RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■■■□ 26.6
CXXC1-208ENST00000587170 OSBPL5Q9H0X9 879 aaPredicted RBP17.54■□□□□ 0.4
CXXC1-208ENST00000587170 SMC4Q9NTJ3 1288 aa17.54■□□□□ 0.4
CXXC1-208ENST00000587170 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
CXXC1-208ENST00000587170 EYSQ5T1H1 3165 aa17.54■□□□□ 0.4
CXXC1-208ENST00000587170 TFRCP02786 760 aaKnown RBP17.53■□□□□ 0.4
CXXC1-208ENST00000587170 HMGCRP04035 888 aa17.53■□□□□ 0.4
CXXC1-208ENST00000587170 GCLCP48506 637 aaPredicted RBP17.53■□□□□ 0.4
CXXC1-208ENST00000587170 MECOMQ03112 1051 aa17.53■□□□□ 0.4
CXXC1-208ENST00000587170 ABCF2Q9UG63 623 aa17.53■□□□□ 0.4
CXXC1-208ENST00000587170 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
CXXC1-208ENST00000587170 BMP8BP34820 402 aa17.52■□□□□ 0.4
CXXC1-208ENST00000587170 PICALMQ13492 652 aa17.52■□□□□ 0.4
CXXC1-208ENST00000587170 MTX1Q13505 466 aa17.52■□□□□ 0.4
CXXC1-208ENST00000587170 NECAB2Q7Z6G3 386 aa17.52■□□□□ 0.4
CXXC1-208ENST00000587170 CCDC84Q86UT8 332 aaPredicted RBP17.52■□□□□ 0.4
CXXC1-208ENST00000587170 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
CXXC1-208ENST00000587170 PAWRQ96IZ0 340 aaKnown RBP17.52■□□□□ 0.4
CXXC1-208ENST00000587170 GDF15Q99988 308 aa17.52■□□□□ 0.4
CXXC1-208ENST00000587170 LTBP2Q14767 1821 aa17.51■□□□□ 0.39
CXXC1-208ENST00000587170 A0A1B0GUL7 405 aa17.51■□□□□ 0.39
CXXC1-208ENST00000587170 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
CXXC1-208ENST00000587170 MVPQ14764 893 aaKnown RBP17.51■□□□□ 0.39
CXXC1-208ENST00000587170 SH3D19Q5HYK7 790 aa17.51■□□□□ 0.39
CXXC1-208ENST00000587170 GPR153Q6NV75 609 aa17.51■□□□□ 0.39
CXXC1-208ENST00000587170 ZNF280CQ8ND82 737 aa17.51■□□□□ 0.39
CXXC1-208ENST00000587170 DIS3LQ8TF46 1054 aaKnown RBP17.51■□□□□ 0.39
CXXC1-208ENST00000587170 MORF4L1Q9UBU8 362 aa17.51■□□□□ 0.39
CXXC1-208ENST00000587170 GJD2Q9UKL4 321 aa17.51■□□□□ 0.39
CXXC1-208ENST00000587170 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
CXXC1-208ENST00000587170 TIMM10P62072 90 aa17.5■□□□□ 0.39
CXXC1-208ENST00000587170 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
CXXC1-208ENST00000587170 NSUN4Q96CB9 384 aaKnown RBP17.5■□□□□ 0.39
CXXC1-208ENST00000587170 XAGE2Q96GT9 111 aa17.5■□□□□ 0.39
CXXC1-208ENST00000587170 LRCH3Q96II8 777 aa17.5■□□□□ 0.39
CXXC1-208ENST00000587170 MEIS3Q99687 375 aa17.5■□□□□ 0.39
CXXC1-208ENST00000587170 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.5■□□□□ 0.39
CXXC1-208ENST00000587170 RPTORQ8N122 1335 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 MYH8P13535 1937 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 FAM196BA6NMK8 535 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 CAP2P40123 477 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 SPP2Q13103 211 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 PABPC4Q13310 644 aaKnown RBP eCLIP17.49■□□□□ 0.39
CXXC1-208ENST00000587170 ASCC2Q9H1I8 757 aaPredicted RBP17.49■□□□□ 0.39
CXXC1-208ENST00000587170 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 STAP2Q9UGK3 403 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 AKAP2Q9Y2D5 859 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 ZNF236Q9UL36 1845 aa17.49■□□□□ 0.39
CXXC1-208ENST00000587170 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
CXXC1-208ENST00000587170 HMGCS2P54868 508 aa17.48■□□□□ 0.39
CXXC1-208ENST00000587170 GSTO1P78417 241 aa17.48■□□□□ 0.39
CXXC1-208ENST00000587170 RRP1BQ14684 758 aaKnown RBP17.48■□□□□ 0.39
CXXC1-208ENST00000587170 MAP3K21Q5TCX8 1036 aa17.48■□□□□ 0.39
CXXC1-208ENST00000587170 API5Q9BZZ5 524 aaKnown RBP17.48■□□□□ 0.39
CXXC1-208ENST00000587170 HERC5Q9UII4 1024 aaKnown RBP17.48■□□□□ 0.39
CXXC1-208ENST00000587170 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.48■□□□□ 0.39
CXXC1-208ENST00000587170 RLFQ13129 1914 aa17.48■□□□□ 0.39
CXXC1-208ENST00000587170 VCANP13611 3396 aa17.48■□□□□ 0.39
CXXC1-208ENST00000587170 PARP14Q460N5 1801 aa17.47■□□□□ 0.39
CXXC1-208ENST00000587170 TFCP2Q12800 502 aa17.47■□□□□ 0.39
CXXC1-208ENST00000587170 WDR18Q9BV38 432 aa17.47■□□□□ 0.39
CXXC1-208ENST00000587170 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
CXXC1-208ENST00000587170 TAOK2Q9UL54 1235 aa17.47■□□□□ 0.39
CXXC1-208ENST00000587170 OGDHLQ9ULD0 1010 aa17.47■□□□□ 0.39
CXXC1-208ENST00000587170 NOB1Q9ULX3 412 aaKnown RBP17.47■□□□□ 0.39
CXXC1-208ENST00000587170 PRUNE2Q8WUY3 3088 aa17.47■□□□□ 0.39
CXXC1-208ENST00000587170 A0A0G2JMZ2 1700 aa17.47■□□□□ 0.39
CXXC1-208ENST00000587170 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
CXXC1-208ENST00000587170 USP17L5A8MUK1 530 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 LDHCP07864 332 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 PI16Q6UXB8 463 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 C7orf61Q8IZ16 206 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 SPATA5Q8NB90 893 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 SLC17A8Q8NDX2 589 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 TRIB2Q92519 343 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 CDCA7LQ96GN5 454 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 NBPF3Q9H094 633 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 CDH23Q9H251 3354 aa17.46■□□□□ 0.39
CXXC1-208ENST00000587170 DLL1O00548 723 aa17.45■□□□□ 0.38
CXXC1-208ENST00000587170 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
CXXC1-208ENST00000587170 XRCC5P13010 732 aaKnown RBP17.45■□□□□ 0.38
CXXC1-208ENST00000587170 HOXA7P31268 230 aaPredicted RBP17.45■□□□□ 0.38
CXXC1-208ENST00000587170 TRIM32Q13049 653 aa17.45■□□□□ 0.38
CXXC1-208ENST00000587170 LRIT3Q3SXY7 679 aa17.45■□□□□ 0.38
CXXC1-208ENST00000587170 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
CXXC1-208ENST00000587170 AS3MTQ9HBK9 375 aa17.45■□□□□ 0.38
CXXC1-208ENST00000587170 PFASO15067 1338 aa17.45■□□□□ 0.38
CXXC1-208ENST00000587170 GNAI3P08754 354 aa17.44■□□□□ 0.38
CXXC1-208ENST00000587170 SOCS4Q8WXH5 440 aa17.44■□□□□ 0.38
CXXC1-208ENST00000587170 DHX36Q9H2U1 1008 aaKnown RBP17.44■□□□□ 0.38
CXXC1-208ENST00000587170 ASNSP08243 561 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 COL6A1P12109 1028 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 MCAMP43121 646 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 BACE1P56817 501 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 MTMR2Q13614 643 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 TBC1D9Q6ZT07 1266 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 TEX11Q8IYF3 940 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 USP6NLQ92738 828 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms