RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 DDX60Q8IY21 1712 aaKnown RBP17.63■□□□□ 0.41
ZNF541-205ENST00000595558 H2AFXP16104 143 aaPredicted RBP17.63■□□□□ 0.41
ZNF541-205ENST00000595558 KLRK1P26718 216 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 MYL5Q02045 173 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 GABPB1Q06547 395 aaPredicted RBP17.63■□□□□ 0.41
ZNF541-205ENST00000595558 NTRK3Q16288 839 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 AMIGO3Q86WK7 504 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 SDR42E1Q8WUS8 393 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 NUP98P52948 1817 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 GUCY1A2P33402 732 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 CLCN6P51797 869 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 ETF1P62495 437 aaKnown RBP17.63■□□□□ 0.41
ZNF541-205ENST00000595558 ARHGAP29Q52LW3 1261 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 RESP18Q5W5W9 173 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 CYP2D7A0A087X1C5 515 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 ERVV-1B6SEH8 477 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 CHRNDQ07001 517 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 REXO1L1PQ8IX06 675 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 ZSWIM5Q9P217 1185 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 TAF1P21675 1872 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 MYH14Q7Z406 1995 aaKnown RBP17.62■□□□□ 0.41
ZNF541-205ENST00000595558 NHSL1Q5SYE7 1610 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 ZNF827Q17R98 1081 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 IGDCC4Q8TDY8 1250 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 TIGD1Q96MW7 591 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 FBXO3Q9UK99 471 aa17.62■□□□□ 0.41
ZNF541-205ENST00000595558 PPP6R2O75170 966 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 NFXL1Q6ZNB6 911 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 VSTM4Q8IW00 320 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.61■□□□□ 0.41
ZNF541-205ENST00000595558 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
ZNF541-205ENST00000595558 LRP6O75581 1613 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 MYH7P12883 1935 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 NTSR2O95665 410 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 TMEM139Q8IV31 216 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 GRAMD1CQ8IYS0 662 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 IFNL3Q8IZI9 196 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 LINC00116Q8NCU8 138 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 CNNM3Q8NE01 707 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 LY9Q9HBG7 655 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 KCNH3Q9ULD8 1083 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 FHOD1Q9Y613 1164 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 ROBO1Q9Y6N7 1651 aa17.61■□□□□ 0.41
ZNF541-205ENST00000595558 hCG_1642624A0A1W2PR95 340 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 ZBTB43O43298 467 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 PRR29P0C7W0 189 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 ARID4AP29374 1257 aaPredicted RBP17.6■□□□□ 0.41
ZNF541-205ENST00000595558 KRBA2Q6ZNG9 492 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 C8orf37Q96NL8 207 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 SLC26A6Q9BXS9 759 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 KCNJ14Q9UNX9 436 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 GOLGA8AA7E2F4 631 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 GSG1L2A8MUP6 293 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 BTBD18B2RXH4 712 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 URI1O94763 535 aaPredicted RBP17.6■□□□□ 0.41
ZNF541-205ENST00000595558 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
ZNF541-205ENST00000595558 KCNJ6P48051 423 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 FMR1Q06787 632 aaKnown RBP eCLIP17.6■□□□□ 0.41
ZNF541-205ENST00000595558 TRMT44Q8IYL2 757 aaKnown RBP17.6■□□□□ 0.41
ZNF541-205ENST00000595558 LRP2BPQ9P2M1 347 aa17.6■□□□□ 0.41
ZNF541-205ENST00000595558 TOP1P11387 765 aaKnown RBP17.59■□□□□ 0.41
ZNF541-205ENST00000595558 TOB1P50616 345 aaPredicted RBP17.59■□□□□ 0.41
ZNF541-205ENST00000595558 TMEM67Q5HYA8 995 aa17.59■□□□□ 0.41
ZNF541-205ENST00000595558 VWA3AA6NCI4 1184 aa17.59■□□□□ 0.41
ZNF541-205ENST00000595558 MINDY4BA8MYZ0 360 aa17.59■□□□□ 0.41
ZNF541-205ENST00000595558 PRDM1O75626 825 aa17.59■□□□□ 0.41
ZNF541-205ENST00000595558 SLC5A1P13866 664 aa17.59■□□□□ 0.41
ZNF541-205ENST00000595558 COL16A1Q07092 1604 aaPredicted RBP17.59■□□□□ 0.41
ZNF541-205ENST00000595558 WDR19Q8NEZ3 1342 aa17.59■□□□□ 0.41
ZNF541-205ENST00000595558 CARD6Q9BX69 1037 aa17.59■□□□□ 0.41
ZNF541-205ENST00000595558 NAPBQ9H115 298 aa17.59■□□□□ 0.41
ZNF541-205ENST00000595558 ADKP55263 362 aaKnown RBP17.58■□□□□ 0.41
ZNF541-205ENST00000595558 MDM2Q00987 491 aaPredicted RBP17.58■□□□□ 0.41
ZNF541-205ENST00000595558 UBE3CQ15386 1083 aa17.58■□□□□ 0.41
ZNF541-205ENST00000595558 CELF1Q92879 486 aaKnown RBP17.58■□□□□ 0.41
ZNF541-205ENST00000595558 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.41
ZNF541-205ENST00000595558 SRCAPQ6ZRS2 3230 aa17.58■□□□□ 0.41
ZNF541-205ENST00000595558 FAM237AA0A1B0GTK4 181 aa17.58■□□□□ 0.4
ZNF541-205ENST00000595558 SEC31AO94979 1220 aaKnown RBP17.58■□□□□ 0.4
ZNF541-205ENST00000595558 PDILTQ8N807 584 aa17.58■□□□□ 0.4
ZNF541-205ENST00000595558 JMYQ8N9B5 988 aa17.58■□□□□ 0.4
ZNF541-205ENST00000595558 MED15Q96RN5 788 aa17.58■□□□□ 0.4
ZNF541-205ENST00000595558 WDR24Q96S15 920 aa17.58■□□□□ 0.4
ZNF541-205ENST00000595558 PARP3Q9Y6F1 533 aa17.58■□□□□ 0.4
ZNF541-205ENST00000595558 MROH5Q6ZUA9 1318 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 ERICH4A6NGS2 130 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 NRDCO43847 1150 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 ATP2B1P20020 1258 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 DYNLL1P63167 89 aaKnown RBP17.57■□□□□ 0.4
ZNF541-205ENST00000595558 OLFM4Q6UX06 510 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 TOGARAM2Q6ZUX3 1019 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 ABCC12Q96J65 1359 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 CDKL5O76039 1030 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
ZNF541-205ENST00000595558 TTF1Q15361 905 aaPredicted RBP17.57■□□□□ 0.4
ZNF541-205ENST00000595558 USP49Q70CQ1 688 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.57■□□□□ 0.4
ZNF541-205ENST00000595558 TFCP2L1Q9NZI6 479 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 MAN1B1Q9UKM7 699 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms