RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 HHIPL1Q96JK4 782 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 TTF2Q9UNY4 1162 aaKnown RBP12.06□□□□□ -0.48
APOC1-205ENST00000589781 LIMCH1Q9UPQ0 1083 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 NEDD4P46934 1319 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 ECM29Q5VYK3 1845 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
APOC1-205ENST00000589781 ZNF213O14771 459 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 GNAT2P19087 354 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 CRKP46108 304 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 MMP14P50281 582 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 HUNKP57058 714 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 CTDSPL2Q05D32 466 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 ALX1Q15699 326 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 Q6ZUG5 572 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 TDRD3Q9H7E2 651 aaKnown RBP12.05□□□□□ -0.48
APOC1-205ENST00000589781 AATFQ9NY61 560 aaKnown RBP eCLIP12.05□□□□□ -0.48
APOC1-205ENST00000589781 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
APOC1-205ENST00000589781 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
APOC1-205ENST00000589781 UBE2Q2LH0YL09 131 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 GRM1Q13255 1194 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 ME3Q16798 604 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 SPDYE2Q495Y8 402 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 APOBEC3HQ6NTF7 200 aaKnown RBP12.04□□□□□ -0.48
APOC1-205ENST00000589781 CHST3Q7LGC8 479 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 MB21D2Q8IYB1 491 aaPredicted RBP12.04□□□□□ -0.48
APOC1-205ENST00000589781 TEPSINQ96N21 525 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 ALDH8A1Q9H2A2 487 aaPredicted RBP12.04□□□□□ -0.48
APOC1-205ENST00000589781 ZNF70Q9UC06 446 aaPredicted RBP12.04□□□□□ -0.48
APOC1-205ENST00000589781 SERPINA10Q9UK55 444 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 HDAC9Q9UKV0 1011 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 TACC3Q9Y6A5 838 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 MROH7-TTC4A0A0A0MT08 1334 aa12.04□□□□□ -0.48
APOC1-205ENST00000589781 MYH1P12882 1939 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 DTNBO60941 627 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 HMGB1P09429 215 aaKnown RBP12.03□□□□□ -0.48
APOC1-205ENST00000589781 CACNB3P54284 484 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 ANTXR2P58335 489 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 EXOSC10Q01780 885 aaKnown RBP12.03□□□□□ -0.48
APOC1-205ENST00000589781 ANKRD1Q15327 319 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 DHX32Q7L7V1 743 aaKnown RBP12.03□□□□□ -0.48
APOC1-205ENST00000589781 RALYLQ86SE5 291 aaKnown RBP12.03□□□□□ -0.48
APOC1-205ENST00000589781 NECAB1Q8N987 351 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 BRF1Q92994 677 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
APOC1-205ENST00000589781 NACAP1Q9BZK3 213 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 DEFB129Q9H1M3 183 aa12.03□□□□□ -0.48
APOC1-205ENST00000589781 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
APOC1-205ENST00000589781 CYP2D7A0A087X1C5 515 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 PRC1O43663 620 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 HSPA8P11142 646 aaKnown RBP12.02□□□□□ -0.49
APOC1-205ENST00000589781 GSTO1P78417 241 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 FGD1P98174 961 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 STK3Q13188 491 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 RAB3GAP1Q15042 981 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 NFKBIBQ15653 356 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 LDLRAD1Q5T700 205 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 NBPF12Q5TAG4 269 aaPredicted RBP12.02□□□□□ -0.49
APOC1-205ENST00000589781 RGMBQ6NW40 437 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 RASAL3Q86YV0 1011 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 STK11IPQ8N1F8 1099 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 C2orf69Q8N8R5 385 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 NCOA7Q8NI08 942 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 TBC1D22AQ8WUA7 517 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.49
APOC1-205ENST00000589781 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 MRIQ9BWK5 157 aa12.02□□□□□ -0.49
APOC1-205ENST00000589781 CRNKL1Q9BZJ0 848 aaKnown RBP12.02□□□□□ -0.49
APOC1-205ENST00000589781 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
APOC1-205ENST00000589781 PAPPA2Q9BXP8 1791 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 B4E1Z4 1266 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 SMIM22K7EJ46 135 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 SLC10A3P09131 477 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 BTDP43251 543 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 HDLBPQ00341 1268 aaKnown RBP12.01□□□□□ -0.49
APOC1-205ENST00000589781 PPARAQ07869 468 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 APOBRQ0VD83 1088 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 PKP1Q13835 747 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 PRKG1Q13976 671 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 RASA3Q14644 834 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
APOC1-205ENST00000589781 CYB5R4Q7L1T6 521 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 APOBEC3FQ8IUX4 373 aaKnown RBP12.01□□□□□ -0.49
APOC1-205ENST00000589781 SH3RF3Q8TEJ3 882 aaPredicted RBP12.01□□□□□ -0.49
APOC1-205ENST00000589781 ZDHHC15Q96MV8 337 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 NOL10Q9BSC4 688 aaKnown RBP12.01□□□□□ -0.49
APOC1-205ENST00000589781 CWC22Q9HCG8 908 aaKnown RBP12.01□□□□□ -0.49
APOC1-205ENST00000589781 INCENPQ9NQS7 918 aa12.01□□□□□ -0.49
APOC1-205ENST00000589781 IGSF3O75054 1194 aa12□□□□□ -0.49
APOC1-205ENST00000589781 USP2O75604 605 aaPredicted RBP12□□□□□ -0.49
APOC1-205ENST00000589781 CYP2D6P10635 497 aa12□□□□□ -0.49
APOC1-205ENST00000589781 MAP2K2P36507 400 aa12□□□□□ -0.49
APOC1-205ENST00000589781 ECE1P42892 770 aa12□□□□□ -0.49
APOC1-205ENST00000589781 RBM5P52756 815 aaKnown RBP eCLIP12□□□□□ -0.49
APOC1-205ENST00000589781 KIF23Q02241 960 aaPredicted RBP12□□□□□ -0.49
APOC1-205ENST00000589781 EVX2Q03828 476 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms