RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SLURP2P0DP57 97 aa21.93■■□□□ 1.1
VAT1-208ENST00000590924 EN2P19622 333 aaPredicted RBP21.93■■□□□ 1.1
VAT1-208ENST00000590924 CTGFP29279 349 aa21.93■■□□□ 1.1
VAT1-208ENST00000590924 PSMC4P43686 418 aa21.93■■□□□ 1.1
VAT1-208ENST00000590924 OS9Q13438 667 aaPredicted RBP21.93■■□□□ 1.1
VAT1-208ENST00000590924 OSBPL5Q9H0X9 879 aaPredicted RBP21.93■■□□□ 1.1
VAT1-208ENST00000590924 SLC45A1Q9Y2W3 748 aa21.93■■□□□ 1.1
VAT1-208ENST00000590924 BCRP11274 1271 aa21.92■■□□□ 1.1
VAT1-208ENST00000590924 IRX6P78412 446 aaPredicted RBP21.92■■□□□ 1.1
VAT1-208ENST00000590924 CCDC158Q5M9N0 1113 aa21.92■■□□□ 1.1
VAT1-208ENST00000590924 TTC39AQ5SRH9 613 aa21.92■■□□□ 1.1
VAT1-208ENST00000590924 ERC1Q8IUD2 1116 aa21.92■■□□□ 1.1
VAT1-208ENST00000590924 TRIM47Q96LD4 638 aa21.92■■□□□ 1.1
VAT1-208ENST00000590924 DBNDD2Q9BQY9 259 aa21.92■■□□□ 1.1
VAT1-208ENST00000590924 SRRDQ9UH36 339 aa21.92■■□□□ 1.1
VAT1-208ENST00000590924 RAB11FIP3O75154 756 aa21.91■■□□□ 1.1
VAT1-208ENST00000590924 CYP2C8P10632 490 aa21.91■■□□□ 1.1
VAT1-208ENST00000590924 HOXD10P28358 340 aa21.91■■□□□ 1.1
VAT1-208ENST00000590924 HDAC1Q13547 482 aaPredicted RBP21.91■■□□□ 1.1
VAT1-208ENST00000590924 SH3TC2Q8TF17 1288 aa21.91■■□□□ 1.1
VAT1-208ENST00000590924 ZNF512BQ96KM6 892 aaPredicted RBP21.91■■□□□ 1.1
VAT1-208ENST00000590924 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.91■■□□□ 1.13e-6■□□□□ 9.8
VAT1-208ENST00000590924 IGSF3O75054 1194 aa21.9■■□□□ 1.1
VAT1-208ENST00000590924 OSBPP22059 807 aa21.9■■□□□ 1.1
VAT1-208ENST00000590924 GADL1Q6ZQY3 521 aa21.9■■□□□ 1.1
VAT1-208ENST00000590924 TEX11Q8IYF3 940 aa21.9■■□□□ 1.1
VAT1-208ENST00000590924 NOL10Q9BSC4 688 aaKnown RBP21.9■■□□□ 1.1
VAT1-208ENST00000590924 DCTPP1Q9H773 170 aa21.9■■□□□ 1.1
VAT1-208ENST00000590924 FAM196BA6NMK8 535 aa21.89■■□□□ 1.09
VAT1-208ENST00000590924 ECM2O94769 699 aaPredicted RBP21.89■■□□□ 1.09
VAT1-208ENST00000590924 FMNL1O95466 1100 aaPredicted RBP21.89■■□□□ 1.09
VAT1-208ENST00000590924 NEFLP07196 543 aa21.89■■□□□ 1.09
VAT1-208ENST00000590924 SLC4A8Q2Y0W8 1093 aa21.89■■□□□ 1.09
VAT1-208ENST00000590924 NAA16Q6N069 864 aaPredicted RBP21.89■■□□□ 1.09
VAT1-208ENST00000590924 SNRKQ9NRH2 765 aa21.89■■□□□ 1.09
VAT1-208ENST00000590924 MYPNQ86TC9 1320 aa21.88■■□□□ 1.09
VAT1-208ENST00000590924 TRIM75PA6NK02 468 aa21.88■■□□□ 1.09
VAT1-208ENST00000590924 CYP2E1P05181 493 aaPredicted RBP21.88■■□□□ 1.09
VAT1-208ENST00000590924 PLCG2P16885 1265 aa21.88■■□□□ 1.09
VAT1-208ENST00000590924 SH3RF3Q8TEJ3 882 aaPredicted RBP21.88■■□□□ 1.09
VAT1-208ENST00000590924 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
VAT1-208ENST00000590924 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.88■■□□□ 1.09
VAT1-208ENST00000590924 HERC5Q9UII4 1024 aaKnown RBP21.88■■□□□ 1.09
VAT1-208ENST00000590924 DBNLQ9UJU6 430 aaKnown RBP21.88■■□□□ 1.09
VAT1-208ENST00000590924 EXOC6BQ9Y2D4 811 aa21.88■■□□□ 1.09
VAT1-208ENST00000590924 BAG3O95817 575 aa21.87■■□□□ 1.09
VAT1-208ENST00000590924 FCGRTP55899 365 aa21.87■■□□□ 1.09
VAT1-208ENST00000590924 PPP4CP60510 307 aa21.87■■□□□ 1.09
VAT1-208ENST00000590924 CCDC84Q86UT8 332 aaPredicted RBP21.87■■□□□ 1.09
VAT1-208ENST00000590924 KIF1BPQ96EK5 621 aa21.87■■□□□ 1.09
VAT1-208ENST00000590924 TBC1D2Q9BYX2 928 aa21.87■■□□□ 1.09
VAT1-208ENST00000590924 AATFQ9NY61 560 aaKnown RBP eCLIP21.87■■□□□ 1.09
VAT1-208ENST00000590924 AGTPBP1Q9UPW5 1226 aa21.87■■□□□ 1.09
VAT1-208ENST00000590924 CAP2P40123 477 aa21.86■■□□□ 1.09
VAT1-208ENST00000590924 PROCA1Q8NCQ7 364 aaPredicted RBP21.86■■□□□ 1.09
VAT1-208ENST00000590924 RAET1EQ8TD07 263 aa21.86■■□□□ 1.09
VAT1-208ENST00000590924 DHX36Q9H2U1 1008 aaKnown RBP21.86■■□□□ 1.09
VAT1-208ENST00000590924 MYCP01106 439 aaPredicted RBP21.85■■□□□ 1.09
VAT1-208ENST00000590924 GRK4P32298 578 aa21.85■■□□□ 1.09
VAT1-208ENST00000590924 ZAP70P43403 619 aa21.85■■□□□ 1.09
VAT1-208ENST00000590924 ADGRA1Q86SQ6 560 aa21.85■■□□□ 1.09
VAT1-208ENST00000590924 RHPN1Q8TCX5 695 aa21.85■■□□□ 1.09
VAT1-208ENST00000590924 SMCR8Q8TEV9 937 aaPredicted RBP21.85■■□□□ 1.09
VAT1-208ENST00000590924 GCC1Q96CN9 775 aa21.85■■□□□ 1.09
VAT1-208ENST00000590924 PI4KBQ9UBF8 816 aa21.85■■□□□ 1.09
VAT1-208ENST00000590924 ERICH6BQ5W0A0 696 aa21.84■■□□□ 1.09
VAT1-208ENST00000590924 ZNF280CQ8ND82 737 aa21.84■■□□□ 1.09
VAT1-208ENST00000590924 EAF2Q96CJ1 260 aaPredicted RBP21.84■■□□□ 1.09
VAT1-208ENST00000590924 TLR7Q9NYK1 1049 aaKnown RBP21.84■■□□□ 1.09
VAT1-208ENST00000590924 PNMA3Q9UL41 463 aa21.84■■□□□ 1.09
VAT1-208ENST00000590924 FLT1P17948 1338 aa21.83■■□□□ 1.09
VAT1-208ENST00000590924 PRKCZQ05513 592 aa21.83■■□□□ 1.09
VAT1-208ENST00000590924 SPP2Q13103 211 aa21.83■■□□□ 1.09
VAT1-208ENST00000590924 RRP1BQ14684 758 aaKnown RBP21.83■■□□□ 1.09
VAT1-208ENST00000590924 MTFR1Q15390 333 aa21.83■■□□□ 1.09
VAT1-208ENST00000590924 TGFBRAP1Q8WUH2 860 aa21.83■■□□□ 1.09
VAT1-208ENST00000590924 CCDC8Q9H0W5 538 aaPredicted RBP21.83■■□□□ 1.09
VAT1-208ENST00000590924 PIH1D3Q9NQM4 214 aaKnown RBP21.83■■□□□ 1.09
VAT1-208ENST00000590924 NAV1Q8NEY1 1877 aa21.83■■□□□ 1.08
VAT1-208ENST00000590924 CEP290O15078 2479 aa21.83■■□□□ 1.08
VAT1-208ENST00000590924 DDX60LQ5H9U9 1706 aaKnown RBP21.83■■□□□ 1.08
VAT1-208ENST00000590924 USP17L5A8MUK1 530 aa21.82■■□□□ 1.08
VAT1-208ENST00000590924 TREML2Q5T2D2 321 aa21.82■■□□□ 1.08
VAT1-208ENST00000590924 METTL16Q86W50 562 aaKnown RBP21.82■■□□□ 1.08
VAT1-208ENST00000590924 LRRCC1Q9C099 1032 aa21.82■■□□□ 1.08
VAT1-208ENST00000590924 PLXNB2O15031 1838 aa21.81■■□□□ 1.08
VAT1-208ENST00000590924 MYH8P13535 1937 aa21.81■■□□□ 1.08
VAT1-208ENST00000590924 MAPKAPK5Q8IW41 473 aa21.81■■□□□ 1.08
VAT1-208ENST00000590924 CLASRPQ8N2M8 674 aaKnown RBP21.81■■□□□ 1.08
VAT1-208ENST00000590924 SLAIN1Q8ND83 568 aa21.81■■□□□ 1.08
VAT1-208ENST00000590924 AS3MTQ9HBK9 375 aa21.81■■□□□ 1.08
VAT1-208ENST00000590924 GABRQQ9UN88 632 aa21.81■■□□□ 1.08
VAT1-208ENST00000590924 MYH7P12883 1935 aa21.8■■□□□ 1.08
VAT1-208ENST00000590924 ASNSP08243 561 aa21.8■■□□□ 1.08
VAT1-208ENST00000590924 HMGCS2P54868 508 aa21.8■■□□□ 1.08
VAT1-208ENST00000590924 FAM110CQ1W6H9 321 aa21.8■■□□□ 1.08
VAT1-208ENST00000590924 SH3D19Q5HYK7 790 aa21.8■■□□□ 1.08
VAT1-208ENST00000590924 FOXP4Q8IVH2 680 aaPredicted RBP21.8■■□□□ 1.08
VAT1-208ENST00000590924 SHISA4Q96DD7 197 aa21.8■■□□□ 1.08
VAT1-208ENST00000590924 DNAJC18Q9H819 358 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms