RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 RCSD1Q6JBY9 416 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 NFXL1Q6ZNB6 911 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 NLRP10Q86W26 655 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 GPR161Q8N6U8 529 aaKnown RBP11.38□□□□□ -0.59
ZNF540-203ENST00000586134 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
ZNF540-203ENST00000586134 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 CHPF2Q9P2E5 772 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 LRRC37AA6NMS7 1700 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 ATXN2Q99700 1313 aaKnown RBP11.38□□□□□ -0.59
ZNF540-203ENST00000586134 SASH3O75995 380 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 VEGFAP15692 232 aaPredicted RBP11.38□□□□□ -0.59
ZNF540-203ENST00000586134 RARSP54136 660 aaKnown RBP11.38□□□□□ -0.59
ZNF540-203ENST00000586134 MYBPC2Q14324 1141 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
ZNF540-203ENST00000586134 RPGRQ92834 1020 aaKnown RBP11.38□□□□□ -0.59
ZNF540-203ENST00000586134 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 MAF1Q9H063 256 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 BATF3Q9NR55 127 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 ZNF232Q9UNY5 417 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 CDC45O75419 566 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 GCKP35557 465 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 APLP1P51693 650 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 ZNF75DP51815 510 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 DHX8Q14562 1220 aaKnown RBP11.37□□□□□ -0.59
ZNF540-203ENST00000586134 KRT24Q2M2I5 525 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 FILIP1LQ4L180 1135 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 TBC1D9Q6ZT07 1266 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 IQCA1Q86XH1 822 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 CCAR2Q8N163 923 aaKnown RBP11.37□□□□□ -0.59
ZNF540-203ENST00000586134 INTS4Q96HW7 963 aaKnown RBP11.37□□□□□ -0.59
ZNF540-203ENST00000586134 USP26Q9BXU7 913 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 SH3TC1Q8TE82 1336 aa11.37□□□□□ -0.59
ZNF540-203ENST00000586134 MAP2K7O14733 419 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 SKILP12757 684 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 FOXR1Q6PIV2 292 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 TMC4Q7Z404 712 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 USP48Q86UV5 1035 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 LRRC8AQ8IWT6 810 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 AMOTL1Q8IY63 956 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 SDR16C5Q8N3Y7 309 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 ZGPATQ8N5A5 531 aaKnown RBP11.36□□□□□ -0.59
ZNF540-203ENST00000586134 CACTINQ8WUQ7 758 aaKnown RBP11.36□□□□□ -0.59
ZNF540-203ENST00000586134 ZKSCAN4Q969J2 545 aaPredicted RBP11.36□□□□□ -0.59
ZNF540-203ENST00000586134 L3MBTL3Q96JM7 780 aaPredicted RBP11.36□□□□□ -0.59
ZNF540-203ENST00000586134 GOPCQ9HD26 462 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 BLOC1S6Q9UL45 172 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 ANXA1P04083 346 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 KCNJ6P48051 423 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 IFFO2Q5TF58 517 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 SAAL1Q96ER3 474 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 ZNF396Q96N95 335 aaPredicted RBP11.36□□□□□ -0.59
ZNF540-203ENST00000586134 RRAGCQ9HB90 399 aa11.36□□□□□ -0.59
ZNF540-203ENST00000586134 ERC2O15083 957 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 EPB41L2O43491 1005 aaKnown RBP11.35□□□□□ -0.59
ZNF540-203ENST00000586134 AP1G2O75843 785 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 RAB27AP51159 221 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 ISM2Q6H9L7 571 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 SMC1BQ8NDV3 1235 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
ZNF540-203ENST00000586134 H7C1W4 665 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 TADA3O75528 432 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 BBOX1O75936 387 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 CAVIN2O95810 425 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 AIMP1Q12904 312 aaKnown RBP11.35□□□□□ -0.59
ZNF540-203ENST00000586134 SNW1Q13573 536 aaKnown RBP11.35□□□□□ -0.59
ZNF540-203ENST00000586134 BRD3Q15059 726 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 HHATQ5VTY9 493 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 EXOC8Q8IYI6 725 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 MAGEC3Q8TD91 643 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 STK31Q9BXU1 1019 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 VPS18Q9P253 973 aa11.35□□□□□ -0.59
ZNF540-203ENST00000586134 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
ZNF540-203ENST00000586134 MYH3P11055 1940 aa11.34□□□□□ -0.59
ZNF540-203ENST00000586134 TTC41PQ6P2S7 1318 aa11.34□□□□□ -0.59
ZNF540-203ENST00000586134 PHLPP2Q6ZVD8 1323 aa11.34□□□□□ -0.59
ZNF540-203ENST00000586134 GADD45BO75293 160 aaPredicted RBP11.34□□□□□ -0.59
ZNF540-203ENST00000586134 IARSP41252 1262 aaKnown RBP11.34□□□□□ -0.59
ZNF540-203ENST00000586134 CLNS1AP54105 237 aaKnown RBP11.34□□□□□ -0.59
ZNF540-203ENST00000586134 APOBRQ0VD83 1088 aa11.34□□□□□ -0.59
ZNF540-203ENST00000586134 MAB21L3Q8N8X9 362 aa11.34□□□□□ -0.59
ZNF540-203ENST00000586134 NECTIN2Q92692 538 aa11.34□□□□□ -0.59
ZNF540-203ENST00000586134 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
ZNF540-203ENST00000586134 IQCGQ9H095 443 aaKnown RBP11.34□□□□□ -0.59
ZNF540-203ENST00000586134 TRMT112Q9UI30 125 aaKnown RBP11.34□□□□□ -0.59
ZNF540-203ENST00000586134 ADAMTSL1Q8N6G6 1762 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 CCDC151A5D8V7 595 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 IQCA1LA6NCM1 817 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 POTECB2RU33 542 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 FZD9O00144 591 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 PPEF1O14829 653 aaPredicted RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 SEC31AO94979 1220 aaKnown RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 RTN3O95197 1032 aaPredicted RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 CUL4AQ13619 759 aa11.33□□□□□ -0.6
ZNF540-203ENST00000586134 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 CDCA2Q69YH5 1023 aaPredicted RBP11.33□□□□□ -0.6
ZNF540-203ENST00000586134 SDCCAG8Q86SQ7 713 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms