RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 NBPF3Q9H094 633 aa18.76■□□□□ 0.59
RANBP3-209ENST00000587411 ZSWIM4Q9H7M6 989 aa18.76■□□□□ 0.59
RANBP3-209ENST00000587411 SERTAD1Q9UHV2 236 aa18.76■□□□□ 0.59
RANBP3-209ENST00000587411 PUF60Q9UHX1 559 aaKnown RBP18.76■□□□□ 0.59
RANBP3-209ENST00000587411 FBXO2Q9UK22 296 aaPredicted RBP18.76■□□□□ 0.59
RANBP3-209ENST00000587411 LAMB4A4D0S4 1761 aa18.76■□□□□ 0.59
RANBP3-209ENST00000587411 UBN2Q6ZU65 1347 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 GOLGA8AA7E2F4 631 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 POLR2DO15514 142 aaKnown RBP18.75■□□□□ 0.59
RANBP3-209ENST00000587411 RAD9BQ6WBX8 426 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 SGMS1Q86VZ5 419 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 CCDC51Q96ER9 411 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 TEX13AQ9BXU3 409 aaPredicted RBP18.75■□□□□ 0.59
RANBP3-209ENST00000587411 IRX2Q9BZI1 471 aaPredicted RBP18.75■□□□□ 0.59
RANBP3-209ENST00000587411 SAMSN1Q9NSI8 373 aaKnown RBP18.75■□□□□ 0.59
RANBP3-209ENST00000587411 TTF2Q9UNY4 1162 aaKnown RBP18.75■□□□□ 0.59
RANBP3-209ENST00000587411 PRR29P0C7W0 189 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 ADORA1P30542 326 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 ZAP70P43403 619 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 SSRP1Q08945 709 aaKnown RBP18.75■□□□□ 0.59
RANBP3-209ENST00000587411 KIF4BQ2VIQ3 1234 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 NOM1Q5C9Z4 860 aaKnown RBP18.75■□□□□ 0.59
RANBP3-209ENST00000587411 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 CTR9Q6PD62 1173 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 C10orf67Q8IYJ2 551 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 SPATA20Q8TB22 786 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 ACBD3Q9H3P7 528 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 LCMT1Q9UIC8 334 aa18.75■□□□□ 0.59
RANBP3-209ENST00000587411 TJP1Q07157 1748 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 RANBP6O60518 1105 aaKnown RBP18.74■□□□□ 0.59
RANBP3-209ENST00000587411 WHAMMP3Q1A5X7 153 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 RILPL1Q5EBL4 403 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 IGSF22Q8N9C0 903 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 CTAGE1Q96RT6 745 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 PNKPQ96T60 521 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 NLRP2Q9NX02 1062 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 RSPH14Q9UHP6 348 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 ZNF569Q5MCW4 686 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 SPATA1Q5VX52 437 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 NFXL1Q6ZNB6 911 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 GOLGA6L1Q8N7Z2 621 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 FAM71BQ8TC56 605 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 MED15Q96RN5 788 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
RANBP3-209ENST00000587411 ATRNO75882 1429 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 SEMA3EO15041 775 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 FMNL1O95466 1100 aaPredicted RBP18.73■□□□□ 0.59
RANBP3-209ENST00000587411 RXRAP19793 462 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 CCDC57Q2TAC2 916 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 HSP90B2PQ58FF3 399 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 CNGA4Q8IV77 575 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 ABCB6Q9NP58 842 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 MKRN1Q9UHC7 482 aaKnown RBP18.73■□□□□ 0.59
RANBP3-209ENST00000587411 MFAP3LO75121 409 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 MMP1P03956 469 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 FECHP22830 423 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 PBX1P40424 430 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 RBL2Q08999 1139 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 SCARF1Q14162 830 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 ZNF827Q17R98 1081 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 SPECC1Q5M775 1068 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 SLC9C2Q5TAH2 1124 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 APTXQ7Z2E3 356 aaKnown RBP18.73■□□□□ 0.59
RANBP3-209ENST00000587411 MYO1AQ9UBC5 1043 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 CEP131Q9UPN4 1083 aa18.73■□□□□ 0.59
RANBP3-209ENST00000587411 NBPF26B4DH59 902 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 TRIM66O15016 1216 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 ACTN4O43707 911 aaKnown RBP18.72■□□□□ 0.59
RANBP3-209ENST00000587411 CABP4P57796 275 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 FILIP1LQ4L180 1135 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 NBPF14Q5TI25 921 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 NBPF10Q6P3W6 841 aaKnown RBP18.72■□□□□ 0.59
RANBP3-209ENST00000587411 NBPF15Q8N660 670 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 IGDCC4Q8TDY8 1250 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 FOXP1Q9H334 677 aaPredicted RBP18.72■□□□□ 0.59
RANBP3-209ENST00000587411 FAM217BQ9NTX9 383 aaPredicted RBP18.72■□□□□ 0.59
RANBP3-209ENST00000587411 MEGF6O75095 1541 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 CTAGE15A4D2H0 777 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 CTAGE8P0CG41 777 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 GLI3P10071 1580 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 LIFRP42702 1097 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 CTAGE6Q86UF2 777 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 CTAGE4Q8IX94 777 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 SLC26A6Q9BXS9 759 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 LY9Q9HBG7 655 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 MED4Q9NPJ6 270 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 TBC1D2BQ9UPU7 963 aa18.72■□□□□ 0.59
RANBP3-209ENST00000587411 SRPRBQ9Y5M8 271 aaKnown RBP18.72■□□□□ 0.59
RANBP3-209ENST00000587411 ADD2P35612 726 aa18.71■□□□□ 0.59
RANBP3-209ENST00000587411 TOB1P50616 345 aaPredicted RBP18.71■□□□□ 0.59
RANBP3-209ENST00000587411 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.59
RANBP3-209ENST00000587411 NAPGQ99747 312 aaPredicted RBP18.71■□□□□ 0.59
RANBP3-209ENST00000587411 ADD3Q9UEY8 706 aaKnown RBP18.71■□□□□ 0.59
RANBP3-209ENST00000587411 FAN1Q9Y2M0 1017 aa18.71■□□□□ 0.59
RANBP3-209ENST00000587411 NID2Q14112 1375 aa18.71■□□□□ 0.59
RANBP3-209ENST00000587411 ITIH6Q6UXX5 1313 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms