RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ZNF532Q9HCE3 1301 aa14.64□□□□□ -0.07
TPM4-212ENST00000590180 ATRNL1Q5VV63 1379 aa14.63□□□□□ -0.07
TPM4-212ENST00000590180 BTBD19C9JJ37 291 aa14.63□□□□□ -0.07
TPM4-212ENST00000590180 CXCL11O14625 94 aa14.63□□□□□ -0.07
TPM4-212ENST00000590180 HLA-DOAP06340 250 aa14.63□□□□□ -0.07
TPM4-212ENST00000590180 SLC4A8Q2Y0W8 1093 aa14.63□□□□□ -0.07
TPM4-212ENST00000590180 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.63□□□□□ -0.07
TPM4-212ENST00000590180 HERC5Q9UII4 1024 aaKnown RBP14.63□□□□□ -0.07
TPM4-212ENST00000590180 KCNH4Q9UQ05 1017 aa14.63□□□□□ -0.07
TPM4-212ENST00000590180 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
TPM4-212ENST00000590180 ANKRD45Q5TZF3 282 aa14.62□□□□□ -0.07
TPM4-212ENST00000590180 MYO5AQ9Y4I1 1855 aaKnown RBP14.62□□□□□ -0.07
TPM4-212ENST00000590180 POLR3DP05423 398 aaPredicted RBP14.61□□□□□ -0.07
TPM4-212ENST00000590180 CAP2P40123 477 aa14.61□□□□□ -0.07
TPM4-212ENST00000590180 SP3Q02447 781 aa14.61□□□□□ -0.07
TPM4-212ENST00000590180 SLFNL1Q499Z3 407 aa14.61□□□□□ -0.07
TPM4-212ENST00000590180 TSHZ3Q63HK5 1081 aa14.61□□□□□ -0.07
TPM4-212ENST00000590180 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
TPM4-212ENST00000590180 TTC6Q86TZ1 520 aa14.61□□□□□ -0.07
TPM4-212ENST00000590180 CCDC84Q86UT8 332 aaPredicted RBP14.61□□□□□ -0.07
TPM4-212ENST00000590180 RIOK1Q9BRS2 568 aaKnown RBP14.61□□□□□ -0.07
TPM4-212ENST00000590180 CRNKL1Q9BZJ0 848 aaKnown RBP14.61□□□□□ -0.07
TPM4-212ENST00000590180 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.61□□□□□ -0.07
TPM4-212ENST00000590180 AFG3L2Q9Y4W6 797 aa14.61□□□□□ -0.07
TPM4-212ENST00000590180 OTOFQ9HC10 1997 aa14.61□□□□□ -0.07
TPM4-212ENST00000590180 TCRBV5S4A2TA0A5A2 114 aa14.6□□□□□ -0.07
TPM4-212ENST00000590180 TRIM75PA6NK02 468 aa14.6□□□□□ -0.07
TPM4-212ENST00000590180 PDHXO00330 501 aa14.6□□□□□ -0.07
TPM4-212ENST00000590180 ADD2P35612 726 aa14.6□□□□□ -0.07
TPM4-212ENST00000590180 AAMPQ13685 434 aa14.6□□□□□ -0.07
TPM4-212ENST00000590180 RRP1BQ14684 758 aaKnown RBP14.6□□□□□ -0.07
TPM4-212ENST00000590180 PKN2Q16513 984 aaKnown RBP14.6□□□□□ -0.07
TPM4-212ENST00000590180 GADL1Q6ZQY3 521 aa14.6□□□□□ -0.07
TPM4-212ENST00000590180 FASTKD5Q7L8L6 764 aaKnown RBP14.6□□□□□ -0.07
TPM4-212ENST00000590180 ANKRD23Q86SG2 305 aa14.6□□□□□ -0.07
TPM4-212ENST00000590180 ERO1AQ96HE7 468 aa14.6□□□□□ -0.07
TPM4-212ENST00000590180 ZCCHC17Q9NP64 241 aaKnown RBP14.6□□□□□ -0.07
TPM4-212ENST00000590180 SPP2Q13103 211 aa14.59□□□□□ -0.07
TPM4-212ENST00000590180 LCORLQ8N3X6 602 aa14.59□□□□□ -0.07
TPM4-212ENST00000590180 EXOC6Q8TAG9 804 aa14.59□□□□□ -0.07
TPM4-212ENST00000590180 CD99L2Q8TCZ2 262 aa14.59□□□□□ -0.07
TPM4-212ENST00000590180 GCC1Q96CN9 775 aa14.59□□□□□ -0.07
TPM4-212ENST00000590180 RWDD1Q9H446 243 aaPredicted RBP14.59□□□□□ -0.07
TPM4-212ENST00000590180 ARMT1Q9H993 441 aa14.59□□□□□ -0.07
TPM4-212ENST00000590180 MCM9Q9NXL9 1143 aa14.59□□□□□ -0.07
TPM4-212ENST00000590180 TRIM17Q9Y577 477 aa14.59□□□□□ -0.07
TPM4-212ENST00000590180 COL2A1P02458 1487 aaPredicted RBP14.58□□□□□ -0.08
TPM4-212ENST00000590180 USP17L5A8MUK1 530 aa14.58□□□□□ -0.08
TPM4-212ENST00000590180 ERC2O15083 957 aa14.58□□□□□ -0.08
TPM4-212ENST00000590180 TLR2O60603 784 aa14.58□□□□□ -0.08
TPM4-212ENST00000590180 MBD4O95243 580 aa14.58□□□□□ -0.08
TPM4-212ENST00000590180 HDAC1Q13547 482 aaPredicted RBP14.58□□□□□ -0.08
TPM4-212ENST00000590180 UBE3CQ15386 1083 aa14.58□□□□□ -0.08
TPM4-212ENST00000590180 METTL16Q86W50 562 aaKnown RBP14.58□□□□□ -0.08
TPM4-212ENST00000590180 ZNF280CQ8ND82 737 aa14.58□□□□□ -0.08
TPM4-212ENST00000590180 OTUD7AQ8TE49 926 aaPredicted RBP14.58□□□□□ -0.08
TPM4-212ENST00000590180 SDR42E1Q8WUS8 393 aa14.58□□□□□ -0.08
TPM4-212ENST00000590180 AS3MTQ9HBK9 375 aa14.58□□□□□ -0.08
TPM4-212ENST00000590180 A0A0G2JLL6 359 aaPredicted RBP14.57□□□□□ -0.08
TPM4-212ENST00000590180 PRKAB2O43741 272 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
TPM4-212ENST00000590180 GDF11O95390 407 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 CHGBP05060 677 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 ASNSP08243 561 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 MOGSQ13724 837 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 ARHGEF6Q15052 776 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 GPAT2Q6NUI2 795 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 PRRT2Q7Z6L0 340 aaPredicted RBP14.57□□□□□ -0.08
TPM4-212ENST00000590180 DNAJC18Q9H819 358 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 EFCC1Q9HA90 598 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 CPA4Q9UI42 421 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 SERPINB13Q9UIV8 391 aa14.57□□□□□ -0.08
TPM4-212ENST00000590180 PLCD1P51178 756 aa14.56□□□□□ -0.08
TPM4-212ENST00000590180 KIF22Q14807 665 aa14.56□□□□□ -0.08
TPM4-212ENST00000590180 B4GALNT3Q6L9W6 998 aa14.56□□□□□ -0.08
TPM4-212ENST00000590180 FBXO46Q6PJ61 603 aaPredicted RBP14.56□□□□□ -0.08
TPM4-212ENST00000590180 KBTBD3Q8NAB2 608 aa14.56□□□□□ -0.08
TPM4-212ENST00000590180 TBC1D2Q9BYX2 928 aa14.56□□□□□ -0.08
TPM4-212ENST00000590180 SLC4A4Q9Y6R1 1079 aa14.56□□□□□ -0.08
TPM4-212ENST00000590180 DOCK2Q92608 1830 aa14.56□□□□□ -0.08
TPM4-212ENST00000590180 TTC41PQ6P2S7 1318 aa14.56□□□□□ -0.08
TPM4-212ENST00000590180 MAST2Q6P0Q8 1798 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
TPM4-212ENST00000590180 GLRX3O76003 335 aaKnown RBP14.55□□□□□ -0.08
TPM4-212ENST00000590180 CYP2C8P10632 490 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 MX1P20591 662 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 JAG1P78504 1218 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 CERKLQ49MI3 558 aaPredicted RBP14.55□□□□□ -0.08
TPM4-212ENST00000590180 OTOP1Q7RTM1 612 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 DDRGK1Q96HY6 314 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 PARK7Q99497 189 aaKnown RBP14.55□□□□□ -0.08
TPM4-212ENST00000590180 PUS7LQ9H0K6 701 aaKnown RBP14.55□□□□□ -0.08
TPM4-212ENST00000590180 EHD4Q9H223 541 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 DCP1AQ9NPI6 582 aaPredicted RBP14.55□□□□□ -0.08
TPM4-212ENST00000590180 ATP8A2Q9NTI2 1148 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 GINM1Q9NU53 330 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 HPS5Q9UPZ3 1129 aa14.55□□□□□ -0.08
TPM4-212ENST00000590180 GH2P01242 217 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 CYP2D6P10635 497 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 HMGCS2P54868 508 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms