RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
AC055811.3-201ENST00000584952 ANKRD13CQ8N6S4 541 aa16.51■□□□□ 0.23
AC055811.3-201ENST00000584952 PXYLP1Q8TE99 480 aa16.51■□□□□ 0.23
AC055811.3-201ENST00000584952 UNC93B1Q9H1C4 597 aa16.51■□□□□ 0.23
AC055811.3-201ENST00000584952 COL2A1P02458 1487 aaPredicted RBP16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 CAP2P40123 477 aa16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 IRF5Q13568 498 aa16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 TEX11Q8IYF3 940 aa16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 ZNF280CQ8ND82 737 aa16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 PNMA3Q9UL41 463 aa16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
AC055811.3-201ENST00000584952 ELNP15502 786 aa16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 POLA2Q14181 598 aa16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 TMEM57Q8N5G2 664 aa16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 U2AF1L4Q8WU68 220 aaKnown RBP16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 NOL10Q9BSC4 688 aaKnown RBP16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 HERC5Q9UII4 1024 aaKnown RBP16.49■□□□□ 0.23
AC055811.3-201ENST00000584952 PHIPQ8WWQ0 1821 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 SGPL1O95470 568 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 BAG3O95817 575 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 INHAP05111 366 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 HMGCS2P54868 508 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 FAM110CQ1W6H9 321 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 CCDC158Q5M9N0 1113 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 NAA16Q6N069 864 aaPredicted RBP16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 COA7Q96BR5 231 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 HTATIP2Q9BUP3 242 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 DHX36Q9H2U1 1008 aaKnown RBP16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
AC055811.3-201ENST00000584952 USP17L5A8MUK1 530 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 PLCG2P16885 1265 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 TNNI3KQ59H18 835 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 TTC39AQ5SRH9 613 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 SSH3Q8TE77 659 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 AATFQ9NY61 560 aaKnown RBP eCLIP16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 FPGT-TNNI3KV9GXZ4 949 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 MGAMO43451 1857 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 PTPRFP10586 1907 aa16.47■□□□□ 0.23
AC055811.3-201ENST00000584952 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 FARP2O94887 1054 aaPredicted RBP16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 GCLCP48506 637 aaPredicted RBP16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 PPP4CP60510 307 aa16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 PABPC4Q13310 644 aaKnown RBP eCLIP16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 SH3D19Q5HYK7 790 aa16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 ADGRA1Q86SQ6 560 aa16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 AS3MTQ9HBK9 375 aa16.46■□□□□ 0.23
AC055811.3-201ENST00000584952 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 TGFBRAP1Q8WUH2 860 aa16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 ZNF512BQ96KM6 892 aaPredicted RBP16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 DEFB118Q96PH6 123 aa16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 WDR18Q9BV38 432 aa16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 PAK6Q9NQU5 681 aaPredicted RBP16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 CEP290O15078 2479 aa16.45■□□□□ 0.22
AC055811.3-201ENST00000584952 IGSF3O75054 1194 aa16.44■□□□□ 0.22
AC055811.3-201ENST00000584952 CAPN2P17655 700 aa16.44■□□□□ 0.22
AC055811.3-201ENST00000584952 JAG1P78504 1218 aa16.44■□□□□ 0.22
AC055811.3-201ENST00000584952 METTL16Q86W50 562 aaKnown RBP16.44■□□□□ 0.22
AC055811.3-201ENST00000584952 MAPKAPK5Q8IW41 473 aa16.44■□□□□ 0.22
AC055811.3-201ENST00000584952 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
AC055811.3-201ENST00000584952 ASNSP08243 561 aa16.43■□□□□ 0.22
AC055811.3-201ENST00000584952 MTMR2Q13614 643 aa16.43■□□□□ 0.22
AC055811.3-201ENST00000584952 DNAJC18Q9H819 358 aa16.43■□□□□ 0.22
AC055811.3-201ENST00000584952 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
AC055811.3-201ENST00000584952 PALD1Q9ULE6 856 aa16.43■□□□□ 0.22
AC055811.3-201ENST00000584952 NOP58Q9Y2X3 529 aaKnown RBP16.43■□□□□ 0.22
AC055811.3-201ENST00000584952 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
AC055811.3-201ENST00000584952 FLT1P17948 1338 aa16.43■□□□□ 0.22
AC055811.3-201ENST00000584952 ZAP70P43403 619 aa16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 BACE1P56817 501 aa16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 CRISPLD2Q9H0B8 497 aa16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 PIH1D3Q9NQM4 214 aaKnown RBP16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 TMOD4Q9NZQ9 345 aa16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 DBNLQ9UJU6 430 aaKnown RBP16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 GJD2Q9UKL4 321 aa16.42■□□□□ 0.22
AC055811.3-201ENST00000584952 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
AC055811.3-201ENST00000584952 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
AC055811.3-201ENST00000584952 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
AC055811.3-201ENST00000584952 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
AC055811.3-201ENST00000584952 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
AC055811.3-201ENST00000584952 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
AC055811.3-201ENST00000584952 GINM1Q9NU53 330 aa16.41■□□□□ 0.22
AC055811.3-201ENST00000584952 TLR7Q9NYK1 1049 aaKnown RBP16.41■□□□□ 0.22
AC055811.3-201ENST00000584952 MORF4L1Q9UBU8 362 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms