RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 DYMQ7RTS9 669 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 PSMG3-AS1Q96PY0 264 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 MKNK1Q9BUB5 465 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 C7orf69Q9H7B7 122 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 LIN7BQ9HAP6 207 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 ZFYVE28Q9HCC9 887 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 RGPD3A6NKT7 1758 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 RGPD4Q7Z3J3 1758 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 ARID4BQ4LE39 1312 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 FAM26DQ5JW98 314 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 SH3PXD2AQ5TCZ1 1133 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 GALNT12Q8IXK2 581 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 RASSF4Q9H2L5 321 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 RTEL1-TNFRSF6BF6WH68 1400 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 NPHP4O75161 1426 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 SOX4Q06945 474 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 ANGEL2Q5VTE6 544 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 NPAS4Q8IUM7 802 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 CEP120Q8N960 986 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 SSBP4Q9BWG4 385 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 BHLHE41Q9C0J9 482 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 SALL4Q9UJQ4 1053 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 KIAA1210Q9ULL0 1709 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 TRIM33Q9UPN9 1127 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 SLIT1O75093 1534 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 HOXB4P17483 251 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 GP2P55259 537 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 PLCB3Q01970 1234 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 SETDB1Q15047 1291 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 ZNF326Q5BKZ1 582 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 BHLHE22Q8NFJ8 381 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 FBF1Q8TES7 1133 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 TBC1D32Q96NH3 1257 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 VAV3Q9UKW4 847 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 SPG7Q9UQ90 795 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 FYCO1Q9BQS8 1478 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 INO80Q9ULG1 1556 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 PLCH2O75038 1416 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 RNGTTO60942 597 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 FOSL1P15407 271 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 ASPAP45381 313 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 ARHGAP4P98171 946 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 NAA30Q147X3 362 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 KIAA0319Q5VV43 1072 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 ALG1LQ6GMV1 187 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 DTHD1Q6ZMT9 781 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 PI4K2BQ8TCG2 481 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 KCNMB2Q9Y691 235 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 DISP2A7MBM2 1401 aa2.78□□□□□ -1.96
SMCHD1-211ENST00000584897 UBR1Q8IWV7 1749 aa2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 TNS1Q9HBL0 1735 aaKnown RBP2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 EIF1AXP47813 144 aaKnown RBP2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 GTF3C2Q8WUA4 911 aaPredicted RBP2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 BORCS6Q96GS4 357 aa2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 MEGF10Q96KG7 1140 aa2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 TOX2Q96NM4 488 aa2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 PPM1HQ9ULR3 514 aa2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 ABCC1P33527 1531 aa2.78□□□□□ -1.97
SMCHD1-211ENST00000584897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 COL24A1Q17RW2 1714 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 A0A096LPE4 126 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 A0A1W2PPZ6 126 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 KIAA1324LA8MWY0 1029 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 OLFML2BQ68BL8 750 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 ZNF507Q8TCN5 953 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 NXPE3Q969Y0 559 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 ZFATQ9P243 1243 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 PTPN23Q9H3S7 1636 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 NINLQ9Y2I6 1382 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 HSP90B1P14625 803 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 GRIK5Q16478 980 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 C8orf86Q6ZUL3 223 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 SHKBP1Q8TBC3 707 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 DHX38Q92620 1227 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 ACSBG1Q96GR2 724 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 DZANK1Q9NVP4 752 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 AP4E1Q9UPM8 1137 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 TACC3Q9Y6A5 838 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 NEXMIFQ5QGS0 1516 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 GPATCH8Q9UKJ3 1502 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 ASB11Q8WXH4 323 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 ASCC2Q9H1I8 757 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 GPN3Q9UHW5 284 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 SOX13Q9UN79 622 aa2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 BLMP54132 1417 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-211ENST00000584897 UGGT1Q9NYU2 1555 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 PREX2Q70Z35 1606 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 ID3Q02535 119 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 NETO1Q8TDF5 533 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 BCL2L13Q9BXK5 485 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 SAMD9LQ8IVG5 1584 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 YY1P25490 414 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 NLRP12P59046 1061 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 C1QTNF8P60827 252 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 MRPL58Q14197 206 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 AKAP4Q5JQC9 854 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 DTX1Q86Y01 620 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 ANKRD24Q8TF21 1146 aa2.76□□□□□ -1.97
SMCHD1-211ENST00000584897 FAM84AQ96KN4 292 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms