RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 GABPAQ06546 454 aa14.47□□□□□ -0.09
DNMT1-218ENST00000589294 PPARAQ07869 468 aa14.47□□□□□ -0.09
DNMT1-218ENST00000589294 NECTIN1Q15223 517 aa14.47□□□□□ -0.09
DNMT1-218ENST00000589294 DLK2Q6UY11 383 aa14.47□□□□□ -0.09
DNMT1-218ENST00000589294 CDAN1Q8IWY9 1227 aa14.47□□□□□ -0.09
DNMT1-218ENST00000589294 CRACR2BQ8N4Y2 399 aaPredicted RBP14.47□□□□□ -0.09
DNMT1-218ENST00000589294 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
DNMT1-218ENST00000589294 CDK5RAP2Q96SN8 1893 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 PASKQ96RG2 1323 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 CYP2D7A0A087X1C5 515 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 UNCXA6NJT0 531 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 FGRP09769 529 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 NT5C2P49902 561 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 FKBP1BP68106 108 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 PDE4BQ07343 736 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 RNF20Q5VTR2 975 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 TATDN1Q6P1N9 297 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 C16orf86Q6ZW13 317 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 ZNF341Q9BYN7 854 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 BACH2Q9BYV9 841 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.46□□□□□ -0.09
DNMT1-218ENST00000589294 ZNF112Q9UJU3 913 aa14.46□□□□□ -0.09
DNMT1-218ENST00000589294 USP2O75604 605 aaPredicted RBP14.45□□□□□ -0.1
DNMT1-218ENST00000589294 SEC24BO95487 1268 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 CDK8P49336 464 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 MAP3K11Q16584 847 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 TSGA10IPQ3SY00 556 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 MIGA2Q7L4E1 593 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 KCNB2Q92953 911 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 RNF41Q9H4P4 317 aaPredicted RBP14.45□□□□□ -0.1
DNMT1-218ENST00000589294 MKNK2Q9HBH9 465 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 ROBO3Q96MS0 1386 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 MYH1P12882 1939 aa14.45□□□□□ -0.1
DNMT1-218ENST00000589294 PHF20L1A8MW92 1017 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 CELF2O95319 508 aaKnown RBP14.44□□□□□ -0.1
DNMT1-218ENST00000589294 CYP21A2P08686 494 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 ZKSCAN1P17029 563 aaPredicted RBP14.44□□□□□ -0.1
DNMT1-218ENST00000589294 MCCP23508 829 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 HSPA4P34932 840 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 HAND2P61296 217 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 SLC4A8Q2Y0W8 1093 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 AKNAD1Q5T1N1 836 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 CST9Q5W186 159 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 CREB3L3Q68CJ9 461 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 MFSD6Q6ZSS7 791 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 ARMC9Q7Z3E5 817 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 C2orf69Q8N8R5 385 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 STAG1Q8WVM7 1258 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 DYNLL2Q96FJ2 89 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 CCDC17Q96LX7 622 aa14.44□□□□□ -0.1
DNMT1-218ENST00000589294 SLC27A2O14975 620 aa14.43□□□□□ -0.1
DNMT1-218ENST00000589294 ORC4O43929 436 aa14.43□□□□□ -0.1
DNMT1-218ENST00000589294 CTNND1O60716 968 aaKnown RBP14.43□□□□□ -0.1
DNMT1-218ENST00000589294 SHMT1P34896 483 aa14.43□□□□□ -0.1
DNMT1-218ENST00000589294 IREB2P48200 963 aaKnown RBP14.43□□□□□ -0.1
DNMT1-218ENST00000589294 EVX2Q03828 476 aa14.43□□□□□ -0.1
DNMT1-218ENST00000589294 CTDSPL2Q05D32 466 aa14.43□□□□□ -0.1
DNMT1-218ENST00000589294 FMR1Q06787 632 aaKnown RBP eCLIP14.43□□□□□ -0.15e-17■■■■■ 59.7
DNMT1-218ENST00000589294 CERKLQ49MI3 558 aaPredicted RBP14.43□□□□□ -0.1
DNMT1-218ENST00000589294 ZNF444Q8N0Y2 327 aaPredicted RBP14.43□□□□□ -0.1
DNMT1-218ENST00000589294 KLRG1Q96E93 195 aa14.43□□□□□ -0.1
DNMT1-218ENST00000589294 DNAJC18Q9H819 358 aa14.43□□□□□ -0.1
DNMT1-218ENST00000589294 GINM1Q9NU53 330 aa14.43□□□□□ -0.1
DNMT1-218ENST00000589294 BAZ2AQ9UIF9 1905 aaKnown RBP14.43□□□□□ -0.1
DNMT1-218ENST00000589294 NAV1Q8NEY1 1877 aa14.42□□□□□ -0.1
DNMT1-218ENST00000589294 SMIM22K7EJ46 135 aa14.42□□□□□ -0.1
DNMT1-218ENST00000589294 MAP3K9P80192 1104 aa14.42□□□□□ -0.1
DNMT1-218ENST00000589294 TTLL12Q14166 644 aaPredicted RBP14.42□□□□□ -0.1
DNMT1-218ENST00000589294 KRT32Q14532 448 aa14.42□□□□□ -0.1
DNMT1-218ENST00000589294 LDLRAD1Q5T700 205 aa14.42□□□□□ -0.1
DNMT1-218ENST00000589294 NBPF3Q9H094 633 aa14.42□□□□□ -0.1
DNMT1-218ENST00000589294 CNNM2Q9H8M5 875 aa14.42□□□□□ -0.1
DNMT1-218ENST00000589294 ZNF408Q9H9D4 720 aa14.42□□□□□ -0.1
DNMT1-218ENST00000589294 UPF2Q9HAU5 1272 aaKnown RBP14.42□□□□□ -0.1
DNMT1-218ENST00000589294 GBA2Q9HCG7 927 aaPredicted RBP14.42□□□□□ -0.1
DNMT1-218ENST00000589294 ANGEL1Q9UNK9 670 aaKnown RBP14.42□□□□□ -0.1
DNMT1-218ENST00000589294 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.42□□□□□ -0.1
DNMT1-218ENST00000589294 DDX60LQ5H9U9 1706 aaKnown RBP14.41□□□□□ -0.1
DNMT1-218ENST00000589294 FAM196BA6NMK8 535 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 E7EWF7 191 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 CAP2P40123 477 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 TRDNQ13061 729 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 PRKG1Q13976 671 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 ANKRD13AQ8IZ07 590 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 SLC44A5Q8NCS7 719 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.41□□□□□ -0.1
DNMT1-218ENST00000589294 KRT23Q9C075 422 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 SSC5DA1L4H1 1573 aa14.41□□□□□ -0.1
DNMT1-218ENST00000589294 TMEM88BA6NKF7 163 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 SLURP2P0DP57 97 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 RASA1P20936 1047 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 ANAPC15P60006 121 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 TBC1D10CQ8IV04 446 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 STK11IPQ8N1F8 1099 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 ESR2Q92731 530 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 WRNIP1Q96S55 665 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 CABP5Q9NP86 173 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 INCENPQ9NQS7 918 aa14.4□□□□□ -0.1
DNMT1-218ENST00000589294 UBE2Q2LH0YL09 131 aa14.39□□□□□ -0.11
DNMT1-218ENST00000589294 PRDM1O75626 825 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms