RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
TPM4-209ENST00000588483 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
TPM4-209ENST00000588483 MCOLN1Q9GZU1 580 aa12.73□□□□□ -0.37
TPM4-209ENST00000588483 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
TPM4-209ENST00000588483 DNAJC18Q9H819 358 aa12.73□□□□□ -0.37
TPM4-209ENST00000588483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.73□□□□□ -0.37
TPM4-209ENST00000588483 AFG3L2Q9Y4W6 797 aa12.73□□□□□ -0.37
TPM4-209ENST00000588483 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 TTC41PQ6P2S7 1318 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 SALL3Q9BXA9 1300 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 A0A0G2JLL6 359 aaPredicted RBP12.72□□□□□ -0.37
TPM4-209ENST00000588483 BTBD19C9JJ37 291 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 FKTNO75072 461 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 ADD2P35612 726 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 UBE3CQ15386 1083 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 PKN2Q16513 984 aaKnown RBP12.72□□□□□ -0.37
TPM4-209ENST00000588483 PRRT2Q7Z6L0 340 aaPredicted RBP12.72□□□□□ -0.37
TPM4-209ENST00000588483 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 FOXP4Q8IVH2 680 aaPredicted RBP12.72□□□□□ -0.37
TPM4-209ENST00000588483 MAPKAPK5Q8IW41 473 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 MIGA1Q8NAN2 632 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 GCC1Q96CN9 775 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
TPM4-209ENST00000588483 GPATCH3Q96I76 525 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 EHD4Q9H223 541 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
TPM4-209ENST00000588483 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
TPM4-209ENST00000588483 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
TPM4-209ENST00000588483 CAP2P40123 477 aa12.71□□□□□ -0.37
TPM4-209ENST00000588483 DGKZQ13574 1117 aa12.71□□□□□ -0.37
TPM4-209ENST00000588483 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.37
TPM4-209ENST00000588483 TAOK2Q9UL54 1235 aa12.71□□□□□ -0.37
TPM4-209ENST00000588483 LOC285556D6RIA3 1793 aa12.71□□□□□ -0.38
TPM4-209ENST00000588483 CENPFP49454 3210 aa12.71□□□□□ -0.38
TPM4-209ENST00000588483 ADGRA2Q96PE1 1338 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 FAM196BA6NMK8 535 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 TLR2O60603 784 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 RRP1BQ14684 758 aaKnown RBP12.7□□□□□ -0.38
TPM4-209ENST00000588483 TAF1CQ15572 869 aaPredicted RBP12.7□□□□□ -0.38
TPM4-209ENST00000588483 TATDN1Q6P1N9 297 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 ZFYVE28Q9HCC9 887 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 SLC45A1Q9Y2W3 748 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 ZHX2Q9Y6X8 837 aa12.7□□□□□ -0.38
TPM4-209ENST00000588483 USP5P45974 858 aa12.69□□□□□ -0.38
TPM4-209ENST00000588483 ZSCAN25Q6NSZ9 544 aa12.69□□□□□ -0.38
TPM4-209ENST00000588483 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
TPM4-209ENST00000588483 FASTKD5Q7L8L6 764 aaKnown RBP12.69□□□□□ -0.38
TPM4-209ENST00000588483 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
TPM4-209ENST00000588483 PI4K2BQ8TCG2 481 aa12.69□□□□□ -0.38
TPM4-209ENST00000588483 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
TPM4-209ENST00000588483 CRNKL1Q9BZJ0 848 aaKnown RBP12.69□□□□□ -0.38
TPM4-209ENST00000588483 ERC2O15083 957 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 ASNSP08243 561 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 SP3Q02447 781 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 GABPAQ06546 454 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 SH3D19Q5HYK7 790 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 TTC6Q86TZ1 520 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 SMC5Q8IY18 1101 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 LCORLQ8N3X6 602 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 WDR18Q9BV38 432 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 DCP1AQ9NPI6 582 aaPredicted RBP12.68□□□□□ -0.38
TPM4-209ENST00000588483 ATP8A2Q9NTI2 1148 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 SERPINB13Q9UIV8 391 aa12.68□□□□□ -0.38
TPM4-209ENST00000588483 USP17L5A8MUK1 530 aa12.67□□□□□ -0.38
TPM4-209ENST00000588483 PDHXO00330 501 aa12.67□□□□□ -0.38
TPM4-209ENST00000588483 GLRX3O76003 335 aaKnown RBP12.67□□□□□ -0.38
TPM4-209ENST00000588483 ZFYP08048 801 aaPredicted RBP12.67□□□□□ -0.38
TPM4-209ENST00000588483 MX1P20591 662 aa12.67□□□□□ -0.38
TPM4-209ENST00000588483 FBXO46Q6PJ61 603 aaPredicted RBP12.67□□□□□ -0.38
TPM4-209ENST00000588483 C17orf99Q6UX52 265 aa12.67□□□□□ -0.38
TPM4-209ENST00000588483 OTOP1Q7RTM1 612 aa12.67□□□□□ -0.38
TPM4-209ENST00000588483 CRACR2BQ8N4Y2 399 aaPredicted RBP12.67□□□□□ -0.38
TPM4-209ENST00000588483 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
TPM4-209ENST00000588483 ZNF280CQ8ND82 737 aa12.67□□□□□ -0.38
TPM4-209ENST00000588483 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
TPM4-209ENST00000588483 STAP2Q9UGK3 403 aa12.67□□□□□ -0.38
TPM4-209ENST00000588483 SAP30BPQ9UHR5 308 aaKnown RBP12.67□□□□□ -0.38
TPM4-209ENST00000588483 BRCA2P51587 3418 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 MBD4O95243 580 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 JAG1P78504 1218 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 TSHZ3Q63HK5 1081 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
TPM4-209ENST00000588483 PARK7Q99497 189 aaKnown RBP12.66□□□□□ -0.38
TPM4-209ENST00000588483 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 PUS7LQ9H0K6 701 aaKnown RBP12.66□□□□□ -0.38
TPM4-209ENST00000588483 BCL11AQ9H165 835 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 ZBTB21Q9ULJ3 1066 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 AGTPBP1Q9UPW5 1226 aa12.66□□□□□ -0.38
TPM4-209ENST00000588483 BAZ2AQ9UIF9 1905 aaKnown RBP12.66□□□□□ -0.38
TPM4-209ENST00000588483 TRIM75PA6NK02 468 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 CHGBP05060 677 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 SHMT1P34896 483 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 PLCD1P51178 756 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 CAP1Q01518 475 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms