RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 OTUD7BQ6GQQ9 843 aa11.12□□□□□ -0.63
DNMT1-223ENST00000591239 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
DNMT1-223ENST00000591239 PICK1Q9NRD5 415 aa11.12□□□□□ -0.63
DNMT1-223ENST00000591239 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
DNMT1-223ENST00000591239 HERC5Q9UII4 1024 aaKnown RBP11.12□□□□□ -0.63
DNMT1-223ENST00000591239 LAMB1P07942 1786 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 CDK5RAP2Q96SN8 1893 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 CCL15-CCL14A0A0B4J2E2 113 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 ERC2O15083 957 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 GLRX3O76003 335 aaKnown RBP11.11□□□□□ -0.63
DNMT1-223ENST00000591239 IGHDP01880 384 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 CHGBP05060 677 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 CETPP11597 493 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 PTPRAP18433 802 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 MX1P20591 662 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 IRX6P78412 446 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-223ENST00000591239 SNAPC2Q13487 334 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 CCL15Q16663 113 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 METTL16Q86W50 562 aaKnown RBP11.11□□□□□ -0.63
DNMT1-223ENST00000591239 FOXP4Q8IVH2 680 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-223ENST00000591239 SMC5Q8IY18 1101 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 SCYL3Q8IZE3 742 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 PI4K2BQ8TCG2 481 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 BRI3BPQ8WY22 251 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 CFHR5Q9BXR6 569 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
DNMT1-223ENST00000591239 FOCADQ5VW36 1801 aa11.11□□□□□ -0.63
DNMT1-223ENST00000591239 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 HLA-DOAP06340 250 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 UBE3CQ15386 1083 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 SLC4A8Q2Y0W8 1093 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 LCORLQ8N3X6 602 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 CRACR2BQ8N4Y2 399 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-223ENST00000591239 R3HDMLQ9H3Y0 253 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 ARMT1Q9H993 441 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 KCNH4Q9UQ05 1017 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 ZHX2Q9Y6X8 837 aa11.1□□□□□ -0.63
DNMT1-223ENST00000591239 GPR25O00155 361 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 CXCL11O14625 94 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 MBD4O95243 580 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 CAP2P40123 477 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 RRP1BQ14684 758 aaKnown RBP11.09□□□□□ -0.63
DNMT1-223ENST00000591239 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
DNMT1-223ENST00000591239 B4GALNT3Q6L9W6 998 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 LNPKQ9C0E8 428 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 DNAJC18Q9H819 358 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-223ENST00000591239 STAP2Q9UGK3 403 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 AFG3L2Q9Y4W6 797 aa11.09□□□□□ -0.63
DNMT1-223ENST00000591239 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 BTBD19C9JJ37 291 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 POLR3DP05423 398 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-223ENST00000591239 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-223ENST00000591239 PDE1AP54750 535 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 NUCB1Q02818 461 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 CRHR2Q13324 411 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 TTC6Q86TZ1 520 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 CHD1LQ86WJ1 897 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 ZNF296Q8WUU4 475 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-223ENST00000591239 PUS7LQ9H0K6 701 aaKnown RBP11.08□□□□□ -0.64
DNMT1-223ENST00000591239 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-223ENST00000591239 ATP8A2Q9NTI2 1148 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 MCM9Q9NXL9 1143 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
DNMT1-223ENST00000591239 MYH1P12882 1939 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 MYH7P12883 1935 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 DOCK1Q14185 1865 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 RNF113AO15541 343 aaKnown RBP11.07□□□□□ -0.64
DNMT1-223ENST00000591239 PRKAB2O43741 272 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 PLCD1P51178 756 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 MOGSQ13724 837 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 TAF1CQ15572 869 aaPredicted RBP11.07□□□□□ -0.64
DNMT1-223ENST00000591239 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
DNMT1-223ENST00000591239 CCDC84Q86UT8 332 aaPredicted RBP11.07□□□□□ -0.64
DNMT1-223ENST00000591239 APPBP2Q92624 585 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 OSBP2Q969R2 916 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 EHD4Q9H223 541 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 ZCCHC17Q9NP64 241 aaKnown RBP11.07□□□□□ -0.64
DNMT1-223ENST00000591239 HTTP42858 3142 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 CENPFP49454 3210 aa11.07□□□□□ -0.64
DNMT1-223ENST00000591239 A0A0G2JLL6 359 aaPredicted RBP11.06□□□□□ -0.64
DNMT1-223ENST00000591239 TRIM75PA6NK02 468 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 USP17L5A8MUK1 530 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 FKTNO75072 461 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 ASNSP08243 561 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 JAG1P78504 1218 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 TATDN1Q6P1N9 297 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 FASTKD5Q7L8L6 764 aaKnown RBP11.06□□□□□ -0.64
DNMT1-223ENST00000591239 PRRT2Q7Z6L0 340 aaPredicted RBP11.06□□□□□ -0.64
DNMT1-223ENST00000591239 ANKRD23Q86SG2 305 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 ZNF280CQ8ND82 737 aa11.06□□□□□ -0.64
DNMT1-223ENST00000591239 STRBPQ96SI9 672 aaKnown RBP11.06□□□□□ -0.64
DNMT1-223ENST00000591239 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms