RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 MYL10Q9BUA6 226 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 MCM9Q9NXL9 1143 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 SUGT1Q9Y2Z0 365 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 ECM29Q5VYK3 1845 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 STK36Q9NRP7 1315 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 RANBP6O60518 1105 aaKnown RBP25.99■■□□□ 1.75
CIRBP-208ENST00000586548 BAG6P46379 1132 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 PDE4BQ07343 736 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 ATL3Q6DD88 541 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 IQCA1Q86XH1 822 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 FBXO18Q8NFZ0 1043 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 SPATA32Q96LK8 384 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 EYA3Q99504 573 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 GRPEL1Q9HAV7 217 aa25.99■■□□□ 1.75
CIRBP-208ENST00000586548 GAKO14976 1311 aa25.98■■□□□ 1.75
CIRBP-208ENST00000586548 PLCG2P16885 1265 aa25.98■■□□□ 1.75
CIRBP-208ENST00000586548 BTDP43251 543 aa25.98■■□□□ 1.75
CIRBP-208ENST00000586548 GTF2IP78347 998 aa25.98■■□□□ 1.75
CIRBP-208ENST00000586548 CFAP45Q9UL16 551 aa25.98■■□□□ 1.75
CIRBP-208ENST00000586548 ROBO3Q96MS0 1386 aa25.98■■□□□ 1.75
CIRBP-208ENST00000586548 CYP2D6P10635 497 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 GUCY1B3Q02153 619 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 RTN1Q16799 776 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 C12orf60Q5U649 245 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 AMOTL1Q8IY63 956 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 CCDC144CPQ8IYA2 1237 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 ZNF654Q8IZM8 581 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 LEO1Q8WVC0 666 aaPredicted RBP25.97■■□□□ 1.75
CIRBP-208ENST00000586548 TFIP11Q9UBB9 837 aaKnown RBP25.97■■□□□ 1.75
CIRBP-208ENST00000586548 CCDC196A0A1B0GTZ2 297 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 PRDM1O75626 825 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 IFNAR1P17181 557 aa25.97■■□□□ 1.75
CIRBP-208ENST00000586548 IARSP41252 1262 aaKnown RBP25.97■■□□□ 1.75
CIRBP-208ENST00000586548 ENAHQ8N8S7 591 aaPredicted RBP25.97■■□□□ 1.75
CIRBP-208ENST00000586548 SLX4Q8IY92 1834 aa25.96■■□□□ 1.75
CIRBP-208ENST00000586548 DDX60LQ5H9U9 1706 aaKnown RBP25.96■■□□□ 1.75
CIRBP-208ENST00000586548 USP17L8P0C7I0 530 aa25.96■■□□□ 1.75
CIRBP-208ENST00000586548 XRCC6P12956 609 aaKnown RBP eCLIP25.96■■□□□ 1.75
CIRBP-208ENST00000586548 PPP2R5BQ15173 497 aa25.96■■□□□ 1.75
CIRBP-208ENST00000586548 CNKSR1Q969H4 720 aa25.96■■□□□ 1.75
CIRBP-208ENST00000586548 EVX2Q03828 476 aa25.95■■□□□ 1.74
CIRBP-208ENST00000586548 ZNF396Q96N95 335 aaPredicted RBP25.95■■□□□ 1.74
CIRBP-208ENST00000586548 ALG1Q9BT22 464 aa25.95■■□□□ 1.74
CIRBP-208ENST00000586548 SSRP1Q08945 709 aaKnown RBP25.94■■□□□ 1.74
CIRBP-208ENST00000586548 IFIT1BQ5T764 474 aaKnown RBP25.94■■□□□ 1.74
CIRBP-208ENST00000586548 FMNL1O95466 1100 aaPredicted RBP25.94■■□□□ 1.74
CIRBP-208ENST00000586548 CCDC183Q5T5S1 534 aa25.94■■□□□ 1.74
CIRBP-208ENST00000586548 LRSAM1Q6UWE0 723 aa25.94■■□□□ 1.74
CIRBP-208ENST00000586548 FANCBQ8NB91 859 aa25.94■■□□□ 1.74
CIRBP-208ENST00000586548 TGFBRAP1Q8WUH2 860 aa25.94■■□□□ 1.74
CIRBP-208ENST00000586548 PHKBQ93100 1093 aa25.94■■□□□ 1.74
CIRBP-208ENST00000586548 FOCADQ5VW36 1801 aa25.93■■□□□ 1.74
CIRBP-208ENST00000586548 SYCE3A1L190 88 aa25.93■■□□□ 1.74
CIRBP-208ENST00000586548 BRAPQ7Z569 592 aa25.93■■□□□ 1.74
CIRBP-208ENST00000586548 TEX11Q8IYF3 940 aa25.93■■□□□ 1.74
CIRBP-208ENST00000586548 OTUD7BQ6GQQ9 843 aa25.92■■□□□ 1.74
CIRBP-208ENST00000586548 WASF1Q92558 559 aa25.92■■□□□ 1.74
CIRBP-208ENST00000586548 G3V3G9 751 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 CHRNA5P30532 468 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 RHBDL3P58872 404 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 DOK7Q18PE1 504 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 DCAF8Q5TAQ9 597 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 CATIPQ7Z7H3 387 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 CCDC125Q86Z20 511 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 SLC26A6Q9BXS9 759 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 DDAH1O94760 285 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 CALM1P0DP23 149 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 CALM2P0DP24 149 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 CALM3P0DP25 149 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 PODNQ7Z5L7 613 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 MAPKAPK5Q8IW41 473 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 TRIM22Q8IYM9 498 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 NUP133Q8WUM0 1156 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 FBXW7Q969H0 707 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 DAGLAQ9Y4D2 1042 aa25.91■■□□□ 1.74
CIRBP-208ENST00000586548 LETM1O95202 739 aaPredicted RBP25.9■■□□□ 1.74
CIRBP-208ENST00000586548 KLHL34Q8N239 644 aa25.9■■□□□ 1.74
CIRBP-208ENST00000586548 CERS5Q8N5B7 392 aa25.9■■□□□ 1.74
CIRBP-208ENST00000586548 RCOR1Q9UKL0 485 aa25.9■■□□□ 1.74
CIRBP-208ENST00000586548 C10orf71Q711Q0 1435 aa25.9■■□□□ 1.74
CIRBP-208ENST00000586548 MYH1P12882 1939 aa25.89■■□□□ 1.74
CIRBP-208ENST00000586548 GOLGA6L4A6NEF3 574 aa25.89■■□□□ 1.74
CIRBP-208ENST00000586548 TSPY2A6NKD2 308 aa25.89■■□□□ 1.74
CIRBP-208ENST00000586548 KIF23Q02241 960 aaPredicted RBP25.89■■□□□ 1.74
CIRBP-208ENST00000586548 DEFB132Q7Z7B7 95 aa25.89■■□□□ 1.74
CIRBP-208ENST00000586548 AIFM3Q96NN9 605 aa25.89■■□□□ 1.74
CIRBP-208ENST00000586548 POLR3DP05423 398 aaPredicted RBP25.88■■□□□ 1.73
CIRBP-208ENST00000586548 TRIM29Q14134 588 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 FAM47AQ5JRC9 791 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 KRT40Q6A162 431 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 CC2D2BQ6DHV5 1058 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 NBPF11Q86T75 865 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 CRACR2BQ8N4Y2 399 aaPredicted RBP25.88■■□□□ 1.73
CIRBP-208ENST00000586548 USP28Q96RU2 1077 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 RBM28Q9NW13 759 aaKnown RBP25.88■■□□□ 1.73
CIRBP-208ENST00000586548 FLT1P17948 1338 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 TPRNQ4KMQ1 711 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 C7orf43Q8WVR3 580 aa25.88■■□□□ 1.73
CIRBP-208ENST00000586548 UPF1Q92900 1129 aaKnown RBP eCLIP25.88■■□□□ 1.73
CIRBP-208ENST00000586548 GJB4Q9NTQ9 266 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms