RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PBXIP1Q96AQ6 731 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 FAM89AQ96GI7 184 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 CCDC85AQ96PX6 553 aaPredicted RBP4.13□□□□□ -1.75
VRK3-204ENST00000593912 SIN3AQ96ST3 1273 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 FSD1Q9BTV5 496 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 MIS18AQ9NYP9 233 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 ZNF70Q9UC06 446 aaPredicted RBP4.13□□□□□ -1.75
VRK3-204ENST00000593912 MUTYHQ9UIF7 546 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 JAG2Q9Y219 1238 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 PHIPQ8WWQ0 1821 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 GAKO14976 1311 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 XDHP47989 1333 aa4.13□□□□□ -1.75
VRK3-204ENST00000593912 RPAP1Q9BWH6 1393 aaPredicted RBP4.13□□□□□ -1.75
VRK3-204ENST00000593912 DNM1LO00429 736 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 ARHGEF15O94989 841 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 MYCNP04198 464 aaPredicted RBP4.12□□□□□ -1.75
VRK3-204ENST00000593912 CLTBP09497 229 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 ZKSCAN1P17029 563 aaPredicted RBP4.12□□□□□ -1.75
VRK3-204ENST00000593912 KCNA5P22460 613 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 ATP2B4P23634 1241 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 IRS1P35568 1242 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 SNX17Q15036 470 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 SPDYE2Q495Y8 402 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 PTCRAQ6ISU1 281 aaPredicted RBP4.12□□□□□ -1.75
VRK3-204ENST00000593912 MIGA2Q7L4E1 593 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 SPRED2Q7Z698 418 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 FRMD5Q7Z6J6 570 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 PRRX2Q99811 253 aa4.12□□□□□ -1.75
VRK3-204ENST00000593912 UBE2ZQ9H832 354 aaPredicted RBP4.12□□□□□ -1.75
VRK3-204ENST00000593912 EP300Q09472 2414 aaPredicted RBP4.12□□□□□ -1.75
VRK3-204ENST00000593912 TMEM221A6NGB7 291 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 M0R296 226 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 KIAA0355O15063 1070 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 PQBP1O60828 265 aaKnown RBP4.11□□□□□ -1.75
VRK3-204ENST00000593912 KDM4AO75164 1064 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 POU3F3P20264 500 aaPredicted RBP4.11□□□□□ -1.75
VRK3-204ENST00000593912 CNGA1P29973 690 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 ADCYAP1R1P41586 468 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 MMP14P50281 582 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 ZP2Q05996 745 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 TNFAIP1Q13829 316 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 DCTN1Q14203 1278 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 PUM1Q14671 1186 aaKnown RBP eCLIP4.11□□□□□ -1.75
VRK3-204ENST00000593912 FAM110CQ1W6H9 321 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 PROSER3Q2NL68 480 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 LCE2DQ5TA82 110 aaPredicted RBP4.11□□□□□ -1.75
VRK3-204ENST00000593912 ZNF365Q70YC5 407 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 MCM10Q7L590 875 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 LRP10Q7Z4F1 713 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 SUGP1Q8IWZ8 645 aaKnown RBP4.11□□□□□ -1.75
VRK3-204ENST00000593912 KIAA2013Q8IYS2 634 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 LPAR1Q92633 364 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 CHAMP1Q96JM3 812 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 COA1Q9GZY4 146 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 TMEM39AQ9NV64 488 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 DDX20Q9UHI6 824 aaKnown RBP4.11□□□□□ -1.75
VRK3-204ENST00000593912 TACC3Q9Y6A5 838 aa4.11□□□□□ -1.75
VRK3-204ENST00000593912 SMG1Q96Q15 3661 aaKnown RBP4.1□□□□□ -1.75
VRK3-204ENST00000593912 LOC400499M0QZD8 3231 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 A0A0G2JLL6 359 aaPredicted RBP4.1□□□□□ -1.75
VRK3-204ENST00000593912 GRXCR2A6NFK2 248 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 H3BQ06 376 aaPredicted RBP4.1□□□□□ -1.75
VRK3-204ENST00000593912 APBB1O00213 710 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 CA3P07451 260 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 CSF2RAP15509 400 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 NBL1P41271 181 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 AIMP1Q12904 312 aaKnown RBP4.1□□□□□ -1.75
VRK3-204ENST00000593912 GRB10Q13322 594 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 NEUROD1Q13562 356 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 COL9A3Q14050 684 aaPredicted RBP4.1□□□□□ -1.75
VRK3-204ENST00000593912 LEXMQ3ZCV2 418 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 TREML2Q5T2D2 321 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 BMP8AQ7Z5Y6 402 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 PRRT2Q7Z6L0 340 aaPredicted RBP4.1□□□□□ -1.75
VRK3-204ENST00000593912 CCDC84Q86UT8 332 aaPredicted RBP4.1□□□□□ -1.75
VRK3-204ENST00000593912 FBXL6Q8N531 539 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 SLC44A5Q8NCS7 719 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 TRPV1Q8NER1 839 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 ARNTL2Q8WYA1 636 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 FLRT1Q9NZU1 646 aa4.1□□□□□ -1.75
VRK3-204ENST00000593912 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.1□□□□□ -1.75
VRK3-204ENST00000593912 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.09□□□□□ -1.75
VRK3-204ENST00000593912 C19orf67A6NJJ6 358 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 SOBPA7XYQ1 873 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 KBTBD13C9JR72 458 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 SNAP23O00161 211 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 IRS4O14654 1257 aaPredicted RBP4.09□□□□□ -1.75
VRK3-204ENST00000593912 LPXNO60711 386 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 AVPR2P30518 371 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 CCT4P50991 539 aaKnown RBP4.09□□□□□ -1.75
VRK3-204ENST00000593912 FAAP100Q0VG06 881 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 HERC4Q5GLZ8 1057 aaPredicted RBP4.09□□□□□ -1.75
VRK3-204ENST00000593912 EPHA10Q5JZY3 1008 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 TRIM67Q6ZTA4 783 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 COPS6Q7L5N1 327 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 OTOP2Q7RTS6 562 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 CRACR2BQ8N4Y2 399 aaPredicted RBP4.09□□□□□ -1.75
VRK3-204ENST00000593912 GAS2L2Q8NHY3 880 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 GDPD5Q8WTR4 605 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 EDAQ92838 391 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms