RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
ZNF558-202ENST00000593891 ASCC2Q9H1I8 757 aaPredicted RBP15.13■□□□□ 0.01
ZNF558-202ENST00000593891 TMEM39AQ9NV64 488 aa15.13■□□□□ 0.01
ZNF558-202ENST00000593891 LRRFIP2Q9Y608 721 aaKnown RBP15.13■□□□□ 0.01
ZNF558-202ENST00000593891 UTYO14607 1347 aa15.13■□□□□ 0.01
ZNF558-202ENST00000593891 MAPK8IP3Q9UPT6 1336 aa15.13■□□□□ 0.01
ZNF558-202ENST00000593891 MYO9BQ13459 2157 aa15.12■□□□□ 0.01
ZNF558-202ENST00000593891 GFRA3O60609 400 aa15.12■□□□□ 0.01
ZNF558-202ENST00000593891 ADCYAP1R1P41586 468 aa15.12■□□□□ 0.01
ZNF558-202ENST00000593891 GRIK5Q16478 980 aa15.12■□□□□ 0.01
ZNF558-202ENST00000593891 PNNQ9H307 717 aaKnown RBP15.12■□□□□ 0.01
ZNF558-202ENST00000593891 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
ZNF558-202ENST00000593891 ANKRD18BA2A2Z9 1011 aa15.11■□□□□ 0.01
ZNF558-202ENST00000593891 DDX58O95786 925 aaKnown RBP15.11■□□□□ 0.01
ZNF558-202ENST00000593891 MORN1Q5T089 497 aa15.11■□□□□ 0.01
ZNF558-202ENST00000593891 FERMT2Q96AC1 680 aa15.11■□□□□ 0.01
ZNF558-202ENST00000593891 EDC3Q96F86 508 aaKnown RBP15.11■□□□□ 0.01
ZNF558-202ENST00000593891 MFSD14AQ96MC6 490 aa15.11■□□□□ 0.01
ZNF558-202ENST00000593891 PLEKHF1Q96S99 279 aa15.11■□□□□ 0.01
ZNF558-202ENST00000593891 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
ZNF558-202ENST00000593891 MAST3O60307 1309 aa15.11■□□□□ 0.01
ZNF558-202ENST00000593891 PLIN1O60240 522 aa15.1■□□□□ 0.01
ZNF558-202ENST00000593891 CTNND1O60716 968 aaKnown RBP15.1■□□□□ 0.01
ZNF558-202ENST00000593891 KRT37O76014 449 aa15.1■□□□□ 0.01
ZNF558-202ENST00000593891 SSTR3P32745 418 aaPredicted RBP15.1■□□□□ 0.01
ZNF558-202ENST00000593891 RASIP1Q5U651 963 aa15.1■□□□□ 0.01
ZNF558-202ENST00000593891 HHIPL2Q6UWX4 724 aa15.1■□□□□ 0.01
ZNF558-202ENST00000593891 PLEKHH3Q7Z736 793 aa15.1■□□□□ 0.01
ZNF558-202ENST00000593891 SPEF2Q9C093 1822 aa15.1■□□□□ 0.01
ZNF558-202ENST00000593891 CACNA1BQ00975 2339 aa15.1■□□□□ 0.01
ZNF558-202ENST00000593891 POU3F3P20264 500 aaPredicted RBP15.09■□□□□ 0.01
ZNF558-202ENST00000593891 GYG1P46976 350 aa15.09■□□□□ 0.01
ZNF558-202ENST00000593891 PTPN5P54829 565 aa15.09■□□□□ 0.01
ZNF558-202ENST00000593891 IRX3P78415 501 aaPredicted RBP15.09■□□□□ 0.01
ZNF558-202ENST00000593891 ATP2B2Q01814 1243 aa15.09■□□□□ 0.01
ZNF558-202ENST00000593891 MAP2K5Q13163 448 aa15.09■□□□□ 0.01
ZNF558-202ENST00000593891 PPIGQ13427 754 aaKnown RBP eCLIP15.09■□□□□ 0.01
ZNF558-202ENST00000593891 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
ZNF558-202ENST00000593891 GPR142Q7Z601 462 aa15.09■□□□□ 0.01
ZNF558-202ENST00000593891 SLC44A5Q8NCS7 719 aa15.09■□□□□ 0.01
ZNF558-202ENST00000593891 MTCH2Q9Y6C9 303 aa15.09■□□□□ 0.01
ZNF558-202ENST00000593891 SPTBN4Q9H254 2564 aa15.08■□□□□ 0
ZNF558-202ENST00000593891 PQBP1O60828 265 aaKnown RBP15.08■□□□□ 0
ZNF558-202ENST00000593891 FRAT2O75474 233 aaPredicted RBP15.08■□□□□ 0
ZNF558-202ENST00000593891 RIPK4P57078 832 aa15.08■□□□□ 0
ZNF558-202ENST00000593891 CHAF1AQ13111 956 aaPredicted RBP15.08■□□□□ 0
ZNF558-202ENST00000593891 PPP2R2DQ66LE6 453 aa15.08■□□□□ 0
ZNF558-202ENST00000593891 CHD9Q3L8U1 2897 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 LRRC37A2A6NM11 1700 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 CHL1O00533 1208 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
ZNF558-202ENST00000593891 CSF1RP07333 972 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 NEXNQ0ZGT2 675 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 SPP2Q13103 211 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 UBE3BQ7Z3V4 1068 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 FAM84BQ96KN1 310 aaPredicted RBP15.07■□□□□ 0
ZNF558-202ENST00000593891 PLA2G12BQ9BX93 195 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 MTIF3Q9H2K0 278 aaKnown RBP15.07■□□□□ 0
ZNF558-202ENST00000593891 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.07■□□□□ 0
ZNF558-202ENST00000593891 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
ZNF558-202ENST00000593891 LAS1LQ9Y4W2 734 aaKnown RBP15.07■□□□□ 0
ZNF558-202ENST00000593891 CFAP54Q96N23 3096 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 DCXO43602 365 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 TIMP1P01033 207 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 HMGCS2P54868 508 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 LMOD3Q0VAK6 560 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 PSRC1Q6PGN9 363 aaPredicted RBP15.06■□□□□ 0
ZNF558-202ENST00000593891 C16orf59Q7L2K0 433 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 VPS37DQ86XT2 251 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 FLRT1Q9NZU1 646 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 YBX2Q9Y2T7 364 aaKnown RBP15.06■□□□□ 0
ZNF558-202ENST00000593891 MAP3K2Q9Y2U5 619 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 SUGT1Q9Y2Z0 365 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 PLXNB2O15031 1838 aa15.06■□□□□ 0
ZNF558-202ENST00000593891 DLG5Q8TDM6 1919 aa15.05■□□□□ 0
ZNF558-202ENST00000593891 PKD1L2Q7Z442 2459 aa15.05■□□□□ 0
ZNF558-202ENST00000593891 ZFHX2Q9C0A1 2572 aaPredicted RBP15.05■□□□□ 0
ZNF558-202ENST00000593891 DCDC2CA8MYV0 355 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 H7C1W4 665 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 IGKV5-2P06315 115 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 SLC5A1P13866 664 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 NFIAQ12857 509 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 IFIT5Q13325 482 aaKnown RBP15.05■□□□□ -0
ZNF558-202ENST00000593891 DUSP27Q5VZP5 1158 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 MFSD5Q6N075 450 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 ZNF365Q70YC5 407 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 CCDC84Q86UT8 332 aaPredicted RBP15.05■□□□□ -0
ZNF558-202ENST00000593891 FAM178BQ8IXR5 827 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 ZNF280CQ8ND82 737 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 PRRX2Q99811 253 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 TXNRD2Q9NNW7 524 aa15.05■□□□□ -0
ZNF558-202ENST00000593891 ZNF521Q96K83 1311 aa15.04■□□□□ -0
ZNF558-202ENST00000593891 PEX10O60683 326 aa15.04■□□□□ -0
ZNF558-202ENST00000593891 RGS20O76081 388 aa15.04■□□□□ -0
ZNF558-202ENST00000593891 PPP2R1AP30153 589 aa15.04■□□□□ -0
ZNF558-202ENST00000593891 CYP2C19P33261 490 aa15.04■□□□□ -0
ZNF558-202ENST00000593891 UBE4AQ14139 1066 aa15.04■□□□□ -0
ZNF558-202ENST00000593891 LRRC41Q15345 812 aa15.04■□□□□ -0
ZNF558-202ENST00000593891 CDC42EP5Q6NZY7 148 aa15.04■□□□□ -0
ZNF558-202ENST00000593891 TBC1D2Q9BYX2 928 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms