RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ROBO3Q96MS0 1386 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 SMIM22K7EJ46 135 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 SLC27A2O14975 620 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 CYP21A2P08686 494 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 HSPA4P34932 840 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 CTDSPL2Q05D32 466 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 SUPT20HL1Q3ZLR7 823 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 DLK2Q6UY11 383 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
ATG4D-211ENST00000589753 CDCA5Q96FF9 252 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 DYNLL2Q96FJ2 89 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 TRIM34Q9BYJ4 488 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
ATG4D-211ENST00000589753 SIPA1L1O43166 1804 aa18.03■□□□□ 0.48
ATG4D-211ENST00000589753 METTL16Q86W50 562 aaKnown RBP18.03■□□□□ 0.48
ATG4D-211ENST00000589753 STK11IPQ8N1F8 1099 aa18.03■□□□□ 0.48
ATG4D-211ENST00000589753 HERC5Q9UII4 1024 aaKnown RBP18.03■□□□□ 0.48
ATG4D-211ENST00000589753 TAOK2Q9UL54 1235 aa18.03■□□□□ 0.48
ATG4D-211ENST00000589753 TBC1D12O60347 775 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 TOMM70O94826 608 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 ZKSCAN1P17029 563 aaPredicted RBP18.02■□□□□ 0.48
ATG4D-211ENST00000589753 NF2P35240 595 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 GABPAQ06546 454 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 PDE4BQ07343 736 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 DCAF15Q66K64 600 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 C16orf86Q6ZW13 317 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 MIGA2Q7L4E1 593 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 TBC1D10CQ8IV04 446 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 SMC1BQ8NDV3 1235 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 NBPF3Q9H094 633 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 RNF41Q9H4P4 317 aaPredicted RBP18.02■□□□□ 0.48
ATG4D-211ENST00000589753 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.02■□□□□ 0.48
ATG4D-211ENST00000589753 SWAP70Q9UH65 585 aa18.02■□□□□ 0.48
ATG4D-211ENST00000589753 SSC5DA1L4H1 1573 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 FAM196BA6NMK8 535 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 TRAF5O00463 557 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 SLURP2P0DP57 97 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 CDK8P49336 464 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 MAP3K10Q02779 954 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 AKNAD1Q5T1N1 836 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 MFSD6Q6ZSS7 791 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 RBM46Q8TBY0 533 aaKnown RBP18.01■□□□□ 0.47
ATG4D-211ENST00000589753 STAG1Q8WVM7 1258 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 KCNB2Q92953 911 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 DNAJC18Q9H819 358 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 ZNF287Q9HBT7 754 aa18.01■□□□□ 0.47
ATG4D-211ENST00000589753 ITGBL1O95965 494 aaPredicted RBP18■□□□□ 0.47
ATG4D-211ENST00000589753 PCP11498 1178 aaKnown RBP18■□□□□ 0.47
ATG4D-211ENST00000589753 RASEFQ8IZ41 740 aa18■□□□□ 0.47
ATG4D-211ENST00000589753 SLC44A5Q8NCS7 719 aa18■□□□□ 0.47
ATG4D-211ENST00000589753 C22orf23Q9BZE7 217 aa18■□□□□ 0.47
ATG4D-211ENST00000589753 MKNK2Q9HBH9 465 aa18■□□□□ 0.47
ATG4D-211ENST00000589753 TAF6LQ9Y6J9 622 aa18■□□□□ 0.47
ATG4D-211ENST00000589753 E7EWF7 191 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 FGRP09769 529 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 SHMT1P34896 483 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 TSGA10IPQ3SY00 556 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 ZNF341Q9BYN7 854 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 INCENPQ9NQS7 918 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 TOMM22Q9NS69 142 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.99■□□□□ 0.47
ATG4D-211ENST00000589753 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 TACC3Q9Y6A5 838 aa17.99■□□□□ 0.47
ATG4D-211ENST00000589753 ORC4O43929 436 aa17.98■□□□□ 0.47
ATG4D-211ENST00000589753 PPP1R12BO60237 982 aaPredicted RBP17.98■□□□□ 0.47
ATG4D-211ENST00000589753 PRDM1O75626 825 aa17.98■□□□□ 0.47
ATG4D-211ENST00000589753 FMR1Q06787 632 aaKnown RBP eCLIP17.98■□□□□ 0.47
ATG4D-211ENST00000589753 KRT32Q14532 448 aa17.98■□□□□ 0.47
ATG4D-211ENST00000589753 TATDN1Q6P1N9 297 aa17.98■□□□□ 0.47
ATG4D-211ENST00000589753 STOX1Q6ZVD7 989 aa17.98■□□□□ 0.47
ATG4D-211ENST00000589753 CNNM2Q9H8M5 875 aa17.98■□□□□ 0.47
ATG4D-211ENST00000589753 ZNF408Q9H9D4 720 aa17.98■□□□□ 0.47
ATG4D-211ENST00000589753 NEDD4P46934 1319 aa17.98■□□□□ 0.47
ATG4D-211ENST00000589753 RASA1P20936 1047 aa17.97■□□□□ 0.47
ATG4D-211ENST00000589753 ANAPC15P60006 121 aa17.97■□□□□ 0.47
ATG4D-211ENST00000589753 TRDNQ13061 729 aa17.97■□□□□ 0.47
ATG4D-211ENST00000589753 PRKG1Q13976 671 aa17.97■□□□□ 0.47
ATG4D-211ENST00000589753 RRP12Q5JTH9 1297 aaKnown RBP17.97■□□□□ 0.47
ATG4D-211ENST00000589753 ZNF444Q8N0Y2 327 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-211ENST00000589753 KRT23Q9C075 422 aa17.97■□□□□ 0.47
ATG4D-211ENST00000589753 FZD1Q9UP38 647 aa17.97■□□□□ 0.47
ATG4D-211ENST00000589753 USP2O75604 605 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-211ENST00000589753 CELF2O95319 508 aaKnown RBP17.96■□□□□ 0.47
ATG4D-211ENST00000589753 RBM25P49756 843 aaKnown RBP17.96■□□□□ 0.47
ATG4D-211ENST00000589753 FSTL1Q12841 308 aa17.96■□□□□ 0.47
ATG4D-211ENST00000589753 TTLL12Q14166 644 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-211ENST00000589753 CERKLQ49MI3 558 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-211ENST00000589753 RALYLQ86SE5 291 aaKnown RBP17.96■□□□□ 0.47
ATG4D-211ENST00000589753 NCOA7Q8NI08 942 aa17.96■□□□□ 0.47
ATG4D-211ENST00000589753 PASKQ96RG2 1323 aa17.96■□□□□ 0.46
ATG4D-211ENST00000589753 PHF20L1A8MW92 1017 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 B4E1Z4 1266 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 RANBP6O60518 1105 aaKnown RBP17.95■□□□□ 0.46
ATG4D-211ENST00000589753 IREB2P48200 963 aaKnown RBP17.95■□□□□ 0.46
ATG4D-211ENST00000589753 NT5C2P49902 561 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 ADCK5Q3MIX3 580 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 ARMC9Q7Z3E5 817 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 ESR2Q92731 530 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 KLRG1Q96E93 195 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 CCDC17Q96LX7 622 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms