RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CTU1Q7Z7A3 348 aaKnown RBP33.03■■■□□ 2.88
SMAD4-213ENST00000591914 ZCCHC17Q9NP64 241 aaKnown RBP33.03■■■□□ 2.88
SMAD4-213ENST00000591914 BTBD19C9JJ37 291 aa33.02■■■□□ 2.88
SMAD4-213ENST00000591914 CAPN15O75808 1086 aa33.02■■■□□ 2.88
SMAD4-213ENST00000591914 METTL16Q86W50 562 aaKnown RBP33.02■■■□□ 2.88
SMAD4-213ENST00000591914 PALD1Q9ULE6 856 aa33.02■■■□□ 2.88
SMAD4-213ENST00000591914 ZNF532Q9HCE3 1301 aa33.02■■■□□ 2.88
SMAD4-213ENST00000591914 AAMPQ13685 434 aa33.01■■■□□ 2.87
SMAD4-213ENST00000591914 ZHX2Q9Y6X8 837 aa33.01■■■□□ 2.87
SMAD4-213ENST00000591914 MAGEB6P1A0A0J9YX57 407 aa33■■■□□ 2.87
SMAD4-213ENST00000591914 CXCL11O14625 94 aa33■■■□□ 2.87
SMAD4-213ENST00000591914 PHIPQ8WWQ0 1821 aa33■■■□□ 2.87
SMAD4-213ENST00000591914 USP5P45974 858 aa32.99■■■□□ 2.87
SMAD4-213ENST00000591914 MOGSQ13724 837 aa32.99■■■□□ 2.87
SMAD4-213ENST00000591914 TAF1CQ15572 869 aaPredicted RBP32.99■■■□□ 2.87
SMAD4-213ENST00000591914 FOXP4Q8IVH2 680 aaPredicted RBP32.99■■■□□ 2.87
SMAD4-213ENST00000591914 GPATCH3Q96I76 525 aa32.99■■■□□ 2.87
SMAD4-213ENST00000591914 SAP30BPQ9UHR5 308 aaKnown RBP32.99■■■□□ 2.87
SMAD4-213ENST00000591914 AFG3L2Q9Y4W6 797 aa32.99■■■□□ 2.87
SMAD4-213ENST00000591914 MYH1P12882 1939 aa32.98■■■□□ 2.87
SMAD4-213ENST00000591914 ADD2P35612 726 aa32.98■■■□□ 2.87
SMAD4-213ENST00000591914 HDAC1Q13547 482 aaPredicted RBP32.98■■■□□ 2.87
SMAD4-213ENST00000591914 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.98■■■□□ 2.87
SMAD4-213ENST00000591914 DNAJC18Q9H819 358 aa32.98■■■□□ 2.87
SMAD4-213ENST00000591914 CAP2P40123 477 aa32.97■■■□□ 2.87
SMAD4-213ENST00000591914 RRP1BQ14684 758 aaKnown RBP32.97■■■□□ 2.87
SMAD4-213ENST00000591914 ANKRD23Q86SG2 305 aa32.97■■■□□ 2.87
SMAD4-213ENST00000591914 ZFYVE28Q9HCC9 887 aa32.97■■■□□ 2.87
SMAD4-213ENST00000591914 ATAD5Q96QE3 1844 aa32.97■■■□□ 2.87
SMAD4-213ENST00000591914 DDX60LQ5H9U9 1706 aaKnown RBP32.97■■■□□ 2.87
SMAD4-213ENST00000591914 HLA-DOAP06340 250 aa32.96■■■□□ 2.87
SMAD4-213ENST00000591914 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.96■■■□□ 2.87
SMAD4-213ENST00000591914 MYH7P12883 1935 aa32.96■■■□□ 2.87
SMAD4-213ENST00000591914 A0A0G2JLL6 359 aaPredicted RBP32.95■■■□□ 2.87
SMAD4-213ENST00000591914 PRRT2Q7Z6L0 340 aaPredicted RBP32.95■■■□□ 2.87
SMAD4-213ENST00000591914 PTPRFP10586 1907 aa32.94■■■□□ 2.86
SMAD4-213ENST00000591914 TSHZ3Q63HK5 1081 aa32.94■■■□□ 2.86
SMAD4-213ENST00000591914 CRACR2BQ8N4Y2 399 aaPredicted RBP32.94■■■□□ 2.86
SMAD4-213ENST00000591914 CRNKL1Q9BZJ0 848 aaKnown RBP32.94■■■□□ 2.86
SMAD4-213ENST00000591914 UBE3CQ15386 1083 aa32.93■■■□□ 2.86
SMAD4-213ENST00000591914 PKN2Q16513 984 aaKnown RBP32.93■■■□□ 2.86
SMAD4-213ENST00000591914 SLFNL1Q499Z3 407 aa32.93■■■□□ 2.86
SMAD4-213ENST00000591914 LCORLQ8N3X6 602 aa32.93■■■□□ 2.86
SMAD4-213ENST00000591914 SP3Q02447 781 aa32.92■■■□□ 2.86
SMAD4-213ENST00000591914 SLC4A8Q2Y0W8 1093 aa32.92■■■□□ 2.86
SMAD4-213ENST00000591914 CCDC84Q86UT8 332 aaPredicted RBP32.92■■■□□ 2.86
SMAD4-213ENST00000591914 GCC1Q96CN9 775 aa32.92■■■□□ 2.86
SMAD4-213ENST00000591914 TRIM34Q9BYJ4 488 aa32.92■■■□□ 2.86
SMAD4-213ENST00000591914 EHD4Q9H223 541 aa32.92■■■□□ 2.86
SMAD4-213ENST00000591914 TTC41PQ6P2S7 1318 aa32.92■■■□□ 2.86
SMAD4-213ENST00000591914 NAV1Q8NEY1 1877 aa32.91■■■□□ 2.86
SMAD4-213ENST00000591914 PDHXO00330 501 aa32.91■■■□□ 2.86
SMAD4-213ENST00000591914 TLR2O60603 784 aa32.91■■■□□ 2.86
SMAD4-213ENST00000591914 ZSCAN25Q6NSZ9 544 aa32.91■■■□□ 2.86
SMAD4-213ENST00000591914 GPAT2Q6NUI2 795 aa32.91■■■□□ 2.86
SMAD4-213ENST00000591914 FASTKD5Q7L8L6 764 aaKnown RBP32.91■■■□□ 2.86
SMAD4-213ENST00000591914 ERO1AQ96HE7 468 aa32.91■■■□□ 2.86
SMAD4-213ENST00000591914 TBC1D2Q9BYX2 928 aa32.91■■■□□ 2.86
SMAD4-213ENST00000591914 TRIM75PA6NK02 468 aa32.9■■■□□ 2.86
SMAD4-213ENST00000591914 CHGBP05060 677 aa32.9■■■□□ 2.86
SMAD4-213ENST00000591914 TTC6Q86TZ1 520 aa32.9■■■□□ 2.86
SMAD4-213ENST00000591914 OTUD7AQ8TE49 926 aaPredicted RBP32.9■■■□□ 2.86
SMAD4-213ENST00000591914 KBTBD3Q8NAB2 608 aa32.89■■■□□ 2.86
SMAD4-213ENST00000591914 ARMT1Q9H993 441 aa32.89■■■□□ 2.86
SMAD4-213ENST00000591914 SERPINB13Q9UIV8 391 aa32.89■■■□□ 2.86
SMAD4-213ENST00000591914 SUPT16HQ9Y5B9 1047 aaKnown RBP32.89■■■□□ 2.86
SMAD4-213ENST00000591914 USP17L5A8MUK1 530 aa32.88■■■□□ 2.85
SMAD4-213ENST00000591914 MBD4O95243 580 aa32.88■■■□□ 2.85
SMAD4-213ENST00000591914 ASNSP08243 561 aa32.88■■■□□ 2.85
SMAD4-213ENST00000591914 JAG1P78504 1218 aa32.88■■■□□ 2.85
SMAD4-213ENST00000591914 EXOC6Q8TAG9 804 aa32.88■■■□□ 2.85
SMAD4-213ENST00000591914 PI4K2BQ8TCG2 481 aa32.88■■■□□ 2.85
SMAD4-213ENST00000591914 CD99L2Q8TCZ2 262 aa32.88■■■□□ 2.85
SMAD4-213ENST00000591914 GINM1Q9NU53 330 aa32.88■■■□□ 2.85
SMAD4-213ENST00000591914 SALL3Q9BXA9 1300 aa32.87■■■□□ 2.85
SMAD4-213ENST00000591914 ANKRD45Q5TZF3 282 aa32.87■■■□□ 2.85
SMAD4-213ENST00000591914 TATDN1Q6P1N9 297 aa32.87■■■□□ 2.85
SMAD4-213ENST00000591914 ZNF280CQ8ND82 737 aa32.87■■■□□ 2.85
SMAD4-213ENST00000591914 SDR42E1Q8WUS8 393 aa32.87■■■□□ 2.85
SMAD4-213ENST00000591914 DCP1AQ9NPI6 582 aaPredicted RBP32.87■■■□□ 2.85
SMAD4-213ENST00000591914 ERC2O15083 957 aa32.86■■■□□ 2.85
SMAD4-213ENST00000591914 PLCD1P51178 756 aa32.86■■■□□ 2.85
SMAD4-213ENST00000591914 SPP2Q13103 211 aa32.86■■■□□ 2.85
SMAD4-213ENST00000591914 GADL1Q6ZQY3 521 aa32.86■■■□□ 2.85
SMAD4-213ENST00000591914 OTOP1Q7RTM1 612 aa32.86■■■□□ 2.85
SMAD4-213ENST00000591914 SLC45A1Q9Y2W3 748 aa32.86■■■□□ 2.85
SMAD4-213ENST00000591914 ADGRA2Q96PE1 1338 aa32.85■■■□□ 2.85
SMAD4-213ENST00000591914 CCDC85CA6NKD9 419 aa32.85■■■□□ 2.85
SMAD4-213ENST00000591914 MX1P20591 662 aa32.85■■■□□ 2.85
SMAD4-213ENST00000591914 FBXO46Q6PJ61 603 aaPredicted RBP32.85■■■□□ 2.85
SMAD4-213ENST00000591914 MCM9Q9NXL9 1143 aa32.85■■■□□ 2.85
SMAD4-213ENST00000591914 LOC285556D6RIA3 1793 aa32.84■■■□□ 2.85
SMAD4-213ENST00000591914 GLRX3O76003 335 aaKnown RBP32.84■■■□□ 2.85
SMAD4-213ENST00000591914 GDF11O95390 407 aa32.84■■■□□ 2.85
SMAD4-213ENST00000591914 CAP1Q01518 475 aa32.84■■■□□ 2.85
SMAD4-213ENST00000591914 SHROOM1Q2M3G4 852 aaPredicted RBP32.84■■■□□ 2.85
SMAD4-213ENST00000591914 C17orf99Q6UX52 265 aa32.84■■■□□ 2.85
SMAD4-213ENST00000591914 WDR18Q9BV38 432 aa32.84■■■□□ 2.85
SMAD4-213ENST00000591914 AS3MTQ9HBK9 375 aa32.84■■■□□ 2.85
SMAD4-213ENST00000591914 ZBTB47Q9UFB7 747 aaPredicted RBP32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms