RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TMEM67Q5HYA8 995 aa6.23□□□□□ -1.41
SMAD4-207ENST00000589076 KIRREL1Q96J84 757 aa6.23□□□□□ -1.41
SMAD4-207ENST00000589076 HEXIM2Q96MH2 286 aaKnown RBP6.23□□□□□ -1.41
SMAD4-207ENST00000589076 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
SMAD4-207ENST00000589076 CEP44Q9C0F1 390 aa6.23□□□□□ -1.41
SMAD4-207ENST00000589076 CTNND2Q9UQB3 1225 aa6.23□□□□□ -1.41
SMAD4-207ENST00000589076 FAM155AB1AL88 458 aaPredicted RBP6.22□□□□□ -1.41
SMAD4-207ENST00000589076 NFIBO00712 420 aa6.22□□□□□ -1.41
SMAD4-207ENST00000589076 FANCGO15287 622 aa6.22□□□□□ -1.41
SMAD4-207ENST00000589076 GLI1P08151 1106 aa6.22□□□□□ -1.41
SMAD4-207ENST00000589076 CYFIP1Q7L576 1253 aa6.22□□□□□ -1.41
SMAD4-207ENST00000589076 CCER1Q8TC90 406 aaPredicted RBP6.22□□□□□ -1.41
SMAD4-207ENST00000589076 GPBAR1Q8TDU6 330 aa6.22□□□□□ -1.41
SMAD4-207ENST00000589076 MAPK8IP1Q9UQF2 711 aa6.22□□□□□ -1.41
SMAD4-207ENST00000589076 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
SMAD4-207ENST00000589076 KCNA1Q09470 495 aa6.21□□□□□ -1.42
SMAD4-207ENST00000589076 LRRC14Q15048 493 aa6.21□□□□□ -1.42
SMAD4-207ENST00000589076 ECM1Q16610 540 aa6.21□□□□□ -1.42
SMAD4-207ENST00000589076 SYDE1Q6ZW31 735 aaPredicted RBP6.21□□□□□ -1.42
SMAD4-207ENST00000589076 SPACA3Q8IXA5 215 aa6.21□□□□□ -1.42
SMAD4-207ENST00000589076 LIN37Q96GY3 246 aaPredicted RBP6.21□□□□□ -1.42
SMAD4-207ENST00000589076 RBCK1Q9BYM8 510 aa6.21□□□□□ -1.42
SMAD4-207ENST00000589076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMAD4-207ENST00000589076 TRIM37O94972 964 aa6.2□□□□□ -1.42
SMAD4-207ENST00000589076 PPM1JQ5JR12 505 aa6.2□□□□□ -1.42
SMAD4-207ENST00000589076 SIAH1Q8IUQ4 282 aa6.2□□□□□ -1.42
SMAD4-207ENST00000589076 LRRC56Q8IYG6 542 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-207ENST00000589076 ZNF507Q8TCN5 953 aa6.2□□□□□ -1.42
SMAD4-207ENST00000589076 ELMO3Q96BJ8 720 aa6.2□□□□□ -1.42
SMAD4-207ENST00000589076 TPX2Q9ULW0 747 aaKnown RBP6.2□□□□□ -1.42
SMAD4-207ENST00000589076 CSADQ9Y600 493 aa6.2□□□□□ -1.42
SMAD4-207ENST00000589076 PITPNM2Q9BZ72 1349 aa6.2□□□□□ -1.42
SMAD4-207ENST00000589076 LRIG2O94898 1065 aa6.19□□□□□ -1.42
SMAD4-207ENST00000589076 GSTT1P30711 240 aa6.19□□□□□ -1.42
SMAD4-207ENST00000589076 SCARA3Q6AZY7 606 aa6.19□□□□□ -1.42
SMAD4-207ENST00000589076 ZNF746Q6NUN9 644 aaPredicted RBP6.19□□□□□ -1.42
SMAD4-207ENST00000589076 NPAS4Q8IUM7 802 aa6.19□□□□□ -1.42
SMAD4-207ENST00000589076 PODXL2Q9NZ53 605 aa6.19□□□□□ -1.42
SMAD4-207ENST00000589076 DCDC2CA8MYV0 355 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 RAC2P15153 192 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 CFPP27918 469 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 GDNFP39905 211 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 ZNF252P-AS1Q0IIN9 211 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 NKPD1Q17RQ9 610 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 LLGL2Q6P1M3 1020 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 NXPE4Q6UWF7 544 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 FAM214BQ7L5A3 538 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 C12orf40Q86WS4 652 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 FBXO15Q8NCQ5 510 aaPredicted RBP6.18□□□□□ -1.42
SMAD4-207ENST00000589076 STK35Q8TDR2 534 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 SRCIN1Q9C0H9 1055 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 CARS2Q9HA77 564 aaKnown RBP6.18□□□□□ -1.42
SMAD4-207ENST00000589076 PCDHA4Q9UN74 947 aa6.18□□□□□ -1.42
SMAD4-207ENST00000589076 TMEM253P0C7T8 217 aa6.17□□□□□ -1.42
SMAD4-207ENST00000589076 ZSCAN22P10073 491 aaPredicted RBP6.17□□□□□ -1.42
SMAD4-207ENST00000589076 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMAD4-207ENST00000589076 SFRP5Q5T4F7 317 aa6.17□□□□□ -1.42
SMAD4-207ENST00000589076 ZBTB37Q5TC79 503 aa6.17□□□□□ -1.42
SMAD4-207ENST00000589076 PRR23BQ6ZRT6 265 aa6.17□□□□□ -1.42
SMAD4-207ENST00000589076 ARMCX6Q7L4S7 300 aa6.17□□□□□ -1.42
SMAD4-207ENST00000589076 MFSD4AQ8N468 514 aa6.17□□□□□ -1.42
SMAD4-207ENST00000589076 NECAB3Q96P71 396 aaPredicted RBP6.17□□□□□ -1.42
SMAD4-207ENST00000589076 PPM1HQ9ULR3 514 aa6.17□□□□□ -1.42
SMAD4-207ENST00000589076 PLCB3Q01970 1234 aa6.16□□□□□ -1.42
SMAD4-207ENST00000589076 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
SMAD4-207ENST00000589076 CDKAL1Q5VV42 579 aa6.16□□□□□ -1.42
SMAD4-207ENST00000589076 LILRA6Q6PI73 481 aa6.16□□□□□ -1.42
SMAD4-207ENST00000589076 PI16Q6UXB8 463 aa6.16□□□□□ -1.42
SMAD4-207ENST00000589076 TPTE2Q6XPS3 522 aa6.16□□□□□ -1.42
SMAD4-207ENST00000589076 HSPA12BQ96MM6 686 aa6.16□□□□□ -1.42
SMAD4-207ENST00000589076 BIN2Q9UBW5 565 aaPredicted RBP6.16□□□□□ -1.42
SMAD4-207ENST00000589076 PNMA6FA0A0J9YX94 578 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 EOMESO95936 686 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 IGHA2P01877 340 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 CYP7A1P22680 504 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 FYB2Q5VWT5 728 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 HDXQ7Z353 690 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 MFSD2AQ8NA29 543 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 COX4I2Q96KJ9 171 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 NSUN3Q9H649 340 aaKnown RBP6.15□□□□□ -1.42
SMAD4-207ENST00000589076 CACNA2D2Q9NY47 1150 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 CYP8B1Q9UNU6 501 aa6.15□□□□□ -1.42
SMAD4-207ENST00000589076 RING1Q06587 406 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 C22orf34Q6ZV56 151 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 TMC7Q7Z402 723 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 THAP5Q7Z6K1 395 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 TXNDC2Q86VQ3 553 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 GRIN3AQ8TCU5 1115 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 DIRC2Q96SL1 478 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 GZF1Q9H116 711 aaPredicted RBP6.14□□□□□ -1.43
SMAD4-207ENST00000589076 EPB41L4BQ9H329 900 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 ATP13A1Q9HD20 1204 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 DCP1AQ9NPI6 582 aaPredicted RBP6.14□□□□□ -1.43
SMAD4-207ENST00000589076 DCTN4Q9UJW0 460 aa6.14□□□□□ -1.43
SMAD4-207ENST00000589076 GNEQ9Y223 722 aaKnown RBP6.14□□□□□ -1.43
SMAD4-207ENST00000589076 PRAMEF27A3QJZ7 478 aa6.13□□□□□ -1.43
SMAD4-207ENST00000589076 TCAF2A6NFQ2 919 aa6.13□□□□□ -1.43
SMAD4-207ENST00000589076 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.13□□□□□ -1.43
SMAD4-207ENST00000589076 H3BS24 57 aa6.13□□□□□ -1.43
SMAD4-207ENST00000589076 GIPC1O14908 333 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms