RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 LRRC24Q50LG9 513 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 ZSCAN29Q8IWY8 852 aaPredicted RBP12.69□□□□□ -0.38
SDF2-209ENST00000591903 MAFAQ8NHW3 353 aaPredicted RBP12.69□□□□□ -0.38
SDF2-209ENST00000591903 SOCS4Q8WXH5 440 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 TRIB2Q92519 343 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 SUCLG2Q96I99 432 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 FAM161BQ96MY7 647 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 API5Q9BZZ5 524 aaKnown RBP12.69□□□□□ -0.38
SDF2-209ENST00000591903 SRCIN1Q9C0H9 1055 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 LTBP2Q14767 1821 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 LDHBP07195 334 aaKnown RBP12.68□□□□□ -0.38
SDF2-209ENST00000591903 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
SDF2-209ENST00000591903 FGFR2P21802 821 aa12.68□□□□□ -0.38
SDF2-209ENST00000591903 RGS3P49796 1198 aa12.68□□□□□ -0.38
SDF2-209ENST00000591903 TRIM32Q13049 653 aa12.68□□□□□ -0.38
SDF2-209ENST00000591903 RABL6Q3YEC7 729 aaPredicted RBP12.68□□□□□ -0.38
SDF2-209ENST00000591903 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
SDF2-209ENST00000591903 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
SDF2-209ENST00000591903 NUDT12Q9BQG2 462 aa12.68□□□□□ -0.38
SDF2-209ENST00000591903 DNAH12Q6ZR08 3092 aa12.68□□□□□ -0.38
SDF2-209ENST00000591903 UTYO14607 1347 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 SALL1Q9NSC2 1324 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 SLC5A1P13866 664 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 PRDX5P30044 214 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 LRRC26Q2I0M4 334 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 ZFPM1Q8IX07 1006 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 LPIN2Q92539 896 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 CDX2Q99626 313 aaPredicted RBP12.67□□□□□ -0.38
SDF2-209ENST00000591903 MORF4L1Q9UBU8 362 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 PRKAG2Q9UGJ0 569 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 RFX7Q2KHR2 1363 aa12.67□□□□□ -0.38
SDF2-209ENST00000591903 TBC1D12O60347 775 aa12.66□□□□□ -0.38
SDF2-209ENST00000591903 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
SDF2-209ENST00000591903 ZKSCAN2Q63HK3 967 aa12.66□□□□□ -0.38
SDF2-209ENST00000591903 SLC4A10Q6U841 1118 aa12.66□□□□□ -0.38
SDF2-209ENST00000591903 ATF7IPQ6VMQ6 1270 aa12.66□□□□□ -0.38
SDF2-209ENST00000591903 SLF2Q8IX21 1173 aa12.66□□□□□ -0.38
SDF2-209ENST00000591903 ZGPATQ8N5A5 531 aaKnown RBP12.66□□□□□ -0.38
SDF2-209ENST00000591903 OSBPL5Q9H0X9 879 aaPredicted RBP12.66□□□□□ -0.38
SDF2-209ENST00000591903 BICC1Q9H694 974 aaKnown RBP12.66□□□□□ -0.38
SDF2-209ENST00000591903 GNL3LQ9NVN8 582 aaKnown RBP12.66□□□□□ -0.38
SDF2-209ENST00000591903 MUC3AQ02505 3323 aa12.65□□□□□ -0.38
SDF2-209ENST00000591903 SEMA3EO15041 775 aa12.65□□□□□ -0.38
SDF2-209ENST00000591903 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.38
SDF2-209ENST00000591903 NBPF7P0C2Y1 421 aaPredicted RBP12.65□□□□□ -0.38
SDF2-209ENST00000591903 CYP2B6P20813 491 aa12.65□□□□□ -0.38
SDF2-209ENST00000591903 COL9A1P20849 921 aa12.65□□□□□ -0.38
SDF2-209ENST00000591903 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
SDF2-209ENST00000591903 ZNF280CQ8ND82 737 aa12.65□□□□□ -0.38
SDF2-209ENST00000591903 ASCC2Q9H1I8 757 aaPredicted RBP12.65□□□□□ -0.38
SDF2-209ENST00000591903 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.38
SDF2-209ENST00000591903 TTC28Q96AY4 2481 aa12.65□□□□□ -0.38
SDF2-209ENST00000591903 CDH23Q9H251 3354 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 GAKO14976 1311 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 DDTLA6NHG4 134 aaPredicted RBP12.64□□□□□ -0.39
SDF2-209ENST00000591903 ZBTB22O15209 634 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 BCAR3O75815 825 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 MAPK4P31152 587 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 CACNB2Q08289 660 aaPredicted RBP12.64□□□□□ -0.39
SDF2-209ENST00000591903 SPP2Q13103 211 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 LHX8Q68G74 356 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 SH3BP5LQ7L8J4 393 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 DENND2AQ9ULE3 1009 aa12.64□□□□□ -0.39
SDF2-209ENST00000591903 NOB1Q9ULX3 412 aaKnown RBP12.64□□□□□ -0.39
SDF2-209ENST00000591903 RLFQ13129 1914 aa12.63□□□□□ -0.39
SDF2-209ENST00000591903 RGS2P41220 211 aa12.63□□□□□ -0.39
SDF2-209ENST00000591903 HMGCS2P54868 508 aa12.63□□□□□ -0.39
SDF2-209ENST00000591903 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
SDF2-209ENST00000591903 SMAD3P84022 425 aaKnown RBP12.63□□□□□ -0.39
SDF2-209ENST00000591903 ANKRD44Q8N8A2 993 aa12.63□□□□□ -0.39
SDF2-209ENST00000591903 GPRC5AQ8NFJ5 357 aa12.63□□□□□ -0.39
SDF2-209ENST00000591903 AS3MTQ9HBK9 375 aa12.63□□□□□ -0.39
SDF2-209ENST00000591903 TMEM265A0A087WTH1 108 aa12.62□□□□□ -0.39
SDF2-209ENST00000591903 USP17L5A8MUK1 530 aa12.62□□□□□ -0.39
SDF2-209ENST00000591903 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
SDF2-209ENST00000591903 MSCO60682 206 aa12.62□□□□□ -0.39
SDF2-209ENST00000591903 NPM3O75607 178 aaKnown RBP12.62□□□□□ -0.39
SDF2-209ENST00000591903 TRIM27P14373 513 aa12.62□□□□□ -0.39
SDF2-209ENST00000591903 FOSL2P15408 326 aa12.62□□□□□ -0.39
SDF2-209ENST00000591903 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
SDF2-209ENST00000591903 CCDC84Q86UT8 332 aaPredicted RBP12.62□□□□□ -0.39
SDF2-209ENST00000591903 DZIP1Q86YF9 867 aaKnown RBP12.62□□□□□ -0.39
SDF2-209ENST00000591903 CCAR1Q8IX12 1150 aaKnown RBP12.62□□□□□ -0.39
SDF2-209ENST00000591903 GTF3C2Q8WUA4 911 aaPredicted RBP12.62□□□□□ -0.39
SDF2-209ENST00000591903 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
SDF2-209ENST00000591903 APBA2Q99767 749 aa12.62□□□□□ -0.39
SDF2-209ENST00000591903 SENP6Q9GZR1 1112 aaPredicted RBP12.62□□□□□ -0.39
SDF2-209ENST00000591903 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.62□□□□□ -0.39
SDF2-209ENST00000591903 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.62□□□□□ -0.39
SDF2-209ENST00000591903 EYA2O00167 538 aa12.61□□□□□ -0.39
SDF2-209ENST00000591903 MAP4K4O95819 1239 aaPredicted RBP12.61□□□□□ -0.39
SDF2-209ENST00000591903 CCND3P30281 292 aaPredicted RBP12.61□□□□□ -0.39
SDF2-209ENST00000591903 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
SDF2-209ENST00000591903 PICALMQ13492 652 aa12.61□□□□□ -0.39
SDF2-209ENST00000591903 MYLIPQ8WY64 445 aa12.61□□□□□ -0.39
SDF2-209ENST00000591903 USP6NLQ92738 828 aa12.61□□□□□ -0.39
SDF2-209ENST00000591903 CHMP4BQ9H444 224 aaKnown RBP12.61□□□□□ -0.39
SDF2-209ENST00000591903 DDX4Q9NQI0 724 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms