RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 DIEXFQ68CQ4 756 aaKnown RBP23.11■■□□□ 1.29
CCDC43-205ENST00000592333 NKX2-3Q8TAU0 364 aa23.11■■□□□ 1.29
CCDC43-205ENST00000592333 RAET1EQ8TD07 263 aa23.11■■□□□ 1.29
CCDC43-205ENST00000592333 PNMA3Q9UL41 463 aa23.11■■□□□ 1.29
CCDC43-205ENST00000592333 PHIPQ8WWQ0 1821 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 MS4A1P11836 297 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 GRK4P32298 578 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 CAP2P40123 477 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 GADL1Q6ZQY3 521 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 METTL16Q86W50 562 aaKnown RBP23.1■■□□□ 1.29
CCDC43-205ENST00000592333 SH3TC2Q8TF17 1288 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 GINM1Q9NU53 330 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 PCDH10Q9P2E7 1040 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 MKI67P46013 3256 aaKnown RBP23.1■■□□□ 1.29
CCDC43-205ENST00000592333 PTPRFP10586 1907 aa23.1■■□□□ 1.29
CCDC43-205ENST00000592333 MYPNQ86TC9 1320 aa23.09■■□□□ 1.29
CCDC43-205ENST00000592333 MAST2Q6P0Q8 1798 aa23.09■■□□□ 1.29
CCDC43-205ENST00000592333 TRIM75PA6NK02 468 aa23.09■■□□□ 1.29
CCDC43-205ENST00000592333 CYP2E1P05181 493 aaPredicted RBP23.09■■□□□ 1.29
CCDC43-205ENST00000592333 ERC1Q8IUD2 1116 aa23.09■■□□□ 1.29
CCDC43-205ENST00000592333 FOXP4Q8IVH2 680 aaPredicted RBP23.09■■□□□ 1.29
CCDC43-205ENST00000592333 ZNF280CQ8ND82 737 aa23.09■■□□□ 1.29
CCDC43-205ENST00000592333 RLBP1P12271 317 aa23.08■■□□□ 1.29
CCDC43-205ENST00000592333 PABPC4Q13310 644 aaKnown RBP eCLIP23.08■■□□□ 1.29
CCDC43-205ENST00000592333 SLAIN1Q8ND83 568 aa23.08■■□□□ 1.29
CCDC43-205ENST00000592333 SH3RF3Q8TEJ3 882 aaPredicted RBP23.08■■□□□ 1.29
CCDC43-205ENST00000592333 SMCR8Q8TEV9 937 aaPredicted RBP23.08■■□□□ 1.29
CCDC43-205ENST00000592333 AS3MTQ9HBK9 375 aa23.08■■□□□ 1.29
CCDC43-205ENST00000592333 ZSWIM8A7E2V4 1837 aa23.08■■□□□ 1.28
CCDC43-205ENST00000592333 USP17L5A8MUK1 530 aa23.07■■□□□ 1.28
CCDC43-205ENST00000592333 HSP90AB4PQ58FF6 505 aa23.07■■□□□ 1.28
CCDC43-205ENST00000592333 SH3D19Q5HYK7 790 aa23.07■■□□□ 1.28
CCDC43-205ENST00000592333 SNRKQ9NRH2 765 aa23.07■■□□□ 1.28
CCDC43-205ENST00000592333 AATFQ9NY61 560 aaKnown RBP eCLIP23.07■■□□□ 1.28
CCDC43-205ENST00000592333 DBNLQ9UJU6 430 aaKnown RBP23.07■■□□□ 1.28
CCDC43-205ENST00000592333 ASNSP08243 561 aa23.06■■□□□ 1.28
CCDC43-205ENST00000592333 GCLCP48506 637 aaPredicted RBP23.06■■□□□ 1.28
CCDC43-205ENST00000592333 UBXN2AP68543 259 aa23.06■■□□□ 1.28
CCDC43-205ENST00000592333 SPP2Q13103 211 aa23.06■■□□□ 1.28
CCDC43-205ENST00000592333 CEP85Q6P2H3 762 aa23.06■■□□□ 1.28
CCDC43-205ENST00000592333 WDR18Q9BV38 432 aa23.06■■□□□ 1.28
CCDC43-205ENST00000592333 C1orf115Q9H7X2 142 aa23.06■■□□□ 1.28
CCDC43-205ENST00000592333 SLURP2P0DP57 97 aa23.05■■□□□ 1.28
CCDC43-205ENST00000592333 ZAP70P43403 619 aa23.05■■□□□ 1.28
CCDC43-205ENST00000592333 IRF5Q13568 498 aa23.05■■□□□ 1.28
CCDC43-205ENST00000592333 FAM110CQ1W6H9 321 aa23.05■■□□□ 1.28
CCDC43-205ENST00000592333 PXYLP1Q8TE99 480 aa23.05■■□□□ 1.28
CCDC43-205ENST00000592333 EAF2Q96CJ1 260 aaPredicted RBP23.05■■□□□ 1.28
CCDC43-205ENST00000592333 MGAMO43451 1857 aa23.05■■□□□ 1.28
CCDC43-205ENST00000592333 GJB1P08034 283 aa23.04■■□□□ 1.28
CCDC43-205ENST00000592333 PRKCZQ05513 592 aa23.04■■□□□ 1.28
CCDC43-205ENST00000592333 TGFBRAP1Q8WUH2 860 aa23.04■■□□□ 1.28
CCDC43-205ENST00000592333 FLT1P17948 1338 aa23.04■■□□□ 1.28
CCDC43-205ENST00000592333 FAM196BA6NMK8 535 aa23.03■■□□□ 1.28
CCDC43-205ENST00000592333 GJA8P48165 433 aa23.03■■□□□ 1.28
CCDC43-205ENST00000592333 LOC285556D6RIA3 1793 aa23.02■■□□□ 1.28
CCDC43-205ENST00000592333 C19orf81C9J6K1 198 aa23.02■■□□□ 1.28
CCDC43-205ENST00000592333 TNPO2O14787 897 aaKnown RBP23.02■■□□□ 1.28
CCDC43-205ENST00000592333 ADGRA1Q86SQ6 560 aa23.02■■□□□ 1.28
CCDC43-205ENST00000592333 CCDC8Q9H0W5 538 aaPredicted RBP23.02■■□□□ 1.28
CCDC43-205ENST00000592333 PIH1D3Q9NQM4 214 aaKnown RBP23.02■■□□□ 1.28
CCDC43-205ENST00000592333 FOCADQ5VW36 1801 aa23.02■■□□□ 1.28
CCDC43-205ENST00000592333 HLA-DOAP06340 250 aa23.01■■□□□ 1.27
CCDC43-205ENST00000592333 MAP3K12Q12852 859 aa23.01■■□□□ 1.27
CCDC43-205ENST00000592333 MTFR1Q15390 333 aa23.01■■□□□ 1.27
CCDC43-205ENST00000592333 TREML2Q5T2D2 321 aa23.01■■□□□ 1.27
CCDC43-205ENST00000592333 RPAP2Q8IXW5 612 aaPredicted RBP23.01■■□□□ 1.27
CCDC43-205ENST00000592333 COA7Q96BR5 231 aa23.01■■□□□ 1.27
CCDC43-205ENST00000592333 TRIM34Q9BYJ4 488 aa23.01■■□□□ 1.27
CCDC43-205ENST00000592333 CHMP4BQ9H444 224 aaKnown RBP23.01■■□□□ 1.27
CCDC43-205ENST00000592333 ATAD5Q96QE3 1844 aa23.01■■□□□ 1.27
CCDC43-205ENST00000592333 ADCY3O60266 1144 aa23■■□□□ 1.27
CCDC43-205ENST00000592333 CCL5P13501 91 aa23■■□□□ 1.27
CCDC43-205ENST00000592333 CYP7A1P22680 504 aa23■■□□□ 1.27
CCDC43-205ENST00000592333 HOXA7P31268 230 aaPredicted RBP23■■□□□ 1.27
CCDC43-205ENST00000592333 FLT3LGP49771 235 aa23■■□□□ 1.27
CCDC43-205ENST00000592333 HMGCS2P54868 508 aa23■■□□□ 1.27
CCDC43-205ENST00000592333 BACE1P56817 501 aa23■■□□□ 1.27
CCDC43-205ENST00000592333 RRP1BQ14684 758 aaKnown RBP23■■□□□ 1.27
CCDC43-205ENST00000592333 MAPKAPK5Q8IW41 473 aa23■■□□□ 1.27
CCDC43-205ENST00000592333 CRACR2BQ8N4Y2 399 aaPredicted RBP23■■□□□ 1.27
CCDC43-205ENST00000592333 ANKRD13CQ8N6S4 541 aa23■■□□□ 1.27
CCDC43-205ENST00000592333 TLR7Q9NYK1 1049 aaKnown RBP23■■□□□ 1.27
CCDC43-205ENST00000592333 FRMD4AQ9P2Q2 1039 aaPredicted RBP23■■□□□ 1.27
CCDC43-205ENST00000592333 BIN2Q9UBW5 565 aaPredicted RBP23■■□□□ 1.27
CCDC43-205ENST00000592333 MYCP01106 439 aaPredicted RBP22.99■■□□□ 1.27
CCDC43-205ENST00000592333 TTF1Q15361 905 aaPredicted RBP22.99■■□□□ 1.27
CCDC43-205ENST00000592333 CCDC84Q86UT8 332 aaPredicted RBP22.99■■□□□ 1.27
CCDC43-205ENST00000592333 RNF208Q9H0X6 261 aa22.99■■□□□ 1.27
CCDC43-205ENST00000592333 GABRQQ9UN88 632 aa22.99■■□□□ 1.27
CCDC43-205ENST00000592333 HMMRO75330 724 aa22.98■■□□□ 1.27
CCDC43-205ENST00000592333 IDH1O75874 414 aaKnown RBP22.98■■□□□ 1.27
CCDC43-205ENST00000592333 ASCC2Q9H1I8 757 aaPredicted RBP22.98■■□□□ 1.27
CCDC43-205ENST00000592333 EHD4Q9H223 541 aa22.98■■□□□ 1.27
CCDC43-205ENST00000592333 DNAJC18Q9H819 358 aa22.98■■□□□ 1.27
CCDC43-205ENST00000592333 TMOD4Q9NZQ9 345 aa22.98■■□□□ 1.27
CCDC43-205ENST00000592333 PALD1Q9ULE6 856 aa22.98■■□□□ 1.27
CCDC43-205ENST00000592333 DDX19BQ9UMR2 479 aa22.98■■□□□ 1.27
CCDC43-205ENST00000592333 SIPA1L1O43166 1804 aa22.98■■□□□ 1.27
CCDC43-205ENST00000592333 CDK5RAP2Q96SN8 1893 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms