RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 OSBPL5Q9H0X9 879 aaPredicted RBP24.76■■□□□ 1.55
CLPTM1-204ENST00000585961 AGTPBP1Q9UPW5 1226 aa24.76■■□□□ 1.55
CLPTM1-204ENST00000585961 SLC45A1Q9Y2W3 748 aa24.76■■□□□ 1.55
CLPTM1-204ENST00000585961 TFRCP02786 760 aaKnown RBP24.74■■□□□ 1.55
CLPTM1-204ENST00000585961 UQCRFS1P1P0C7P4 283 aa24.74■■□□□ 1.55
CLPTM1-204ENST00000585961 TTC39AQ5SRH9 613 aa24.74■■□□□ 1.55
CLPTM1-204ENST00000585961 ZNF280CQ8ND82 737 aa24.74■■□□□ 1.55
CLPTM1-204ENST00000585961 NPM3O75607 178 aaKnown RBP24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 CAP2P40123 477 aa24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 HMGCS2P54868 508 aa24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 OS9Q13438 667 aaPredicted RBP24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 CHRDL2Q6WN34 429 aa24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 U2AF1L4Q8WU68 220 aaKnown RBP24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 DBNDD2Q9BQY9 259 aa24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 NOL10Q9BSC4 688 aaKnown RBP24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 AATFQ9NY61 560 aaKnown RBP eCLIP24.73■■□□□ 1.55
CLPTM1-204ENST00000585961 SGPL1O95470 568 aa24.72■■□□□ 1.55
CLPTM1-204ENST00000585961 INHAP05111 366 aa24.72■■□□□ 1.55
CLPTM1-204ENST00000585961 NAA16Q6N069 864 aaPredicted RBP24.72■■□□□ 1.55
CLPTM1-204ENST00000585961 TGFBRAP1Q8WUH2 860 aa24.72■■□□□ 1.55
CLPTM1-204ENST00000585961 C1orf115Q9H7X2 142 aa24.72■■□□□ 1.55
CLPTM1-204ENST00000585961 USP17L5A8MUK1 530 aa24.71■■□□□ 1.55
CLPTM1-204ENST00000585961 ATP8B2P98198 1209 aa24.71■■□□□ 1.55
CLPTM1-204ENST00000585961 UBE2Q1Q7Z7E8 422 aa24.71■■□□□ 1.55
CLPTM1-204ENST00000585961 MAPKAPK5Q8IW41 473 aa24.71■■□□□ 1.55
CLPTM1-204ENST00000585961 COA7Q96BR5 231 aa24.71■■□□□ 1.55
CLPTM1-204ENST00000585961 SURF6O75683 361 aaKnown RBP24.7■■□□□ 1.54
CLPTM1-204ENST00000585961 MAP4K4O95819 1239 aaPredicted RBP24.7■■□□□ 1.54
CLPTM1-204ENST00000585961 TNNI3KQ59H18 835 aa24.7■■□□□ 1.54
CLPTM1-204ENST00000585961 CCDC158Q5M9N0 1113 aa24.7■■□□□ 1.54
CLPTM1-204ENST00000585961 DEFB118Q96PH6 123 aa24.7■■□□□ 1.54
CLPTM1-204ENST00000585961 PI4KBQ9UBF8 816 aa24.7■■□□□ 1.54
CLPTM1-204ENST00000585961 FPGT-TNNI3KV9GXZ4 949 aa24.7■■□□□ 1.54
CLPTM1-204ENST00000585961 FARP2O94887 1054 aaPredicted RBP24.69■■□□□ 1.54
CLPTM1-204ENST00000585961 CYP2E1P05181 493 aaPredicted RBP24.69■■□□□ 1.54
CLPTM1-204ENST00000585961 JAG1P78504 1218 aa24.69■■□□□ 1.54
CLPTM1-204ENST00000585961 ZKSCAN2Q63HK3 967 aa24.69■■□□□ 1.54
CLPTM1-204ENST00000585961 PROCA1Q8NCQ7 364 aaPredicted RBP24.69■■□□□ 1.54
CLPTM1-204ENST00000585961 PNMA3Q9UL41 463 aa24.69■■□□□ 1.54
CLPTM1-204ENST00000585961 PEX10O60683 326 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 BAG3O95817 575 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 ZAP70P43403 619 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 IRF5Q13568 498 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 POLA2Q14181 598 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 SHROOM1Q2M3G4 852 aaPredicted RBP24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 ADGRA1Q86SQ6 560 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 PXYLP1Q8TE99 480 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 HTATIP2Q9BUP3 242 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 ASCC2Q9H1I8 757 aaPredicted RBP24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 RBM27Q9P2N5 1060 aaKnown RBP24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 SAP30BPQ9UHR5 308 aaKnown RBP24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 PALD1Q9ULE6 856 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 DOCK2Q92608 1830 aa24.68■■□□□ 1.54
CLPTM1-204ENST00000585961 CCDC8Q9H0W5 538 aaPredicted RBP24.67■■□□□ 1.54
CLPTM1-204ENST00000585961 CEP290O15078 2479 aa24.67■■□□□ 1.54
CLPTM1-204ENST00000585961 DYNLL1P63167 89 aaKnown RBP24.66■■□□□ 1.54
CLPTM1-204ENST00000585961 FAM110CQ1W6H9 321 aa24.66■■□□□ 1.54
CLPTM1-204ENST00000585961 SSH3Q8TE77 659 aa24.66■■□□□ 1.54
CLPTM1-204ENST00000585961 GPR108Q9NPR9 543 aa24.66■■□□□ 1.54
CLPTM1-204ENST00000585961 PIH1D3Q9NQM4 214 aaKnown RBP24.66■■□□□ 1.54
CLPTM1-204ENST00000585961 HERC5Q9UII4 1024 aaKnown RBP24.66■■□□□ 1.54
CLPTM1-204ENST00000585961 PPP4CP60510 307 aa24.65■■□□□ 1.54
CLPTM1-204ENST00000585961 PABPC4Q13310 644 aaKnown RBP eCLIP24.65■■□□□ 1.54
CLPTM1-204ENST00000585961 MTMR2Q13614 643 aa24.65■■□□□ 1.54
CLPTM1-204ENST00000585961 CRACR2BQ8N4Y2 399 aaPredicted RBP24.65■■□□□ 1.54
CLPTM1-204ENST00000585961 P2RX7Q99572 595 aaKnown RBP24.65■■□□□ 1.54
CLPTM1-204ENST00000585961 DHX36Q9H2U1 1008 aaKnown RBP24.65■■□□□ 1.54
CLPTM1-204ENST00000585961 AS3MTQ9HBK9 375 aa24.65■■□□□ 1.54
CLPTM1-204ENST00000585961 GDF11O95390 407 aa24.64■■□□□ 1.54
CLPTM1-204ENST00000585961 GCLCP48506 637 aaPredicted RBP24.64■■□□□ 1.54
CLPTM1-204ENST00000585961 TRIM32Q13049 653 aa24.64■■□□□ 1.54
CLPTM1-204ENST00000585961 SH3D19Q5HYK7 790 aa24.64■■□□□ 1.54
CLPTM1-204ENST00000585961 FOXP4Q8IVH2 680 aaPredicted RBP24.64■■□□□ 1.54
CLPTM1-204ENST00000585961 TRIM34Q9BYJ4 488 aa24.64■■□□□ 1.54
CLPTM1-204ENST00000585961 GJD2Q9UKL4 321 aa24.64■■□□□ 1.54
CLPTM1-204ENST00000585961 NR2E3Q9Y5X4 410 aa24.64■■□□□ 1.54
CLPTM1-204ENST00000585961 PLCG2P16885 1265 aa24.63■■□□□ 1.53
CLPTM1-204ENST00000585961 CYP7A1P22680 504 aa24.63■■□□□ 1.53
CLPTM1-204ENST00000585961 WDR18Q9BV38 432 aa24.63■■□□□ 1.53
CLPTM1-204ENST00000585961 TBC1D2Q9BYX2 928 aa24.63■■□□□ 1.53
CLPTM1-204ENST00000585961 TLR7Q9NYK1 1049 aaKnown RBP24.63■■□□□ 1.53
CLPTM1-204ENST00000585961 TMOD4Q9NZQ9 345 aa24.63■■□□□ 1.53
CLPTM1-204ENST00000585961 PHIPQ8WWQ0 1821 aa24.63■■□□□ 1.53
CLPTM1-204ENST00000585961 MGAMO43451 1857 aa24.62■■□□□ 1.53
CLPTM1-204ENST00000585961 BACE1P56817 501 aa24.62■■□□□ 1.53
CLPTM1-204ENST00000585961 ITPRIPQ8IWB1 547 aa24.62■■□□□ 1.53
CLPTM1-204ENST00000585961 PAWRQ96IZ0 340 aaKnown RBP24.62■■□□□ 1.53
CLPTM1-204ENST00000585961 DNAJC18Q9H819 358 aa24.62■■□□□ 1.53
CLPTM1-204ENST00000585961 NDUFB9Q9Y6M9 179 aa24.62■■□□□ 1.53
CLPTM1-204ENST00000585961 DOCK1Q14185 1865 aa24.62■■□□□ 1.53
CLPTM1-204ENST00000585961 FLT1P17948 1338 aa24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 ZBTB7BO15156 539 aaPredicted RBP24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 EVI5O60447 810 aa24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 ASNSP08243 561 aa24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 RLBP1P12271 317 aa24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 CYP2B6P20813 491 aa24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 IRX3P78415 501 aaPredicted RBP24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 FTSJ3Q8IY81 847 aaKnown RBP24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 PAK6Q9NQU5 681 aaPredicted RBP24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 DBNLQ9UJU6 430 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms