RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CDC37L1Q7L3B6 337 aa15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 AMOTL1Q8IY63 956 aa15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 GMLQ99445 158 aa15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 UPF3BQ9BZI7 483 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 DCP1AQ9NPI6 582 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 PDRG1Q9NUG6 133 aa15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 USP17L12C9JPN9 530 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 USP17L21D6R901 530 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 SLC3A2P08195 630 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 MCM2P49736 904 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 MMP14P50281 582 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 RHBDL3P58872 404 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 PPARAQ07869 468 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 PKN2Q16513 984 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 SBK1Q52WX2 424 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 APOBEC3HQ6NTF7 200 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 CDC42EP5Q6NZY7 148 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 CTR9Q6PD62 1173 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 MAPKAPK5Q8IW41 473 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 NCOA7Q8NI08 942 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 MCM9Q9NXL9 1143 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 TAF6LQ9Y6J9 622 aa15.46■□□□□ 0.07
SHKBP1-209ENST00000595803 POLR3DP05423 398 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 RPS6KB1P23443 525 aa15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 RPS12P25398 132 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 GMPSP49915 693 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 HIRAP54198 1017 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 CTDSPL2Q05D32 466 aa15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 MFSD6Q6ZSS7 791 aa15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 STOX1Q6ZVD7 989 aa15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 RALYLQ86SE5 291 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 TRPM4Q8TD43 1214 aa15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 ZC3H15Q8WU90 426 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 TBC1D2Q9BYX2 928 aa15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 RNF41Q9H4P4 317 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 ARPP21Q9UBL0 812 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 SZT2Q5T011 3432 aa15.45■□□□□ 0.06
SHKBP1-209ENST00000595803 CPA1P15085 419 aa15.44■□□□□ 0.06
SHKBP1-209ENST00000595803 AKNAD1Q5T1N1 836 aa15.44■□□□□ 0.06
SHKBP1-209ENST00000595803 DLK2Q6UY11 383 aa15.44■□□□□ 0.06
SHKBP1-209ENST00000595803 DHX32Q7L7V1 743 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-209ENST00000595803 CCDC102AQ96A19 550 aa15.44■□□□□ 0.06
SHKBP1-209ENST00000595803 KRT23Q9C075 422 aa15.44■□□□□ 0.06
SHKBP1-209ENST00000595803 ANAPC4Q9UJX5 808 aa15.44■□□□□ 0.06
SHKBP1-209ENST00000595803 HTTP42858 3142 aa15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 DLL1O00548 723 aa15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 SLC4A3P48751 1232 aa15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 ZNF157P51786 506 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 STK11IPQ8N1F8 1099 aa15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 DPF2Q92785 391 aa15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 PRMT6Q96LA8 375 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 CNNM2Q9H8M5 875 aa15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 SAP30BPQ9UHR5 308 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 PSME4Q14997 1843 aa15.43■□□□□ 0.06
SHKBP1-209ENST00000595803 CYP2D7A0A087X1C5 515 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 K7ELQ4 463 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 SLC10A3P09131 477 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 FGD1P98174 961 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 PICALMQ13492 652 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 ANKRD1Q15327 319 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 C12orf60Q5U649 245 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 TTC6Q86TZ1 520 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 TBC1D10CQ8IV04 446 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 CSRNP1Q96S65 589 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 NBPF3Q9H094 633 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 TDRD3Q9H7E2 651 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 GBA2Q9HCG7 927 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 TMOD2Q9NZR1 351 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 PCDHAC2Q9Y5I4 1007 aa15.42■□□□□ 0.06
SHKBP1-209ENST00000595803 CYP2D6P10635 497 aa15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 PCP11498 1178 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 MCM5P33992 734 aa15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 AK2P54819 239 aa15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 EXOSC10Q01780 885 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 RRP12Q5JTH9 1297 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 RBM26Q5T8P6 1007 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 MTMR14Q8NCE2 650 aa15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 TTC14Q96N46 770 aa15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 INCENPQ9NQS7 918 aa15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 CNOT7Q9UIV1 285 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 FLT1P17948 1338 aa15.41■□□□□ 0.06
SHKBP1-209ENST00000595803 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 B4E1Z4 1266 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 H7C1D1 291 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 MYO1BO43795 1136 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 WDHD1O75717 1129 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 CD2BP2O95400 341 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 PDE4BQ07343 736 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 Q6ZUG5 572 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 NOL8Q76FK4 1167 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 C2orf69Q8N8R5 385 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 ZNF296Q8WUU4 475 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 ZSCAN31Q96LW9 406 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 TCEANC2Q96MN5 208 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms