RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 RRP1BQ14684 758 aaKnown RBP25.18■■□□□ 1.62
MBD3-205ENST00000589064 ANKRD23Q86SG2 305 aa25.18■■□□□ 1.62
MBD3-205ENST00000589064 CCDC84Q86UT8 332 aaPredicted RBP25.18■■□□□ 1.62
MBD3-205ENST00000589064 ERO1AQ96HE7 468 aa25.18■■□□□ 1.62
MBD3-205ENST00000589064 PDHXO00330 501 aa25.17■■□□□ 1.62
MBD3-205ENST00000589064 PDE6AP16499 860 aa25.17■■□□□ 1.62
MBD3-205ENST00000589064 USP5P45974 858 aa25.17■■□□□ 1.62
MBD3-205ENST00000589064 CERS3Q8IU89 383 aa25.17■■□□□ 1.62
MBD3-205ENST00000589064 FOXP4Q8IVH2 680 aaPredicted RBP25.17■■□□□ 1.62
MBD3-205ENST00000589064 CRBNQ96SW2 442 aa25.17■■□□□ 1.62
MBD3-205ENST00000589064 PAG1Q9NWQ8 432 aa25.17■■□□□ 1.62
MBD3-205ENST00000589064 HERC5Q9UII4 1024 aaKnown RBP25.17■■□□□ 1.62
MBD3-205ENST00000589064 HPS5Q9UPZ3 1129 aa25.17■■□□□ 1.62
MBD3-205ENST00000589064 TRIM17Q9Y577 477 aa25.17■■□□□ 1.62
MBD3-205ENST00000589064 TLR2O60603 784 aa25.16■■□□□ 1.62
MBD3-205ENST00000589064 CAP2P40123 477 aa25.16■■□□□ 1.62
MBD3-205ENST00000589064 HAUS7Q99871 368 aa25.16■■□□□ 1.62
MBD3-205ENST00000589064 SLC4A8Q2Y0W8 1093 aa25.15■■□□□ 1.62
MBD3-205ENST00000589064 GPAT2Q6NUI2 795 aa25.15■■□□□ 1.62
MBD3-205ENST00000589064 OTOP1Q7RTM1 612 aa25.15■■□□□ 1.62
MBD3-205ENST00000589064 RIOK1Q9BRS2 568 aaKnown RBP25.15■■□□□ 1.62
MBD3-205ENST00000589064 ZNF532Q9HCE3 1301 aa25.15■■□□□ 1.62
MBD3-205ENST00000589064 MAGEB6P1A0A0J9YX57 407 aa25.15■■□□□ 1.62
MBD3-205ENST00000589064 TRIM75PA6NK02 468 aa25.15■■□□□ 1.62
MBD3-205ENST00000589064 CAP1Q01518 475 aa25.15■■□□□ 1.62
MBD3-205ENST00000589064 FBXO46Q6PJ61 603 aaPredicted RBP25.15■■□□□ 1.62
MBD3-205ENST00000589064 CRACR2BQ8N4Y2 399 aaPredicted RBP25.15■■□□□ 1.62
MBD3-205ENST00000589064 A0A0G2JLL6 359 aaPredicted RBP25.14■■□□□ 1.61
MBD3-205ENST00000589064 PRRT2Q7Z6L0 340 aaPredicted RBP25.14■■□□□ 1.61
MBD3-205ENST00000589064 METTL16Q86W50 562 aaKnown RBP25.14■■□□□ 1.61
MBD3-205ENST00000589064 TRIM34Q9BYJ4 488 aa25.14■■□□□ 1.61
MBD3-205ENST00000589064 DNAJC18Q9H819 358 aa25.14■■□□□ 1.61
MBD3-205ENST00000589064 TCRBV5S4A2TA0A5A2 114 aa25.13■■□□□ 1.61
MBD3-205ENST00000589064 HLA-DOAP06340 250 aa25.13■■□□□ 1.61
MBD3-205ENST00000589064 GADL1Q6ZQY3 521 aa25.13■■□□□ 1.61
MBD3-205ENST00000589064 FASTKD5Q7L8L6 764 aaKnown RBP25.13■■□□□ 1.61
MBD3-205ENST00000589064 EFCC1Q9HA90 598 aa25.13■■□□□ 1.61
MBD3-205ENST00000589064 SLFNL1Q499Z3 407 aa25.12■■□□□ 1.61
MBD3-205ENST00000589064 ECHDC1Q9NTX5 307 aa25.12■■□□□ 1.61
MBD3-205ENST00000589064 LAMB1P07942 1786 aa25.12■■□□□ 1.61
MBD3-205ENST00000589064 JAG1P78504 1218 aa25.11■■□□□ 1.61
MBD3-205ENST00000589064 SPP2Q13103 211 aa25.11■■□□□ 1.61
MBD3-205ENST00000589064 CPA4Q9UI42 421 aa25.11■■□□□ 1.61
MBD3-205ENST00000589064 DOCK2Q92608 1830 aa25.1■■□□□ 1.61
MBD3-205ENST00000589064 MAST2Q6P0Q8 1798 aa25.1■■□□□ 1.61
MBD3-205ENST00000589064 USP17L5A8MUK1 530 aa25.1■■□□□ 1.61
MBD3-205ENST00000589064 ADD2P35612 726 aa25.1■■□□□ 1.61
MBD3-205ENST00000589064 C17orf99Q6UX52 265 aa25.1■■□□□ 1.61
MBD3-205ENST00000589064 MYO5AQ9Y4I1 1855 aaKnown RBP25.1■■□□□ 1.61
MBD3-205ENST00000589064 CYP2C8P10632 490 aa25.09■■□□□ 1.61
MBD3-205ENST00000589064 ZNF280CQ8ND82 737 aa25.09■■□□□ 1.61
MBD3-205ENST00000589064 CRNKL1Q9BZJ0 848 aaKnown RBP25.09■■□□□ 1.61
MBD3-205ENST00000589064 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.09■■□□□ 1.618e-7■■■■■ 37.5
MBD3-205ENST00000589064 PTPN22Q9Y2R2 807 aa25.09■■□□□ 1.61
MBD3-205ENST00000589064 CHGBP05060 677 aa25.09■■□□□ 1.61
MBD3-205ENST00000589064 TSHZ3Q63HK5 1081 aa25.09■■□□□ 1.61
MBD3-205ENST00000589064 TTC6Q86TZ1 520 aa25.09■■□□□ 1.61
MBD3-205ENST00000589064 LCORLQ8N3X6 602 aa25.09■■□□□ 1.61
MBD3-205ENST00000589064 ARMT1Q9H993 441 aa25.09■■□□□ 1.61
MBD3-205ENST00000589064 ECM2O94769 699 aaPredicted RBP25.08■■□□□ 1.6
MBD3-205ENST00000589064 GDF11O95390 407 aa25.08■■□□□ 1.6
MBD3-205ENST00000589064 ARHGEF6Q15052 776 aa25.08■■□□□ 1.6
MBD3-205ENST00000589064 SHROOM1Q2M3G4 852 aaPredicted RBP25.08■■□□□ 1.6
MBD3-205ENST00000589064 PARK7Q99497 189 aaKnown RBP25.08■■□□□ 1.6
MBD3-205ENST00000589064 SOX10P56693 466 aa25.07■■□□□ 1.6
MBD3-205ENST00000589064 GPATCH3Q96I76 525 aa25.07■■□□□ 1.6
MBD3-205ENST00000589064 TBC1D2Q9BYX2 928 aa25.07■■□□□ 1.6
MBD3-205ENST00000589064 ARHGAP39Q9C0H5 1083 aa25.07■■□□□ 1.6
MBD3-205ENST00000589064 POLR3DP05423 398 aaPredicted RBP25.06■■□□□ 1.6
MBD3-205ENST00000589064 ASNSP08243 561 aa25.06■■□□□ 1.6
MBD3-205ENST00000589064 RGS19P49795 217 aa25.06■■□□□ 1.6
MBD3-205ENST00000589064 PLCD1P51178 756 aa25.06■■□□□ 1.6
MBD3-205ENST00000589064 LACTBP83111 547 aaPredicted RBP25.06■■□□□ 1.6
MBD3-205ENST00000589064 KIF22Q14807 665 aa25.06■■□□□ 1.6
MBD3-205ENST00000589064 SDR42E1Q8WUS8 393 aa25.06■■□□□ 1.6
MBD3-205ENST00000589064 AS3MTQ9HBK9 375 aa25.06■■□□□ 1.6
MBD3-205ENST00000589064 MCM9Q9NXL9 1143 aa25.06■■□□□ 1.6
MBD3-205ENST00000589064 SERPINB13Q9UIV8 391 aa25.06■■□□□ 1.6
MBD3-205ENST00000589064 ADGRA2Q96PE1 1338 aa25.05■■□□□ 1.6
MBD3-205ENST00000589064 PRKAB2O43741 272 aa25.05■■□□□ 1.6
MBD3-205ENST00000589064 HMGCS2P54868 508 aa25.05■■□□□ 1.6
MBD3-205ENST00000589064 UBE3CQ15386 1083 aa25.05■■□□□ 1.6
MBD3-205ENST00000589064 TREML2Q5T2D2 321 aa25.05■■□□□ 1.6
MBD3-205ENST00000589064 EHD4Q9H223 541 aa25.05■■□□□ 1.6
MBD3-205ENST00000589064 AGTPBP1Q9UPW5 1226 aa25.05■■□□□ 1.6
MBD3-205ENST00000589064 SLC45A1Q9Y2W3 748 aa25.05■■□□□ 1.6
MBD3-205ENST00000589064 MBD4O95243 580 aa25.04■■□□□ 1.6
MBD3-205ENST00000589064 ZSCAN25Q6NSZ9 544 aa25.04■■□□□ 1.6
MBD3-205ENST00000589064 TATDN1Q6P1N9 297 aa25.04■■□□□ 1.6
MBD3-205ENST00000589064 WDR18Q9BV38 432 aa25.04■■□□□ 1.6
MBD3-205ENST00000589064 OTUD7AQ8TE49 926 aaPredicted RBP25.03■■□□□ 1.6
MBD3-205ENST00000589064 DCP1AQ9NPI6 582 aaPredicted RBP25.03■■□□□ 1.6
MBD3-205ENST00000589064 GINM1Q9NU53 330 aa25.03■■□□□ 1.6
MBD3-205ENST00000589064 ZBTB21Q9ULJ3 1066 aa25.03■■□□□ 1.6
MBD3-205ENST00000589064 GH2P01242 217 aa25.02■■□□□ 1.6
MBD3-205ENST00000589064 EVX2Q03828 476 aa25.02■■□□□ 1.6
MBD3-205ENST00000589064 SH3D19Q5HYK7 790 aa25.02■■□□□ 1.6
MBD3-205ENST00000589064 PROCA1Q8NCQ7 364 aaPredicted RBP25.02■■□□□ 1.6
MBD3-205ENST00000589064 BCRP11274 1271 aa25.02■■□□□ 1.6
MBD3-205ENST00000589064 CTGFP29279 349 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms