RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 PKN2Q16513 984 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 GPAT2Q6NUI2 795 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 CRACR2BQ8N4Y2 399 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 SH3TC2Q8TF17 1288 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 TRIM34Q9BYJ4 488 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 KCNH4Q9UQ05 1017 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 PHIPQ8WWQ0 1821 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 FLT1P17948 1338 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 TLR2O60603 784 aa12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 PEX10O60683 326 aa12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 EVX2Q03828 476 aa12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 TREML2Q5T2D2 321 aa12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 ANKRD23Q86SG2 305 aa12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 CLASRPQ8N2M8 674 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 AFG3L2Q9Y4W6 797 aa12.56□□□□□ -0.4
SHKBP1-210ENST00000595874 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 HMMRO75330 724 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 PSMC4P43686 418 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 RGS19P49795 217 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 SPP2Q13103 211 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 KIF22Q14807 665 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 ZYXQ15942 572 aaKnown RBP12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 RPAP2Q8IXW5 612 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 KIF1BPQ96EK5 621 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
SHKBP1-210ENST00000595874 MYH1P12882 1939 aa12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 FOCADQ5VW36 1801 aa12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 A0A0G2JLL6 359 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 HMGCS2P54868 508 aa12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 HSP90AB4PQ58FF6 505 aa12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 PRRT2Q7Z6L0 340 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 PTPRFP10586 1907 aa12.54□□□□□ -0.4
SHKBP1-210ENST00000595874 CXCL11O14625 94 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 ZBTB22O15209 634 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 CYP2D6P10635 497 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 EN2P19622 333 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 OSBPP22059 807 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 CAP2P40123 477 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 MAP3K12Q12852 859 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 SLC9C1Q4G0N8 1177 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 ZNF512BQ96KM6 892 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 TRIM47Q96LD4 638 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 PARK7Q99497 189 aaKnown RBP12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 GABRQQ9UN88 632 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 ZNF532Q9HCE3 1301 aa12.53□□□□□ -0.4
SHKBP1-210ENST00000595874 MAGEB6P1A0A0J9YX57 407 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 MAP4K4O95819 1239 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 HLA-DOAP06340 250 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 PDE6AP16499 860 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 PLCG2P16885 1265 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 PPP4CP60510 307 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 MAP3K10Q02779 954 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 MTMR2Q13614 643 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 ANKRD13CQ8N6S4 541 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 SMCR8Q8TEV9 937 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 SDR42E1Q8WUS8 393 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 ARMT1Q9H993 441 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 PI4KBQ9UBF8 816 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 NAV1Q8NEY1 1877 aa12.52□□□□□ -0.41
SHKBP1-210ENST00000595874 USP17L5A8MUK1 530 aa12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 SMIM22K7EJ46 135 aa12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 PRKAB2O43741 272 aa12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 TBC1D12O60347 775 aa12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 FASTKD5Q7L8L6 764 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 ZNF280CQ8ND82 737 aa12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 BIN2Q9UBW5 565 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
SHKBP1-210ENST00000595874 CYP2D7A0A087X1C5 515 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 GH2P01242 217 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 POLR3DP05423 398 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 PLCD1P51178 756 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 PRKCZQ05513 592 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 PDE3AQ14432 1141 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 RAB3GAP1Q15042 981 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 MTFR1Q15390 333 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 CRBNQ96SW2 442 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 PAG1Q9NWQ8 432 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 MGAMO43451 1857 aa12.5□□□□□ -0.41
SHKBP1-210ENST00000595874 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-210ENST00000595874 MPHOSPH10O00566 681 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-210ENST00000595874 NPM3O75607 178 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-210ENST00000595874 MBD4O95243 580 aa12.49□□□□□ -0.41
SHKBP1-210ENST00000595874 BCRP11274 1271 aa12.49□□□□□ -0.41
SHKBP1-210ENST00000595874 ELNP15502 786 aa12.49□□□□□ -0.41
SHKBP1-210ENST00000595874 ARHGEF6Q15052 776 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms