RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 LRRFIP1Q32MZ4 808 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 C17orf99Q6UX52 265 aa14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 TDRD7Q8NHU6 1098 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 UNC93B1Q9H1C4 597 aa14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 ZCCHC17Q9NP64 241 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 RFX7Q2KHR2 1363 aa14.54□□□□□ -0.08
SHKBP1-213ENST00000597325 COL2A1P02458 1487 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 MAGEA10P43363 369 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 PSMC4P43686 418 aa14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 ZGPATQ8N5A5 531 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 WDR66Q8TBY9 1149 aa14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 RAET1EQ8TD07 263 aa14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 FBXW7Q969H0 707 aa14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 EDC3Q96F86 508 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 PCDHAC2Q9Y5I4 1007 aa14.53□□□□□ -0.08
SHKBP1-213ENST00000597325 MAST2Q6P0Q8 1798 aa14.52□□□□□ -0.08
SHKBP1-213ENST00000597325 HIP1O00291 1037 aa14.52□□□□□ -0.09
SHKBP1-213ENST00000597325 CAPN2P17655 700 aa14.52□□□□□ -0.09
SHKBP1-213ENST00000597325 UBXN2AP68543 259 aa14.52□□□□□ -0.09
SHKBP1-213ENST00000597325 TTLL5Q6EMB2 1281 aa14.52□□□□□ -0.09
SHKBP1-213ENST00000597325 KBTBD3Q8NAB2 608 aa14.52□□□□□ -0.09
SHKBP1-213ENST00000597325 DIAPH3Q9NSV4 1193 aa14.52□□□□□ -0.09
SHKBP1-213ENST00000597325 ZMYND8Q9ULU4 1186 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-213ENST00000597325 DOCK2Q92608 1830 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 BTBD19C9JJ37 291 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 IDH1O75874 414 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 CYP2E1P05181 493 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 MAP3K12Q12852 859 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 DLGAP5Q15398 846 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 SPTY2D1Q68D10 685 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 ZSCAN25Q6NSZ9 544 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 TBC1D22AQ8WUA7 517 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 FAM122AQ96E09 287 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 PAWRQ96IZ0 340 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 ANTXR1Q9H6X2 564 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 LRP2BPQ9P2M1 347 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 ABCF2Q9UG63 623 aa14.51□□□□□ -0.09
SHKBP1-213ENST00000597325 MYPNQ86TC9 1320 aa14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 SALL1Q9NSC2 1324 aa14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 ECM2O94769 699 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 HOXD10P28358 340 aa14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 VGLL4Q14135 290 aa14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 TICAM2Q86XR7 235 aa14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 C7orf61Q8IZ16 206 aa14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 SYMPKQ92797 1274 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 CRISPLD2Q9H0B8 497 aa14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 PIH1D3Q9NQM4 214 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 BIN2Q9UBW5 565 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 JAG2Q9Y219 1238 aa14.5□□□□□ -0.09
SHKBP1-213ENST00000597325 MYH7P12883 1935 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 FAM205AQ6ZU69 1335 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 ADGRA2Q96PE1 1338 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 CLRN2A0PK11 232 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 EIF5BO60841 1220 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 WDHD1O75717 1129 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 ZFYP08048 801 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 GTF2IP78347 998 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 RASA3Q14644 834 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 MFSD14BQ5SR56 506 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 TBC1D9Q6ZT07 1266 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 ERICH6Q7L0X2 663 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 SLAIN1Q8ND83 568 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 DIS3LQ8TF46 1054 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 RUFY2Q8WXA3 655 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 PAK6Q9NQU5 681 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 RAI14Q9P0K7 980 aa14.49□□□□□ -0.09
SHKBP1-213ENST00000597325 XIRP2A4UGR9 3374 aa14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 IGSF3O75054 1194 aa14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 TFRCP02786 760 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 LDHBP07195 334 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 SYN1P17600 705 aa14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 PRKCZQ05513 592 aa14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 NECAB2Q7Z6G3 386 aa14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 DZIP1Q86YF9 867 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 PRMT6Q96LA8 375 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 UBE2OQ9C0C9 1292 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-213ENST00000597325 RNF113AO15541 343 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 FMNL1O95466 1100 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 CETPP11597 493 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 PDE6AP16499 860 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 CHMLP26374 656 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 C8orf34Q49A92 452 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 SLC9C2Q5TAH2 1124 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 CDAN1Q8IWY9 1227 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 CERS5Q8N5B7 392 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 FAM161BQ96MY7 647 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 TEPSINQ96N21 525 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 DEFB118Q96PH6 123 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 CPA4Q9UI42 421 aa14.47□□□□□ -0.09
SHKBP1-213ENST00000597325 MGAMO43451 1857 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 MAST3O60307 1309 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 RAD50Q92878 1312 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 SPDYE5A6NIY4 337 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 TNFRSF10AO00220 468 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms