RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 METTL16Q86W50 562 aaKnown RBP22.62■■□□□ 1.21
GRAMD1A-207ENST00000598118 DIS3L2Q8IYB7 885 aaKnown RBP22.62■■□□□ 1.21
GRAMD1A-207ENST00000598118 CRACR2BQ8N4Y2 399 aaPredicted RBP22.62■■□□□ 1.21
GRAMD1A-207ENST00000598118 OSBPL5Q9H0X9 879 aaPredicted RBP22.62■■□□□ 1.21
GRAMD1A-207ENST00000598118 MINDY4BA8MYZ0 360 aa22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 FOXP4Q8IVH2 680 aaPredicted RBP22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 COL5A3P25940 1745 aaPredicted RBP22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 LMOD1P29536 600 aaPredicted RBP22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 GRIN1Q05586 938 aa22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 GLIPR1L2Q4G1C9 344 aa22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 ZNF654Q8IZM8 581 aa22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 NUP133Q8WUM0 1156 aa22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 WASF1Q92558 559 aa22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 CDC5LQ99459 802 aaKnown RBP22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 RAI14Q9P0K7 980 aa22.61■■□□□ 1.21
GRAMD1A-207ENST00000598118 ERICH2A1L162 156 aa22.6■■□□□ 1.21
GRAMD1A-207ENST00000598118 FANCBQ8NB91 859 aa22.6■■□□□ 1.21
GRAMD1A-207ENST00000598118 KCNH3Q9ULD8 1083 aa22.6■■□□□ 1.21
GRAMD1A-207ENST00000598118 ATP1A3P13637 1013 aa22.6■■□□□ 1.21
GRAMD1A-207ENST00000598118 NR5A1Q13285 461 aa22.6■■□□□ 1.21
GRAMD1A-207ENST00000598118 TRIM22Q8IYM9 498 aa22.6■■□□□ 1.21
GRAMD1A-207ENST00000598118 RNF41Q9H4P4 317 aaPredicted RBP22.6■■□□□ 1.21
GRAMD1A-207ENST00000598118 MAGEB6P1A0A0J9YX57 407 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 SMTNL1A8MU46 457 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 FOXN1O15353 648 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 KCNQ4P56696 695 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 SEC23AQ15436 765 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 KRBA2Q6ZNG9 492 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 TMC6Q7Z403 805 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 RIOK1Q9BRS2 568 aaKnown RBP22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 IMPACTQ9P2X3 320 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 SPATA31A5Q5VU36 1347 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 SPATA31A7Q8IWB4 1347 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 IKBKBO14920 756 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 GSDMDP57764 484 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 ARMCX5Q6P1M9 558 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 SMIM5Q71RC9 77 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 ANKRD18AQ8IVF6 992 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 KRI1Q8N9T8 703 aaKnown RBP22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 OXER1Q8TDS5 423 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 ZNF384Q8TF68 577 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 SHISA4Q96DD7 197 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 MTA3Q9BTC8 594 aa22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 TRMT1Q9NXH9 659 aaKnown RBP22.59■■□□□ 1.21
GRAMD1A-207ENST00000598118 CYP2D7A0A087X1C5 515 aa22.58■■□□□ 1.21
GRAMD1A-207ENST00000598118 DEXIO95424 95 aa22.58■■□□□ 1.21
GRAMD1A-207ENST00000598118 DYNLL1P63167 89 aaKnown RBP22.58■■□□□ 1.21
GRAMD1A-207ENST00000598118 NYAP1Q6ZVC0 841 aa22.58■■□□□ 1.21
GRAMD1A-207ENST00000598118 TMTC2Q8N394 836 aa22.58■■□□□ 1.21
GRAMD1A-207ENST00000598118 ZNF652Q9Y2D9 606 aa22.58■■□□□ 1.21
GRAMD1A-207ENST00000598118 TNKSO95271 1327 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 SAFBQ15424 915 aaKnown RBP eCLIP22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 LINC00116Q8NCU8 138 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 UBAC1Q9BSL1 405 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 FOXP1Q9H334 677 aaPredicted RBP22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 ANAPC4Q9UJX5 808 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 PCDHB6Q9Y5E3 794 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 FANCCQ00597 558 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 CEP135Q66GS9 1140 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 CCAR2Q8N163 923 aaKnown RBP22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 CNNM3Q8NE01 707 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 FBXO2Q9UK22 296 aaPredicted RBP22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 MINPP1Q9UNW1 487 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 PCDHA5Q9Y5H7 936 aa22.57■■□□□ 1.2
GRAMD1A-207ENST00000598118 BMP6P22004 513 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 MDM2Q00987 491 aaPredicted RBP22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 SF3B3Q15393 1217 aaKnown RBP22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 CLEC4GQ6UXB4 293 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 ZNF592Q92610 1267 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 BSDC1Q9NW68 430 aaPredicted RBP22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 TPM4P67936 248 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 UBE4AQ14139 1066 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 ANKRD7Q92527 254 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 DPF2Q92785 391 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 CELF1Q92879 486 aaKnown RBP22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 FAM84BQ96KN1 310 aaPredicted RBP22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 PAXBP1Q9Y5B6 917 aa22.56■■□□□ 1.2
GRAMD1A-207ENST00000598118 NUTM2BA6NNL0 878 aaPredicted RBP22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 NUTM2EB1AL46 878 aaPredicted RBP22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 PTPREP23469 700 aa22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 RCAN1P53805 252 aa22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 BICDL1Q6ZP65 573 aa22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 NUTM2AQ8IVF1 878 aaPredicted RBP22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 ESR2Q92731 530 aa22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 GNL3LQ9NVN8 582 aaKnown RBP22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 PTPN14Q15678 1187 aa22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 RILPL1Q5EBL4 403 aa22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 ENAHQ8N8S7 591 aaPredicted RBP22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 SCN7AQ01118 1682 aa22.55■■□□□ 1.2
GRAMD1A-207ENST00000598118 MYH13Q9UKX3 1938 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 KLRK1P26718 216 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 PDE4BQ07343 736 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 KCND1Q9NSA2 647 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 DUOX1Q9NRD9 1551 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 PRDM1O75626 825 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 ATP2B1P20020 1258 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 MYL5Q02045 173 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 EVX2Q03828 476 aa22.54■■□□□ 1.2
GRAMD1A-207ENST00000598118 SMARCC1Q92922 1105 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms