8MQT2 603 aa27.41■■□□□ 1.98
SYMPK-212ENST00000598896 NPM3O75607 178 aaKnown RBP27.41■■□□□ 1.98
SYMPK-212ENST00000598896 CDK8P49336 464 aa27.41■■□□□ 1.98
SYMPK-212ENST00000598896 GMPSP49915 693 aaPredicted RBP27.41■■□□□ 1.98
SYMPK-212ENST00000598896 GABPAQ06546 454 aa27.41■■□□□ 1.98
SYMPK-212ENST00000598896 APOA5Q6Q788 366 aa27.41■■□□□ 1.98
SYMPK-212ENST00000598896 ZSCAN10Q96SZ4 725 aaPredicted RBP27.41■■□□□ 1.98
SYMPK-212ENST00000598896 CLRN2A0PK11 232 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 NMT2O60551 498 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 RASA1P20936 1047 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 WTAPQ15007 396 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 SH3BP5LQ7L8J4 393 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 ENAHQ8N8S7 591 aaPredicted RBP27.4■■□□□ 1.98
SYMPK-212ENST00000598896 ZBED3Q96IU2 234 aaPredicted RBP27.4■■□□□ 1.98
SYMPK-212ENST00000598896 MYOZ2Q9NPC6 264 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 SMC3Q9UQE7 1217 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 DDTLA6NHG4 134 aaPredicted RBP27.4■■□□□ 1.98
SYMPK-212ENST00000598896 TSPY2A6NKD2 308 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 ZNF280AP59817 542 aaPredicted RBP27.4■■□□□ 1.98
SYMPK-212ENST00000598896 IQCA1Q86XH1 822 aa27.4■■□□□ 1.98
SYMPK-212ENST00000598896 ERICH2A1L162 156 aa27.39■■□□□ 1.98
SYMPK-212ENST00000598896 EGFRP00533 1210 aa27.39■■□□□ 1.98
SYMPK-212ENST00000598896 NFXL1Q6ZNB6 911 aa27.39■■□□□ 1.98
SYMPK-212ENST00000598896 ZNF70Q9UC06 446 aaPredicted RBP27.39■■□□□ 1.98
SYMPK-212ENST00000598896 GJB2P29033 226 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 TFAP4Q01664 338 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 SPDYE2Q495Y8 402 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 MYL10Q9BUA6 226 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 SERPINB13Q9UIV8 391 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 WNT10BO00744 389 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 CTDNEP1O95476 244 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 SLURP2P0DP57 97 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 RXRAP19793 462 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 MICALL2Q8IY33 904 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 DPF2Q92785 391 aa27.38■■□□□ 1.97
SYMPK-212ENST00000598896 MYH8P13535 1937 aa27.37■■□□□ 1.97
SYMPK-212ENST00000598896 JAK2O60674 1132 aa27.37■■□□□ 1.97
SYMPK-212ENST00000598896 ENTPD3O75355 529 aa27.37■■□□□ 1.97
SYMPK-212ENST00000598896 NBPF9Q3BBW0 867 aa27.37■■□□□ 1.97
SYMPK-212ENST00000598896 ZNF287Q9HBT7 754 aa27.37■■□□□ 1.97
SYMPK-212ENST00000598896 CCDC69A6NI79 296 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 NT5C2P49902 561 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms