RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 PATL2C9JE40 543 aaKnown RBP8.58□□□□□ -1.04
ZNF540-206ENST00000589117 NEMFO60524 1076 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 GJA5P36382 358 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 METAP2P50579 478 aaKnown RBP eCLIP8.58□□□□□ -1.04
ZNF540-206ENST00000589117 TPM4P67936 248 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 DHX8Q14562 1220 aaKnown RBP8.58□□□□□ -1.04
ZNF540-206ENST00000589117 NFXL1Q6ZNB6 911 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 CEP57L1Q8IYX8 460 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 TMTC2Q8N394 836 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 FSIP1Q8NA03 581 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 SPATA5Q8NB90 893 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 SPC24Q8NBT2 197 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 WASF1Q92558 559 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 KRT23Q9C075 422 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 NAPBQ9H115 298 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 SPTLC3Q9NUV7 552 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 ZNF652Q9Y2D9 606 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 ABCA3Q99758 1704 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 ZMYM6O95789 1325 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 ZNF532Q9HCE3 1301 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 UQCRHLA0A096LP55 91 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 UNCXA6NJT0 531 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 ATRNO75882 1429 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 UQCRHP07919 91 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 FDX1P10109 184 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 PDE6AP16499 860 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 DNAJB2P25686 324 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 GUCY1B3Q02153 619 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 SYNE4Q8N205 404 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 ZNF830Q96NB3 372 aaPredicted RBP8.58□□□□□ -1.04
ZNF540-206ENST00000589117 SHANK3Q9BYB0 1731 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 DNAJC25Q9H1X3 360 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 PDCL3Q9H2J4 239 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 CCDC87Q9NVE4 849 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 LRP6O75581 1613 aa8.58□□□□□ -1.04
ZNF540-206ENST00000589117 DISP2A7MBM2 1401 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 RIC1Q4ADV7 1423 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 ERICH2A1L162 156 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 SPTLC2O15270 562 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 ZBTB43O43298 467 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 GABBR2O75899 941 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 FDPSP14324 419 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 CDC25BP30305 580 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 DDB1Q16531 1140 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 PRPF38BQ5VTL8 546 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 SND1Q7KZF4 910 aaKnown RBP eCLIP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 LINC00301Q8NCQ3 95 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 MTA3Q9BTC8 594 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 NHSL1Q5SYE7 1610 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 COL14A1Q05707 1796 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 A0A0G2JLW4 131 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 CCDC196A0A1B0GTZ2 297 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 CCDC69A6NI79 296 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 POLR3DP05423 398 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 IARSP41252 1262 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 LIFRP42702 1097 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 PHKA1P46020 1223 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 ZNF75DP51815 510 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 EIF5P55010 431 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 SARM1Q6SZW1 724 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 PI16Q6UXB8 463 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 PLA2G4DQ86XP0 818 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 KIAA1524Q8TCG1 905 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 TATDN2Q93075 761 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 STRBPQ96SI9 672 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 CDC5LQ99459 802 aaKnown RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 RNF41Q9H4P4 317 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-206ENST00000589117 VRTNQ9H8Y1 702 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 CLIP2Q9UDT6 1046 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 PCDHA7Q9UN72 937 aa8.57□□□□□ -1.04
ZNF540-206ENST00000589117 TOGARAM1Q9Y4F4 1720 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 A0A0G2JS52 829 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 FOXP2O15409 715 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 FGFR2P21802 821 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 SAFBQ15424 915 aaKnown RBP eCLIP8.56□□□□□ -1.04
ZNF540-206ENST00000589117 PROX2Q3B8N5 592 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 TMEM67Q5HYA8 995 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 MFSD6Q6ZSS7 791 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 MPNDQ8N594 471 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 ENGASEQ8NFI3 743 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
ZNF540-206ENST00000589117 MRFAP1L1Q96HT8 127 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 SLC4A9Q96Q91 983 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 ALG1Q9BT22 464 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 PIH1D3Q9NQM4 214 aaKnown RBP8.56□□□□□ -1.04
ZNF540-206ENST00000589117 HPS5Q9UPZ3 1129 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 MAFBQ9Y5Q3 323 aaPredicted RBP8.56□□□□□ -1.04
ZNF540-206ENST00000589117 SLC12A7Q9Y666 1083 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 STRCQ7RTU9 1775 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 LAMA4Q16363 1823 aa8.56□□□□□ -1.04
ZNF540-206ENST00000589117 NRDCO43847 1150 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 SLC10A3P09131 477 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 ANTXR2P58335 489 aa8.55□□□□□ -1.04
ZNF540-206ENST00000589117 RBM6P78332 1123 aaKnown RBP8.55□□□□□ -1.04
ZNF540-206ENST00000589117 ANO1Q5XXA6 986 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms