RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 NAV1Q8NEY1 1877 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 IRF6O14896 467 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 IGHDP01880 384 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 SNAPC2Q13487 334 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 LRRFIP1Q32MZ4 808 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 PICK1Q9NRD5 415 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 PALD1Q9ULE6 856 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
SMARCA4-210ENST00000586892 IGF2BP3O00425 579 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMARCA4-210ENST00000586892 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-210ENST00000586892 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-210ENST00000586892 FOXP4Q8IVH2 680 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-210ENST00000586892 TRIM34Q9BYJ4 488 aa16.05■□□□□ 0.16
SMARCA4-210ENST00000586892 STAP2Q9UGK3 403 aa16.05■□□□□ 0.16
SMARCA4-210ENST00000586892 SAP30BPQ9UHR5 308 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-210ENST00000586892 ATAD5Q96QE3 1844 aa16.05■□□□□ 0.16
SMARCA4-210ENST00000586892 CCL15-CCL14A0A0B4J2E2 113 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 FAM196BA6NMK8 535 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 ZFYP08048 801 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 CETPP11597 493 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 CCL15Q16663 113 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 LCORLQ8N3X6 602 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 BRI3BPQ8WY22 251 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 LNPKQ9C0E8 428 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 KCNH4Q9UQ05 1017 aa16.04■□□□□ 0.16
SMARCA4-210ENST00000586892 PHIPQ8WWQ0 1821 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 MBD4O95243 580 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 TBC1D8O95759 1140 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 PTPRAP18433 802 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 PDE1AP54750 535 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 NUCB1Q02818 461 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 SLFNL1Q499Z3 407 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 TTC6Q86TZ1 520 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 CHD1LQ86WJ1 897 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 PTPN18Q99952 460 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 EHD4Q9H223 541 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 ARMT1Q9H993 441 aa16.03■□□□□ 0.16
SMARCA4-210ENST00000586892 CXCL11O14625 94 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 RNF113AO15541 343 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 CHGBP05060 677 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 CAP2P40123 477 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 SDR42E1Q8WUS8 393 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 APPBP2Q92624 585 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 PUS7LQ9H0K6 701 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 DNAJC18Q9H819 358 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 ATP8A2Q9NTI2 1148 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 SERPINB13Q9UIV8 391 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 ZHX2Q9Y6X8 837 aa16.02■□□□□ 0.16
SMARCA4-210ENST00000586892 PTPRFP10586 1907 aa16.02■□□□□ 0.15
SMARCA4-210ENST00000586892 SLC4A8Q2Y0W8 1093 aa16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 TNS4Q8IZW8 715 aa16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 TBC1D2Q9BYX2 928 aa16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 ZCCHC17Q9NP64 241 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 DCP1AQ9NPI6 582 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 GINM1Q9NU53 330 aa16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 MCM9Q9NXL9 1143 aa16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 AFG3L2Q9Y4W6 797 aa16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 BAZ2AQ9UIF9 1905 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-210ENST00000586892 POLR3DP05423 398 aaPredicted RBP16■□□□□ 0.15
SMARCA4-210ENST00000586892 ASNSP08243 561 aa16■□□□□ 0.15
SMARCA4-210ENST00000586892 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
SMARCA4-210ENST00000586892 FSD1Q9BTV5 496 aa16■□□□□ 0.15
SMARCA4-210ENST00000586892 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
SMARCA4-210ENST00000586892 BTBD19C9JJ37 291 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 GPR25O00155 361 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 PRKAB2O43741 272 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 PLCD1P51178 756 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 CRHR2Q13324 411 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 RRP1BQ14684 758 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 TATDN1Q6P1N9 297 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 FAM43AQ8N2R8 423 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 OSBP2Q969R2 916 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 EVI5LQ96CN4 794 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 SLC4A4Q9Y6R1 1079 aa15.99■□□□□ 0.15
SMARCA4-210ENST00000586892 A0A0G2JLL6 359 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 USP17L5A8MUK1 530 aa15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 TAF1CQ15572 869 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 FASTKD5Q7L8L6 764 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 PRRT2Q7Z6L0 340 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 ANKRD23Q86SG2 305 aa15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 TICAM2Q86XR7 235 aa15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 AMOTL1Q8IY63 956 aa15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 ZNF296Q8WUU4 475 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 STRBPQ96SI9 672 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 R3HDMLQ9H3Y0 253 aa15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 OSBPL3Q9H4L5 887 aa15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 AS3MTQ9HBK9 375 aa15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 ZFYVE28Q9HCC9 887 aa15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-210ENST00000586892 TRIM75PA6NK02 468 aa15.97■□□□□ 0.15
SMARCA4-210ENST00000586892 GNAT2P19087 354 aa15.97■□□□□ 0.15
SMARCA4-210ENST00000586892 GABPAQ06546 454 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms