RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 PHF20L1A8MW92 1017 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 TBC1D12O60347 775 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 BAG3O95817 575 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 PYGBP11216 843 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 CAP1Q01518 475 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 MAP3K10Q02779 954 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 ITPRIPQ8IWB1 547 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 NSUN4Q96CB9 384 aaKnown RBP12.44□□□□□ -0.42
VMP1-214ENST00000592106 ARHGAP39Q9C0H5 1083 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 OSBPL5Q9H0X9 879 aaPredicted RBP12.44□□□□□ -0.42
VMP1-214ENST00000592106 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 PNMA3Q9UL41 463 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 TNNQ9UQP3 1299 aa12.44□□□□□ -0.42
VMP1-214ENST00000592106 MYPNQ86TC9 1320 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 EN2P19622 333 aaPredicted RBP12.43□□□□□ -0.42
VMP1-214ENST00000592106 OSBPP22059 807 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 MCAMP43121 646 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 RHBDL3P58872 404 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 UBXN2AP68543 259 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 TNNI3KQ59H18 835 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 NAA16Q6N069 864 aaPredicted RBP12.43□□□□□ -0.42
VMP1-214ENST00000592106 SH3BP5LQ7L8J4 393 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 NKX2-3Q8TAU0 364 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 SMCR8Q8TEV9 937 aaPredicted RBP12.43□□□□□ -0.42
VMP1-214ENST00000592106 SH3TC2Q8TF17 1288 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 TRIM47Q96LD4 638 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 FPGT-TNNI3KV9GXZ4 949 aa12.43□□□□□ -0.42
VMP1-214ENST00000592106 ZSWIM8A7E2V4 1837 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 SURF6O75683 361 aaKnown RBP12.42□□□□□ -0.42
VMP1-214ENST00000592106 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
VMP1-214ENST00000592106 GRK4P32298 578 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 ATP8B2P98198 1209 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
VMP1-214ENST00000592106 MOGSQ13724 837 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 PI16Q6UXB8 463 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 TBC1D9Q6ZT07 1266 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 SSH3Q8TE77 659 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 AS3MTQ9HBK9 375 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 HERC5Q9UII4 1024 aaKnown RBP12.42□□□□□ -0.42
VMP1-214ENST00000592106 AGTPBP1Q9UPW5 1226 aa12.42□□□□□ -0.42
VMP1-214ENST00000592106 TRIM75PA6NK02 468 aa12.41□□□□□ -0.42
VMP1-214ENST00000592106 MYCP01106 439 aaPredicted RBP12.41□□□□□ -0.42
VMP1-214ENST00000592106 CYP2C8P10632 490 aa12.41□□□□□ -0.42
VMP1-214ENST00000592106 BCRP11274 1271 aa12.41□□□□□ -0.42
VMP1-214ENST00000592106 GPAT2Q6NUI2 795 aa12.41□□□□□ -0.42
VMP1-214ENST00000592106 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
VMP1-214ENST00000592106 SLAIN1Q8ND83 568 aa12.41□□□□□ -0.42
VMP1-214ENST00000592106 DHX36Q9H2U1 1008 aaKnown RBP12.41□□□□□ -0.42
VMP1-214ENST00000592106 BIN2Q9UBW5 565 aaPredicted RBP12.41□□□□□ -0.42
VMP1-214ENST00000592106 MAP3K13O43283 966 aa12.4□□□□□ -0.42
VMP1-214ENST00000592106 MS4A1P11836 297 aa12.4□□□□□ -0.42
VMP1-214ENST00000592106 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.42
VMP1-214ENST00000592106 PROCA1Q8NCQ7 364 aaPredicted RBP12.4□□□□□ -0.42
VMP1-214ENST00000592106 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
VMP1-214ENST00000592106 ZNF384Q8TF68 577 aa12.4□□□□□ -0.42
VMP1-214ENST00000592106 ZNF512BQ96KM6 892 aaPredicted RBP12.4□□□□□ -0.42
VMP1-214ENST00000592106 DBNDD2Q9BQY9 259 aa12.4□□□□□ -0.42
VMP1-214ENST00000592106 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
VMP1-214ENST00000592106 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.4□□□□□ -0.42
VMP1-214ENST00000592106 PTPRFP10586 1907 aa12.4□□□□□ -0.42
VMP1-214ENST00000592106 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
VMP1-214ENST00000592106 HLA-DOAP06340 250 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 CAP2P40123 477 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
VMP1-214ENST00000592106 CRACR2BQ8N4Y2 399 aaPredicted RBP12.39□□□□□ -0.43
VMP1-214ENST00000592106 SH3RF3Q8TEJ3 882 aaPredicted RBP12.39□□□□□ -0.43
VMP1-214ENST00000592106 COA7Q96BR5 231 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 C1orf115Q9H7X2 142 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 SNRKQ9NRH2 765 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 GINM1Q9NU53 330 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 AATFQ9NY61 560 aaKnown RBP eCLIP12.39□□□□□ -0.43
VMP1-214ENST00000592106 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
VMP1-214ENST00000592106 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 PHIPQ8WWQ0 1821 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 ATAD5Q96QE3 1844 aa12.39□□□□□ -0.43
VMP1-214ENST00000592106 ZBED9Q6R2W3 1325 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 MGAMO43451 1857 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 FAM196BA6NMK8 535 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 GABBR2O75899 941 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 ASNSP08243 561 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 CAPN2P17655 700 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 CTGFP29279 349 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 GCLCP48506 637 aaPredicted RBP12.38□□□□□ -0.43
VMP1-214ENST00000592106 PRKCZQ05513 592 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 SPP2Q13103 211 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 FAM110CQ1W6H9 321 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 HSP90AB4PQ58FF6 505 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 DIEXFQ68CQ4 756 aaKnown RBP12.38□□□□□ -0.43
VMP1-214ENST00000592106 TMED8Q6PL24 325 aaPredicted RBP12.38□□□□□ -0.43
VMP1-214ENST00000592106 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
VMP1-214ENST00000592106 FLT1P17948 1338 aa12.37□□□□□ -0.43
VMP1-214ENST00000592106 ZBTB7BO15156 539 aaPredicted RBP12.37□□□□□ -0.43
VMP1-214ENST00000592106 CYP2E1P05181 493 aaPredicted RBP12.37□□□□□ -0.43
VMP1-214ENST00000592106 ZAP70P43403 619 aa12.37□□□□□ -0.43
VMP1-214ENST00000592106 PPP4CP60510 307 aa12.37□□□□□ -0.43
VMP1-214ENST00000592106 CCDC84Q86UT8 332 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms