RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 AATFQ9NY61 560 aaKnown RBP eCLIP24.08■■□□□ 1.45
TNFRSF11A-204ENST00000592013 DDX19BQ9UMR2 479 aa24.08■■□□□ 1.45
TNFRSF11A-204ENST00000592013 HLA-DOAP06340 250 aa24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 RLBP1P12271 317 aa24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 MAP3K12Q12852 859 aa24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 GPAT2Q6NUI2 795 aa24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 RPAP2Q8IXW5 612 aaPredicted RBP24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CRACR2BQ8N4Y2 399 aaPredicted RBP24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 SH3RF3Q8TEJ3 882 aaPredicted RBP24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 TRIM47Q96LD4 638 aa24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 AGTPBP1Q9UPW5 1226 aa24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 ADGRA2Q96PE1 1338 aa24.07■■□□□ 1.44
TNFRSF11A-204ENST00000592013 USP17L5A8MUK1 530 aa24.06■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CYP2E1P05181 493 aaPredicted RBP24.06■■□□□ 1.44
TNFRSF11A-204ENST00000592013 ASNSP08243 561 aa24.06■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CAP2P40123 477 aa24.06■■□□□ 1.44
TNFRSF11A-204ENST00000592013 TTF1Q15361 905 aaPredicted RBP24.06■■□□□ 1.44
TNFRSF11A-204ENST00000592013 ZNF280CQ8ND82 737 aa24.06■■□□□ 1.44
TNFRSF11A-204ENST00000592013 NKX2-3Q8TAU0 364 aa24.06■■□□□ 1.44
TNFRSF11A-204ENST00000592013 DBNLQ9UJU6 430 aaKnown RBP24.06■■□□□ 1.44
TNFRSF11A-204ENST00000592013 POTEFA5A3E0 1075 aa24.05■■□□□ 1.44
TNFRSF11A-204ENST00000592013 BCRP11274 1271 aa24.05■■□□□ 1.44
TNFRSF11A-204ENST00000592013 ZAP70P43403 619 aa24.05■■□□□ 1.44
TNFRSF11A-204ENST00000592013 ARHGAP39Q9C0H5 1083 aa24.05■■□□□ 1.44
TNFRSF11A-204ENST00000592013 MYPNQ86TC9 1320 aa24.05■■□□□ 1.44
TNFRSF11A-204ENST00000592013 IDH1O75874 414 aaKnown RBP24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CYP2C8P10632 490 aa24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CAPN2P17655 700 aa24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 OSBPP22059 807 aa24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 UBXN2AP68543 259 aa24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 AACSQ86V21 672 aa24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CLASRPQ8N2M8 674 aaKnown RBP24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 TGFBRAP1Q8WUH2 860 aa24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CCDC8Q9H0W5 538 aaPredicted RBP24.04■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CYP7A1P22680 504 aa24.03■■□□□ 1.44
TNFRSF11A-204ENST00000592013 GRK4P32298 578 aa24.03■■□□□ 1.44
TNFRSF11A-204ENST00000592013 GCLCP48506 637 aaPredicted RBP24.03■■□□□ 1.44
TNFRSF11A-204ENST00000592013 PANK1Q8TE04 598 aa24.03■■□□□ 1.44
TNFRSF11A-204ENST00000592013 EAF2Q96CJ1 260 aaPredicted RBP24.03■■□□□ 1.44
TNFRSF11A-204ENST00000592013 SPP2Q13103 211 aa24.02■■□□□ 1.44
TNFRSF11A-204ENST00000592013 SLAIN1Q8ND83 568 aa24.02■■□□□ 1.44
TNFRSF11A-204ENST00000592013 KIF1BPQ96EK5 621 aa24.02■■□□□ 1.44
TNFRSF11A-204ENST00000592013 TMOD4Q9NZQ9 345 aa24.02■■□□□ 1.44
TNFRSF11A-204ENST00000592013 HTTP42858 3142 aa24.02■■□□□ 1.44
TNFRSF11A-204ENST00000592013 FLT1P17948 1338 aa24.02■■□□□ 1.44
TNFRSF11A-204ENST00000592013 CAP1Q01518 475 aa24.01■■□□□ 1.43
TNFRSF11A-204ENST00000592013 MAPKAPK5Q8IW41 473 aa24.01■■□□□ 1.43
TNFRSF11A-204ENST00000592013 SH3TC2Q8TF17 1288 aa24.01■■□□□ 1.43
TNFRSF11A-204ENST00000592013 BIN2Q9UBW5 565 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF11A-204ENST00000592013 EXOC6BQ9Y2D4 811 aa24.01■■□□□ 1.43
TNFRSF11A-204ENST00000592013 C19orf81C9J6K1 198 aa24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 TNPO2O14787 897 aaKnown RBP24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 RAB11FIP3O75154 756 aa24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 SLC34A2O95436 690 aa24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 EN2P19622 333 aaPredicted RBP24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 USP5P45974 858 aa24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 COA7Q96BR5 231 aa24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 WDR18Q9BV38 432 aa24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 PIH1D3Q9NQM4 214 aaKnown RBP24■■□□□ 1.43
TNFRSF11A-204ENST00000592013 IFIT2P09913 472 aaKnown RBP23.99■■□□□ 1.43
TNFRSF11A-204ENST00000592013 FAM110CQ1W6H9 321 aa23.99■■□□□ 1.43
TNFRSF11A-204ENST00000592013 TTC6Q86TZ1 520 aa23.99■■□□□ 1.43
TNFRSF11A-204ENST00000592013 METTL16Q86W50 562 aaKnown RBP23.99■■□□□ 1.43
TNFRSF11A-204ENST00000592013 RHPN1Q8TCX5 695 aa23.99■■□□□ 1.43
TNFRSF11A-204ENST00000592013 FAM196BA6NMK8 535 aa23.98■■□□□ 1.43
TNFRSF11A-204ENST00000592013 SH3D19Q5HYK7 790 aa23.98■■□□□ 1.43
TNFRSF11A-204ENST00000592013 MAGEB6Q8N7X4 407 aa23.98■■□□□ 1.43
TNFRSF11A-204ENST00000592013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.98■■□□□ 1.43
TNFRSF11A-204ENST00000592013 TLR7Q9NYK1 1049 aaKnown RBP23.98■■□□□ 1.43
TNFRSF11A-204ENST00000592013 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
TNFRSF11A-204ENST00000592013 PXYLP1Q8TE99 480 aa23.97■■□□□ 1.43
TNFRSF11A-204ENST00000592013 HMGCS2P54868 508 aa23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 IRX3P78415 501 aaPredicted RBP23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 PRKCZQ05513 592 aa23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 IRF5Q13568 498 aa23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 ADGRA1Q86SQ6 560 aa23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 GTF3C2Q8WUA4 911 aaPredicted RBP23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 TAOK2Q9UL54 1235 aa23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 PALD1Q9ULE6 856 aa23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 PTPRFP10586 1907 aa23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 PHIPQ8WWQ0 1821 aa23.96■■□□□ 1.43
TNFRSF11A-204ENST00000592013 ECM2O94769 699 aaPredicted RBP23.95■■□□□ 1.42
TNFRSF11A-204ENST00000592013 BACE1P56817 501 aa23.95■■□□□ 1.42
TNFRSF11A-204ENST00000592013 ANKRD13CQ8N6S4 541 aa23.95■■□□□ 1.42
TNFRSF11A-204ENST00000592013 EHD4Q9H223 541 aa23.95■■□□□ 1.42
TNFRSF11A-204ENST00000592013 ZBTB40Q9NUA8 1239 aa23.95■■□□□ 1.42
TNFRSF11A-204ENST00000592013 SERPINB13Q9UIV8 391 aa23.95■■□□□ 1.42
TNFRSF11A-204ENST00000592013 FOCADQ5VW36 1801 aa23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 ATAD5Q96QE3 1844 aa23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 USP17L10C9JJH3 530 aa23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 ADCY3O60266 1144 aa23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 GJB1P08034 283 aa23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 TREML2Q5T2D2 321 aa23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 IL1RAPL2Q9NP60 686 aa23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 COG6Q9Y2V7 657 aa23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 KIAA0100Q14667 2235 aaKnown RBP23.94■■□□□ 1.42
TNFRSF11A-204ENST00000592013 MYCP01106 439 aaPredicted RBP23.93■■□□□ 1.42
TNFRSF11A-204ENST00000592013 CTGFP29279 349 aa23.93■■□□□ 1.42
TNFRSF11A-204ENST00000592013 FLT3LGP49771 235 aa23.93■■□□□ 1.42
TNFRSF11A-204ENST00000592013 MTMR2Q13614 643 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms