RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 SCYL3Q8IZE3 742 aa27.58■■■□□ 2.01
IRF3-220ENST00000598108 LCORLQ8N3X6 602 aa27.58■■■□□ 2.01
IRF3-220ENST00000598108 AK9Q5TCS8 1911 aa27.57■■■□□ 2
IRF3-220ENST00000598108 CTNND1O60716 968 aaKnown RBP27.57■■■□□ 2
IRF3-220ENST00000598108 METTL16Q86W50 562 aaKnown RBP27.57■■■□□ 2
IRF3-220ENST00000598108 KBTBD3Q8NAB2 608 aa27.57■■■□□ 2
IRF3-220ENST00000598108 LNPKQ9C0E8 428 aa27.57■■■□□ 2
IRF3-220ENST00000598108 ARMT1Q9H993 441 aa27.57■■■□□ 2
IRF3-220ENST00000598108 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.57■■■□□ 2
IRF3-220ENST00000598108 CCL15-CCL14A0A0B4J2E2 113 aa27.56■■■□□ 2
IRF3-220ENST00000598108 ERC2O15083 957 aa27.56■■■□□ 2
IRF3-220ENST00000598108 GLRX3O76003 335 aaKnown RBP27.56■■■□□ 2
IRF3-220ENST00000598108 PTPRAP18433 802 aa27.56■■■□□ 2
IRF3-220ENST00000598108 CCL15Q16663 113 aa27.56■■■□□ 2
IRF3-220ENST00000598108 DNAJC18Q9H819 358 aa27.56■■■□□ 2
IRF3-220ENST00000598108 MBD4O95243 580 aa27.55■■■□□ 2
IRF3-220ENST00000598108 FOXP4Q8IVH2 680 aaPredicted RBP27.55■■■□□ 2
IRF3-220ENST00000598108 CRNKL1Q9BZJ0 848 aaKnown RBP27.55■■■□□ 2
IRF3-220ENST00000598108 PICK1Q9NRD5 415 aa27.55■■■□□ 2
IRF3-220ENST00000598108 STAP2Q9UGK3 403 aa27.55■■■□□ 2
IRF3-220ENST00000598108 HERC5Q9UII4 1024 aaKnown RBP27.55■■■□□ 2
IRF3-220ENST00000598108 PRKAB2O43741 272 aa27.54■■■□□ 2
IRF3-220ENST00000598108 SNAPC2Q13487 334 aa27.54■■■□□ 2
IRF3-220ENST00000598108 ZSCAN25Q6NSZ9 544 aa27.54■■■□□ 2
IRF3-220ENST00000598108 SDR42E1Q8WUS8 393 aa27.54■■■□□ 2
IRF3-220ENST00000598108 PUS7LQ9H0K6 701 aaKnown RBP27.54■■■□□ 2
IRF3-220ENST00000598108 KCNH4Q9UQ05 1017 aa27.54■■■□□ 2
IRF3-220ENST00000598108 ZHX2Q9Y6X8 837 aa27.54■■■□□ 2
IRF3-220ENST00000598108 ALDH1A1P00352 501 aa27.53■■■□□ 2
IRF3-220ENST00000598108 PDE1AP54750 535 aa27.53■■■□□ 2
IRF3-220ENST00000598108 CCDC84Q86UT8 332 aaPredicted RBP27.53■■■□□ 2
IRF3-220ENST00000598108 TNS4Q8IZW8 715 aa27.53■■■□□ 2
IRF3-220ENST00000598108 CFHR5Q9BXR6 569 aa27.53■■■□□ 2
IRF3-220ENST00000598108 CETPP11597 493 aa27.52■■■□□ 2
IRF3-220ENST00000598108 CAP2P40123 477 aa27.52■■■□□ 2
IRF3-220ENST00000598108 JAG1P78504 1218 aa27.52■■■□□ 2
IRF3-220ENST00000598108 NUCB1Q02818 461 aa27.52■■■□□ 2
IRF3-220ENST00000598108 FAM43AQ8N2R8 423 aa27.52■■■□□ 2
IRF3-220ENST00000598108 RNF113AO15541 343 aaKnown RBP27.51■■□□□ 1.99
IRF3-220ENST00000598108 HLA-DOAP06340 250 aa27.51■■□□□ 1.99
IRF3-220ENST00000598108 PLCD1P51178 756 aa27.51■■□□□ 1.99
IRF3-220ENST00000598108 EVX2Q03828 476 aa27.51■■□□□ 1.99
IRF3-220ENST00000598108 OTUD7BQ6GQQ9 843 aa27.51■■□□□ 1.99
IRF3-220ENST00000598108 CHD1LQ86WJ1 897 aa27.51■■□□□ 1.99
IRF3-220ENST00000598108 CRACR2BQ8N4Y2 399 aaPredicted RBP27.51■■□□□ 1.99
IRF3-220ENST00000598108 OSBP2Q969R2 916 aa27.51■■□□□ 1.99
IRF3-220ENST00000598108 DCP1AQ9NPI6 582 aaPredicted RBP27.51■■□□□ 1.99
IRF3-220ENST00000598108 AFG3L2Q9Y4W6 797 aa27.51■■□□□ 1.99
IRF3-220ENST00000598108 BTBD19C9JJ37 291 aa27.5■■□□□ 1.99
IRF3-220ENST00000598108 GPR25O00155 361 aa27.5■■□□□ 1.99
IRF3-220ENST00000598108 MOGSQ13724 837 aa27.5■■□□□ 1.99
IRF3-220ENST00000598108 SHROOM1Q2M3G4 852 aaPredicted RBP27.5■■□□□ 1.99
IRF3-220ENST00000598108 CXCL11O14625 94 aa27.49■■□□□ 1.99
IRF3-220ENST00000598108 CRHR2Q13324 411 aa27.49■■□□□ 1.99
IRF3-220ENST00000598108 MCM9Q9NXL9 1143 aa27.49■■□□□ 1.99
IRF3-220ENST00000598108 POLR3DP05423 398 aaPredicted RBP27.48■■□□□ 1.99
IRF3-220ENST00000598108 TTC6Q86TZ1 520 aa27.48■■□□□ 1.99
IRF3-220ENST00000598108 ZNF296Q8WUU4 475 aaPredicted RBP27.48■■□□□ 1.99
IRF3-220ENST00000598108 STRBPQ96SI9 672 aaKnown RBP27.48■■□□□ 1.99
IRF3-220ENST00000598108 TRIM34Q9BYJ4 488 aa27.48■■□□□ 1.99
IRF3-220ENST00000598108 ZFYP08048 801 aaPredicted RBP27.47■■□□□ 1.99
IRF3-220ENST00000598108 CYP2D6P10635 497 aa27.47■■□□□ 1.99
IRF3-220ENST00000598108 APPBP2Q92624 585 aa27.47■■□□□ 1.99
IRF3-220ENST00000598108 EHD4Q9H223 541 aa27.47■■□□□ 1.99
IRF3-220ENST00000598108 SERPINB13Q9UIV8 391 aa27.47■■□□□ 1.99
IRF3-220ENST00000598108 CDK5RAP2Q96SN8 1893 aa27.47■■□□□ 1.99
IRF3-220ENST00000598108 NOM1Q5C9Z4 860 aaKnown RBP27.46■■□□□ 1.99
IRF3-220ENST00000598108 FSD1Q9BTV5 496 aa27.46■■□□□ 1.99
IRF3-220ENST00000598108 ATP8A2Q9NTI2 1148 aa27.46■■□□□ 1.99
IRF3-220ENST00000598108 SLC4A4Q9Y6R1 1079 aa27.46■■□□□ 1.99
IRF3-220ENST00000598108 SIPA1L1O43166 1804 aa27.46■■□□□ 1.99
IRF3-220ENST00000598108 TRIM75PA6NK02 468 aa27.45■■□□□ 1.98
IRF3-220ENST00000598108 GDF11O95390 407 aa27.45■■□□□ 1.98
IRF3-220ENST00000598108 TATDN1Q6P1N9 297 aa27.45■■□□□ 1.98
IRF3-220ENST00000598108 PLEKHM2Q8IWE5 1019 aa27.45■■□□□ 1.98
IRF3-220ENST00000598108 CASP8AP2Q9UKL3 1982 aa27.44■■□□□ 1.98
IRF3-220ENST00000598108 FOCADQ5VW36 1801 aa27.44■■□□□ 1.98
IRF3-220ENST00000598108 A0A0G2JLL6 359 aaPredicted RBP27.44■■□□□ 1.98
IRF3-220ENST00000598108 SMIM22K7EJ46 135 aa27.44■■□□□ 1.98
IRF3-220ENST00000598108 GABPAQ06546 454 aa27.44■■□□□ 1.98
IRF3-220ENST00000598108 GPAT2Q6NUI2 795 aa27.44■■□□□ 1.98
IRF3-220ENST00000598108 PRRT2Q7Z6L0 340 aaPredicted RBP27.44■■□□□ 1.98
IRF3-220ENST00000598108 USP17L5A8MUK1 530 aa27.43■■□□□ 1.98
IRF3-220ENST00000598108 M0R2C6 588 aa27.43■■□□□ 1.98
IRF3-220ENST00000598108 SHMT1P34896 483 aa27.43■■□□□ 1.98
IRF3-220ENST00000598108 SPP2Q13103 211 aa27.43■■□□□ 1.98
IRF3-220ENST00000598108 TAF1CQ15572 869 aaPredicted RBP27.43■■□□□ 1.98
IRF3-220ENST00000598108 SEC62Q99442 399 aaKnown RBP27.43■■□□□ 1.98
IRF3-220ENST00000598108 LAMB1P07942 1786 aa27.43■■□□□ 1.98
IRF3-220ENST00000598108 CYP2D7A0A087X1C5 515 aa27.42■■□□□ 1.98
IRF3-220ENST00000598108 FKTNO75072 461 aa27.42■■□□□ 1.98
IRF3-220ENST00000598108 ANKRD23Q86SG2 305 aa27.42■■□□□ 1.98
IRF3-220ENST00000598108 ZNF280CQ8ND82 737 aa27.42■■□□□ 1.98
IRF3-220ENST00000598108 EVI5LQ96CN4 794 aa27.42■■□□□ 1.98
IRF3-220ENST00000598108 ZCCHC17Q9NP64 241 aaKnown RBP27.42■■□□□ 1.98
IRF3-220ENST00000598108 GSG1L2A8MUP6 293 aa27.41■■□□□ 1.98
IRF3-220ENST00000598108 USP17L12C9JPN9 530 aa27.41■■□□□ 1.98
IRF3-220ENST00000598108 USP17L21D6R901 530 aa27.41■■□□□ 1.98
IRF3-220ENST00000598108 PDHXO00330 501 aa27.41■■□□□ 1.98
IRF3-220ENST00000598108 GPAA1O43292 621 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms