RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-208	ENST00000589216	SLC9C2	Q5TAH2	1124 aa		11.99	□□□□□ -0.49
PTPN2-208	ENST00000589216	ERO1B	Q86YB8	467 aa		11.99	□□□□□ -0.49
PTPN2-208	ENST00000589216	REM2	Q8IYK8	340 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN2-208	ENST00000589216	LCORL	Q8N3X6	602 aa		11.99	□□□□□ -0.49
PTPN2-208	ENST00000589216	PALD1	Q9ULE6	856 aa		11.99	□□□□□ -0.49
PTPN2-208	ENST00000589216	CCL15-CCL14	A0A0B4J2E2	113 aa		11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	TESPA1	A2RU30	521 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	PLCG2	P16885	1265 aa		11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	ADD2	P35612	726 aa		11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	HDAC1	Q13547	482 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	CCL15	Q16663	113 aa		11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	SCYL3	Q8IZE3	742 aa		11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	FAM43A	Q8N2R8	423 aa		11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	PI4K2B	Q8TCG2	481 aa		11.98	□□□□□ -0.49
PTPN2-208	ENST00000589216	IGSF3	O75054	1194 aa		11.97	□□□□□ -0.49
PTPN2-208	ENST00000589216	JAG1	P78504	1218 aa		11.97	□□□□□ -0.49
PTPN2-208	ENST00000589216	CRHR2	Q13324	411 aa		11.97	□□□□□ -0.49
PTPN2-208	ENST00000589216	MOGS	Q13724	837 aa		11.97	□□□□□ -0.49
PTPN2-208	ENST00000589216	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN2-208	ENST00000589216	CFHR5	Q9BXR6	569 aa		11.97	□□□□□ -0.49
PTPN2-208	ENST00000589216	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
PTPN2-208	ENST00000589216	KCNH4	Q9UQ05	1017 aa		11.97	□□□□□ -0.49
PTPN2-208	ENST00000589216	MAGEB6P1	A0A0J9YX57	407 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	MBD4	O95243	580 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	IGHD	P01880	384 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	PTPRA	P18433	802 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	GTF2A2	P52657	109 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	CAP1	Q01518	475 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	PPAT	Q06203	517 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	IFFO2	Q5TF58	517 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	SDR42E1	Q8WUS8	393 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	ARMT1	Q9H993	441 aa		11.96	□□□□□ -0.49
PTPN2-208	ENST00000589216	BTBD19	C9JJ37	291 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	SMIM22	K7EJ46	135 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	GPR25	O00155	361 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	PRKAB2	O43741	272 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	TBC1D12	O60347	775 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	CTNND1	O60716	968 aa	Known RBP	11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	CAPN15	O75808	1086 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	CYP2D6	P10635	497 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	MX1	P20591	662 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	USP5	P45974	858 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	SNAPC2	Q13487	334 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	ANKRD45	Q5TZF3	282 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	MCOLN1	Q9GZU1	580 aa		11.95	□□□□□ -0.5
PTPN2-208	ENST00000589216	TTC41P	Q6P2S7	1318 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	GDF11	O95390	407 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	ALDH1A1	P00352	501 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	CETP	P11597	493 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	INHBE	P58166	350 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	DGKZ	Q13574	1117 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	TAF1C	Q15572	869 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	TMED8	Q6PL24	325 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	METTL16	Q86W50	562 aa	Known RBP	11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	SMC5	Q8IY18	1101 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	KBTBD3	Q8NAB2	608 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	GPATCH3	Q96I76	525 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	PUS7L	Q9H0K6	701 aa	Known RBP	11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	DHX36	Q9H2U1	1008 aa	Known RBP	11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	PICK1	Q9NRD5	415 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	PI4KB	Q9UBF8	816 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	HERC5	Q9UII4	1024 aa	Known RBP	11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	AFG3L2	Q9Y4W6	797 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	ZHX2	Q9Y6X8	837 aa		11.94	□□□□□ -0.5
PTPN2-208	ENST00000589216	ADGRA2	Q96PE1	1338 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	CYP2D7	A0A087X1C5	515 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216		A0A0G2JLL6	359 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	TRIM75P	A6NK02	468 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	CAP2	P40123	477 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	PLCD1	P51178	756 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	UBE3C	Q15386	1083 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	NOM1	Q5C9Z4	860 aa	Known RBP	11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	CERS3	Q8IU89	383 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	GCC1	Q96CN9	775 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	ABHD8	Q96I13	439 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	LNPK	Q9C0E8	428 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	GREB1L	Q9C091	1923 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216	MGAM	O43451	1857 aa		11.93	□□□□□ -0.5
PTPN2-208	ENST00000589216		M0R2C6	588 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	HLA-DOA	P06340	250 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	AAMP	Q13685	434 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	B4GALNT3	Q6L9W6	998 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	GPAT2	Q6NUI2	795 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	SLC44A5	Q8NCS7	719 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	OSBP2	Q969R2	916 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	EHD4	Q9H223	541 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	ZBTB21	Q9ULJ3	1066 aa		11.92	□□□□□ -0.5
PTPN2-208	ENST00000589216	PDHX	O00330	501 aa		11.91	□□□□□ -0.5
PTPN2-208	ENST00000589216	FKTN	O75072	461 aa		11.91	□□□□□ -0.5
PTPN2-208	ENST00000589216	GLRX3	O76003	335 aa	Known RBP	11.91	□□□□□ -0.5
PTPN2-208	ENST00000589216	SHMT1	P34896	483 aa		11.91	□□□□□ -0.5
PTPN2-208	ENST00000589216	PDE1A	P54750	535 aa		11.91	□□□□□ -0.5
PTPN2-208	ENST00000589216	GABPA	Q06546	454 aa		11.91	□□□□□ -0.5
PTPN2-208	ENST00000589216	TATDN1	Q6P1N9	297 aa		11.91	□□□□□ -0.5
PTPN2-208	ENST00000589216	GADL1	Q6ZQY3	521 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms