RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 CASP7P55210 303 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 FBXO38Q6PIJ6 1188 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 HEATR3Q7Z4Q2 680 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.16□□□□□ -0.14
USHBP1-207ENST00000597928 CTNND2Q9UQB3 1225 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
USHBP1-207ENST00000597928 SH2B2O14492 632 aaPredicted RBP14.16□□□□□ -0.14
USHBP1-207ENST00000597928 EVCP57679 992 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 ANKRD20A12PQ8NF67 263 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 CAGE1Q8TC20 777 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 STRBPQ96SI9 672 aaKnown RBP14.16□□□□□ -0.14
USHBP1-207ENST00000597928 TEX13AQ9BXU3 409 aaPredicted RBP14.16□□□□□ -0.14
USHBP1-207ENST00000597928 KRT23Q9C075 422 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 SPATA31A3Q5VYP0 1347 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 PLEKHA8P1O95397 391 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 GYS2P54840 703 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 CHRNDQ07001 517 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 MTF1Q14872 753 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 TSGA10IPQ3SY00 556 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 CAPZA3Q96KX2 299 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.16□□□□□ -0.14
USHBP1-207ENST00000597928 TAB2Q9NYJ8 693 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 ZMYM6O95789 1325 aa14.15□□□□□ -0.14
USHBP1-207ENST00000597928 PDE4BQ07343 736 aa14.15□□□□□ -0.14
USHBP1-207ENST00000597928 ZNF569Q5MCW4 686 aa14.15□□□□□ -0.14
USHBP1-207ENST00000597928 NOL10Q9BSC4 688 aaKnown RBP14.15□□□□□ -0.14
USHBP1-207ENST00000597928 CYP2D6P10635 497 aa14.15□□□□□ -0.14
USHBP1-207ENST00000597928 EIF5P55010 431 aaKnown RBP14.15□□□□□ -0.14
USHBP1-207ENST00000597928 NOM1Q5C9Z4 860 aaKnown RBP14.15□□□□□ -0.14
USHBP1-207ENST00000597928 KRBA2Q6ZNG9 492 aa14.15□□□□□ -0.14
USHBP1-207ENST00000597928 FANCBQ8NB91 859 aa14.15□□□□□ -0.14
USHBP1-207ENST00000597928 NOC3LQ8WTT2 800 aaKnown RBP14.15□□□□□ -0.14
USHBP1-207ENST00000597928 KCNQ2O43526 872 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 PPARAQ07869 468 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 CCDC102AQ96A19 550 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 PSMB7Q99436 277 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 IDEP14735 1019 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 EVX2Q03828 476 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 NBPF5PQ86XG9 351 aaPredicted RBP14.14□□□□□ -0.15
USHBP1-207ENST00000597928 KRT222Q8N1A0 295 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 ENGASEQ8NFI3 743 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 TANGO6Q9C0B7 1094 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 RABEP2Q9H5N1 569 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 PXDNLA1KZ92 1463 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 C1orf167Q5SNV9 1468 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 ZSCAN12O43309 604 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 POLR3EQ9NVU0 708 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 GUCA1BQ9UMX6 200 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 RIPOR2Q9Y4F9 1068 aa14.14□□□□□ -0.15
USHBP1-207ENST00000597928 CCZ1BP86790 482 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 CCZ1P86791 482 aaPredicted RBP14.13□□□□□ -0.15
USHBP1-207ENST00000597928 KMT5BQ4FZB7 885 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 ZNF397Q8NF99 534 aaPredicted RBP14.13□□□□□ -0.15
USHBP1-207ENST00000597928 ISCA1Q9BUE6 129 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 RNF41Q9H4P4 317 aaPredicted RBP14.13□□□□□ -0.15
USHBP1-207ENST00000597928 ZCCHC17Q9NP64 241 aaKnown RBP14.13□□□□□ -0.15
USHBP1-207ENST00000597928 PIK3C2AO00443 1686 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 REREQ9P2R6 1566 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 UBN2Q6ZU65 1347 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 MON2Q7Z3U7 1717 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 CLSTN1O94985 981 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 E4F1Q66K89 784 aaPredicted RBP14.13□□□□□ -0.15
USHBP1-207ENST00000597928 TMEM87BQ96K49 555 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 CCDC194A0A1B0GVG4 234 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 PICALMQ13492 652 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 PODXL2Q9NZ53 605 aa14.13□□□□□ -0.15
USHBP1-207ENST00000597928 SOS2Q07890 1332 aaPredicted RBP14.13□□□□□ -0.15
USHBP1-207ENST00000597928 CIAO1O76071 339 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 IPO7O95373 1038 aaKnown RBP14.12□□□□□ -0.15
USHBP1-207ENST00000597928 CRKLP46109 303 aaKnown RBP14.12□□□□□ -0.15
USHBP1-207ENST00000597928 FAM98CQ17RN3 349 aaKnown RBP14.12□□□□□ -0.15
USHBP1-207ENST00000597928 CCDC178Q5BJE1 867 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 EPB41L4AQ9HCS5 686 aaPredicted RBP14.12□□□□□ -0.15
USHBP1-207ENST00000597928 DACH1Q9UI36 760 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 SOWAHDA6NJG2 315 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 TEX33O43247 280 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 TXLNAP40222 546 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 MRPS25P82663 173 aaKnown RBP14.12□□□□□ -0.15
USHBP1-207ENST00000597928 CDC5LQ99459 802 aaKnown RBP14.12□□□□□ -0.15
USHBP1-207ENST00000597928 LY9Q9HBG7 655 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 CEP131Q9UPN4 1083 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 CUTAO60888 179 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 IKQ13123 557 aaPredicted RBP14.12□□□□□ -0.15
USHBP1-207ENST00000597928 METTL16Q86W50 562 aaKnown RBP14.12□□□□□ -0.15
USHBP1-207ENST00000597928 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 MAN1B1Q9UKM7 699 aa14.12□□□□□ -0.15
USHBP1-207ENST00000597928 TFRCP02786 760 aaKnown RBP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 KRT2P35908 639 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 UBA7P41226 1012 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 FMR1Q06787 632 aaKnown RBP eCLIP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 TOGARAM2Q6ZUX3 1019 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 AMOTL1Q8IY63 956 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 SYMPKQ92797 1274 aaKnown RBP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 DYNLL2Q96FJ2 89 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 ERO1AQ96HE7 468 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 SLF1Q9BQI6 1058 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 CARD10Q9BWT7 1032 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 KAT14Q9H8E8 782 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms