RNA–Protein interactions for RNA: ENST00000592954.1

APOC4-202, Transcript of apolipoprotein C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC4, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-202ENST00000592954 HSP90AB4PQ58FF6 505 aa16.45■□□□□ 0.22
APOC4-202ENST00000592954 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
APOC4-202ENST00000592954 PRRT2Q7Z6L0 340 aaPredicted RBP16.45■□□□□ 0.22
APOC4-202ENST00000592954 ADGRA1Q86SQ6 560 aa16.45■□□□□ 0.22
APOC4-202ENST00000592954 NBPF11Q86T75 865 aa16.45■□□□□ 0.22
APOC4-202ENST00000592954 DDX19BQ9UMR2 479 aa16.45■□□□□ 0.22
APOC4-202ENST00000592954 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
APOC4-202ENST00000592954 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
APOC4-202ENST00000592954 PSMC4P43686 418 aa16.44■□□□□ 0.22
APOC4-202ENST00000592954 PPP4CP60510 307 aa16.44■□□□□ 0.22
APOC4-202ENST00000592954 DYNLL1P63167 89 aaKnown RBP16.44■□□□□ 0.22
APOC4-202ENST00000592954 RPAP2Q8IXW5 612 aaPredicted RBP16.44■□□□□ 0.22
APOC4-202ENST00000592954 RHPN1Q8TCX5 695 aa16.44■□□□□ 0.22
APOC4-202ENST00000592954 ARMC5Q96C12 935 aa16.44■□□□□ 0.22
APOC4-202ENST00000592954 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
APOC4-202ENST00000592954 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
APOC4-202ENST00000592954 HMMRO75330 724 aa16.43■□□□□ 0.22
APOC4-202ENST00000592954 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
APOC4-202ENST00000592954 MAGEB6Q8N7X4 407 aa16.43■□□□□ 0.22
APOC4-202ENST00000592954 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
APOC4-202ENST00000592954 TMEM106CQ9BVX2 250 aa16.43■□□□□ 0.22
APOC4-202ENST00000592954 DHX36Q9H2U1 1008 aaKnown RBP16.43■□□□□ 0.22
APOC4-202ENST00000592954 SAP30BPQ9UHR5 308 aaKnown RBP16.43■□□□□ 0.22
APOC4-202ENST00000592954 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
APOC4-202ENST00000592954 GNRH1P01148 92 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 HOXD10P28358 340 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 CAP2P40123 477 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 SPP2Q13103 211 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 CLASRPQ8N2M8 674 aaKnown RBP16.42■□□□□ 0.22
APOC4-202ENST00000592954 SMCR8Q8TEV9 937 aaPredicted RBP16.42■□□□□ 0.22
APOC4-202ENST00000592954 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 TRIM47Q96LD4 638 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 CHMP4BQ9H444 224 aaKnown RBP16.42■□□□□ 0.22
APOC4-202ENST00000592954 ANTXR1Q9H6X2 564 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 PALD1Q9ULE6 856 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 FLT1P17948 1338 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
APOC4-202ENST00000592954 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
APOC4-202ENST00000592954 IGSF3O75054 1194 aa16.41■□□□□ 0.22
APOC4-202ENST00000592954 CTGFP29279 349 aa16.41■□□□□ 0.22
APOC4-202ENST00000592954 PRMT2P55345 433 aa16.41■□□□□ 0.22
APOC4-202ENST00000592954 MAP3K12Q12852 859 aa16.41■□□□□ 0.22
APOC4-202ENST00000592954 RRP1BQ14684 758 aaKnown RBP16.41■□□□□ 0.22
APOC4-202ENST00000592954 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
APOC4-202ENST00000592954 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
APOC4-202ENST00000592954 ZNF333Q96JL9 665 aa16.41■□□□□ 0.22
APOC4-202ENST00000592954 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
APOC4-202ENST00000592954 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
APOC4-202ENST00000592954 EN2P19622 333 aaPredicted RBP16.4■□□□□ 0.22
APOC4-202ENST00000592954 OSBPP22059 807 aa16.4■□□□□ 0.22
APOC4-202ENST00000592954 USP5P45974 858 aa16.4■□□□□ 0.22
APOC4-202ENST00000592954 FCGRTP55899 365 aa16.4■□□□□ 0.22
APOC4-202ENST00000592954 FOXP4Q8IVH2 680 aaPredicted RBP16.4■□□□□ 0.22
APOC4-202ENST00000592954 SIRT2Q8IXJ6 389 aa16.4■□□□□ 0.22
APOC4-202ENST00000592954 RAET1EQ8TD07 263 aa16.4■□□□□ 0.22
APOC4-202ENST00000592954 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
APOC4-202ENST00000592954 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
APOC4-202ENST00000592954 DOCK1Q14185 1865 aa16.39■□□□□ 0.22
APOC4-202ENST00000592954 MAST2Q6P0Q8 1798 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 HLA-DOAP06340 250 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 BCRP11274 1271 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 HMGCS2P54868 508 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 TREML2Q5T2D2 321 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 DNAJC2Q99543 621 aaKnown RBP16.39■□□□□ 0.21
APOC4-202ENST00000592954 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 SLC45A1Q9Y2W3 748 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 ZSWIM8A7E2V4 1837 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
APOC4-202ENST00000592954 TTF1Q15361 905 aaPredicted RBP16.38■□□□□ 0.21
APOC4-202ENST00000592954 C20orf194Q5TEA3 1177 aa16.38■□□□□ 0.21
APOC4-202ENST00000592954 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
APOC4-202ENST00000592954 BIN2Q9UBW5 565 aaPredicted RBP16.38■□□□□ 0.21
APOC4-202ENST00000592954 PNMA3Q9UL41 463 aa16.38■□□□□ 0.21
APOC4-202ENST00000592954 MYO5AQ9Y4I1 1855 aaKnown RBP16.37■□□□□ 0.21
APOC4-202ENST00000592954 RAB11FIP3O75154 756 aa16.37■□□□□ 0.21
APOC4-202ENST00000592954 GDF11O95390 407 aa16.37■□□□□ 0.21
APOC4-202ENST00000592954 ASNSP08243 561 aa16.37■□□□□ 0.21
APOC4-202ENST00000592954 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
APOC4-202ENST00000592954 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
APOC4-202ENST00000592954 PROCA1Q8NCQ7 364 aaPredicted RBP16.37■□□□□ 0.21
APOC4-202ENST00000592954 MAGEB6P1A0A0J9YX57 407 aa16.36■□□□□ 0.21
APOC4-202ENST00000592954 GOLIM4O00461 696 aa16.36■□□□□ 0.21
APOC4-202ENST00000592954 GRK4P32298 578 aa16.36■□□□□ 0.21
APOC4-202ENST00000592954 JAG1P78504 1218 aa16.36■□□□□ 0.21
APOC4-202ENST00000592954 PRKCZQ05513 592 aa16.36■□□□□ 0.21
APOC4-202ENST00000592954 PABPC4Q13310 644 aaKnown RBP eCLIP16.36■□□□□ 0.21
APOC4-202ENST00000592954 SLC9C2Q5TAH2 1124 aa16.36■□□□□ 0.21
APOC4-202ENST00000592954 DNAJC18Q9H819 358 aa16.36■□□□□ 0.21
APOC4-202ENST00000592954 TNPO2O14787 897 aaKnown RBP16.35■□□□□ 0.21
APOC4-202ENST00000592954 MTMR2Q13614 643 aa16.35■□□□□ 0.21
APOC4-202ENST00000592954 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
APOC4-202ENST00000592954 SHROOM1Q2M3G4 852 aaPredicted RBP16.35■□□□□ 0.21
APOC4-202ENST00000592954 TMOD4Q9NZQ9 345 aa16.35■□□□□ 0.21
APOC4-202ENST00000592954 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
APOC4-202ENST00000592954 PHIPQ8WWQ0 1821 aa16.35■□□□□ 0.21
APOC4-202ENST00000592954 KIAA0100Q14667 2235 aaKnown RBP16.34■□□□□ 0.21
APOC4-202ENST00000592954 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
APOC4-202ENST00000592954 PDE6AP16499 860 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms