RNA–Protein interactions for RNA: ENST00000587167.1

SPHK1-204, Transcript of sphingosine kinase 1, humanhuman

TSL 4

Gene SPHK1, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-204ENST00000587167 TNRC18O15417 2968 aaPredicted RBP23.54■■□□□ 1.36
SPHK1-204ENST00000587167 MBD4O95243 580 aa23.54■■□□□ 1.36
SPHK1-204ENST00000587167 SDSP20132 328 aa23.54■■□□□ 1.36
SPHK1-204ENST00000587167 SOX10P56693 466 aa23.54■■□□□ 1.36
SPHK1-204ENST00000587167 LCORLQ8N3X6 602 aa23.54■■□□□ 1.36
SPHK1-204ENST00000587167 TGFBRAP1Q8WUH2 860 aa23.54■■□□□ 1.36
SPHK1-204ENST00000587167 FAM151AQ8WW52 585 aa23.54■■□□□ 1.36
SPHK1-204ENST00000587167 OSBP2Q969R2 916 aa23.54■■□□□ 1.36
SPHK1-204ENST00000587167 ARMT1Q9H993 441 aa23.54■■□□□ 1.36
SPHK1-204ENST00000587167 TESPA1A2RU30 521 aaPredicted RBP23.53■■□□□ 1.36
SPHK1-204ENST00000587167 ENTPD3O75355 529 aa23.53■■□□□ 1.36
SPHK1-204ENST00000587167 ZFPM1Q8IX07 1006 aa23.53■■□□□ 1.36
SPHK1-204ENST00000587167 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.53■■□□□ 1.36
SPHK1-204ENST00000587167 DDX60LQ5H9U9 1706 aaKnown RBP23.53■■□□□ 1.36
SPHK1-204ENST00000587167 SIPA1L1O43166 1804 aa23.52■■□□□ 1.36
SPHK1-204ENST00000587167 M0R2C6 588 aa23.52■■□□□ 1.36
SPHK1-204ENST00000587167 USP5P45974 858 aa23.52■■□□□ 1.36
SPHK1-204ENST00000587167 ZMYM1Q5SVZ6 1142 aa23.52■■□□□ 1.36
SPHK1-204ENST00000587167 FBXO46Q6PJ61 603 aaPredicted RBP23.52■■□□□ 1.36
SPHK1-204ENST00000587167 TICAM2Q86XR7 235 aa23.52■■□□□ 1.36
SPHK1-204ENST00000587167 MAPKAPK5Q8IW41 473 aa23.52■■□□□ 1.36
SPHK1-204ENST00000587167 SEC62Q99442 399 aaKnown RBP23.52■■□□□ 1.36
SPHK1-204ENST00000587167 CRNKL1Q9BZJ0 848 aaKnown RBP23.52■■□□□ 1.36
SPHK1-204ENST00000587167 RPAP1Q9BWH6 1393 aaPredicted RBP23.52■■□□□ 1.36
SPHK1-204ENST00000587167 NPM3O75607 178 aaKnown RBP23.51■■□□□ 1.35
SPHK1-204ENST00000587167 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.51■■□□□ 1.35
SPHK1-204ENST00000587167 PTPN18Q99952 460 aa23.51■■□□□ 1.35
SPHK1-204ENST00000587167 FLT1P17948 1338 aa23.51■■□□□ 1.35
SPHK1-204ENST00000587167 OSBPL5Q9H0X9 879 aaPredicted RBP23.5■■□□□ 1.35
SPHK1-204ENST00000587167 MYH8P13535 1937 aa23.5■■□□□ 1.35
SPHK1-204ENST00000587167 GPAA1O43292 621 aa23.49■■□□□ 1.35
SPHK1-204ENST00000587167 NMIQ13287 307 aaPredicted RBP23.49■■□□□ 1.35
SPHK1-204ENST00000587167 ZSCAN29Q8IWY8 852 aaPredicted RBP23.49■■□□□ 1.35
SPHK1-204ENST00000587167 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.49■■□□□ 1.351e-6■■■■□ 26.5
SPHK1-204ENST00000587167 OPTNQ96CV9 577 aa23.49■■□□□ 1.35
SPHK1-204ENST00000587167 MS4A4AQ96JQ5 239 aa23.49■■□□□ 1.35
SPHK1-204ENST00000587167 FAM227BQ96M60 508 aa23.49■■□□□ 1.35
SPHK1-204ENST00000587167 ELP3Q9H9T3 547 aa23.49■■□□□ 1.35
SPHK1-204ENST00000587167 A0A0D9SFI3 127 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 HIP1O00291 1037 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 PRKAB2O43741 272 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 MAP3K9P80192 1104 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 SH3BP5LQ7L8J4 393 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 SDR42E1Q8WUS8 393 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 STRBPQ96SI9 672 aaKnown RBP23.48■■□□□ 1.35
SPHK1-204ENST00000587167 HELLSQ9NRZ9 838 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 DIAPH3Q9NSV4 1193 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 GTF3C3Q9Y5Q9 886 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 SLC4A4Q9Y6R1 1079 aa23.48■■□□□ 1.35
SPHK1-204ENST00000587167 COL2A1P02458 1487 aaPredicted RBP23.48■■□□□ 1.35
SPHK1-204ENST00000587167 DDTLA6NHG4 134 aaPredicted RBP23.47■■□□□ 1.35
SPHK1-204ENST00000587167 VGLL4Q14135 290 aa23.47■■□□□ 1.35
SPHK1-204ENST00000587167 BMP2KLQ5H9B9 411 aa23.47■■□□□ 1.35
SPHK1-204ENST00000587167 CRHR2Q13324 411 aa23.46■■□□□ 1.35
SPHK1-204ENST00000587167 MCMDC2Q4G0Z9 681 aa23.46■■□□□ 1.35
SPHK1-204ENST00000587167 ATRNL1Q5VV63 1379 aa23.46■■□□□ 1.35
SPHK1-204ENST00000587167 OTUD7BQ6GQQ9 843 aa23.46■■□□□ 1.35
SPHK1-204ENST00000587167 CCDC129Q6ZRS4 1044 aa23.46■■□□□ 1.35
SPHK1-204ENST00000587167 CNKSR2Q8WXI2 1034 aa23.46■■□□□ 1.35
SPHK1-204ENST00000587167 ATAD5Q96QE3 1844 aa23.46■■□□□ 1.35
SPHK1-204ENST00000587167 SAP30BPQ9UHR5 308 aaKnown RBP23.46■■□□□ 1.35
SPHK1-204ENST00000587167 CWC27Q6UX04 472 aaKnown RBP23.45■■□□□ 1.34
SPHK1-204ENST00000587167 HOOK2Q96ED9 719 aa23.45■■□□□ 1.34
SPHK1-204ENST00000587167 DCP1AQ9NPI6 582 aaPredicted RBP23.45■■□□□ 1.34
SPHK1-204ENST00000587167 ATP8A2Q9NTI2 1148 aa23.45■■□□□ 1.34
SPHK1-204ENST00000587167 GNAT2P19087 354 aa23.44■■□□□ 1.34
SPHK1-204ENST00000587167 OTOP1Q7RTM1 612 aa23.44■■□□□ 1.34
SPHK1-204ENST00000587167 DHX36Q9H2U1 1008 aaKnown RBP23.44■■□□□ 1.34
SPHK1-204ENST00000587167 PALD1Q9ULE6 856 aa23.44■■□□□ 1.34
SPHK1-204ENST00000587167 PDE4DIPQ5VU43 2346 aa23.43■■□□□ 1.34
SPHK1-204ENST00000587167 SLC4A8Q2Y0W8 1093 aa23.43■■□□□ 1.34
SPHK1-204ENST00000587167 MIGA2Q7L4E1 593 aa23.43■■□□□ 1.34
SPHK1-204ENST00000587167 BRI3BPQ8WY22 251 aa23.43■■□□□ 1.34
SPHK1-204ENST00000587167 TRIM17Q9Y577 477 aa23.43■■□□□ 1.34
SPHK1-204ENST00000587167 GSG1L2A8MUP6 293 aa23.42■■□□□ 1.34
SPHK1-204ENST00000587167 CHMLP26374 656 aa23.42■■□□□ 1.34
SPHK1-204ENST00000587167 DCAF15Q66K64 600 aa23.42■■□□□ 1.34
SPHK1-204ENST00000587167 ZNF589Q86UQ0 364 aaPredicted RBP23.42■■□□□ 1.34
SPHK1-204ENST00000587167 ERO1AQ96HE7 468 aa23.42■■□□□ 1.34
SPHK1-204ENST00000587167 DDRGK1Q96HY6 314 aa23.42■■□□□ 1.34
SPHK1-204ENST00000587167 MCM9Q9NXL9 1143 aa23.42■■□□□ 1.34
SPHK1-204ENST00000587167 CSADQ9Y600 493 aa23.42■■□□□ 1.34
SPHK1-204ENST00000587167 SNCAIPQ9Y6H5 919 aa23.42■■□□□ 1.34
SPHK1-204ENST00000587167 SPDYE5A6NIY4 337 aa23.41■■□□□ 1.34
SPHK1-204ENST00000587167 PATL2C9JE40 543 aaKnown RBP23.41■■□□□ 1.34
SPHK1-204ENST00000587167 APPP05067 770 aa23.41■■□□□ 1.34
SPHK1-204ENST00000587167 POLR3DP05423 398 aaPredicted RBP23.41■■□□□ 1.34
SPHK1-204ENST00000587167 GTF2A2P52657 109 aa23.41■■□□□ 1.34
SPHK1-204ENST00000587167 PI4KBQ9UBF8 816 aa23.41■■□□□ 1.34
SPHK1-204ENST00000587167 CCDC171Q6TFL3 1326 aa23.4■■□□□ 1.34
SPHK1-204ENST00000587167 HLA-DOAP06340 250 aa23.4■■□□□ 1.34
SPHK1-204ENST00000587167 SLURP2P0DP57 97 aa23.4■■□□□ 1.34
SPHK1-204ENST00000587167 CAP1Q01518 475 aa23.4■■□□□ 1.34
SPHK1-204ENST00000587167 CD99L2Q8TCZ2 262 aa23.4■■□□□ 1.34
SPHK1-204ENST00000587167 OTUD5Q96G74 571 aa23.4■■□□□ 1.34
SPHK1-204ENST00000587167 ZNF341Q9BYN7 854 aa23.4■■□□□ 1.34
SPHK1-204ENST00000587167 DOCK1Q14185 1865 aa23.4■■□□□ 1.34
SPHK1-204ENST00000587167 CCL15-CCL14A0A0B4J2E2 113 aa23.39■■□□□ 1.33
SPHK1-204ENST00000587167 MFAP1P55081 439 aaKnown RBP23.39■■□□□ 1.33
SPHK1-204ENST00000587167 SP3Q02447 781 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms