RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 IFNAR1P17181 557 aa18.24■□□□□ 0.51
TVP23C-210ENST00000584811 DIS3L2Q8IYB7 885 aaKnown RBP18.24■□□□□ 0.51
TVP23C-210ENST00000584811 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
TVP23C-210ENST00000584811 UBAC1Q9BSL1 405 aa18.24■□□□□ 0.51
TVP23C-210ENST00000584811 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
TVP23C-210ENST00000584811 U2AF2P26368 475 aaKnown RBP eCLIP18.23■□□□□ 0.511e-5■□□□□ 9.3
TVP23C-210ENST00000584811 TRIM29Q14134 588 aa18.23■□□□□ 0.51
TVP23C-210ENST00000584811 VPS72Q15906 364 aa18.23■□□□□ 0.51
TVP23C-210ENST00000584811 FANCBQ8NB91 859 aa18.23■□□□□ 0.51
TVP23C-210ENST00000584811 NLRP3Q96P20 1036 aa18.23■□□□□ 0.51
TVP23C-210ENST00000584811 GNL3LQ9NVN8 582 aaKnown RBP18.23■□□□□ 0.51
TVP23C-210ENST00000584811 ANO10Q9NW15 660 aa18.23■□□□□ 0.51
TVP23C-210ENST00000584811 NPHP1O15259 732 aa18.23■□□□□ 0.51
TVP23C-210ENST00000584811 PNOCQ13519 176 aa18.23■□□□□ 0.51
TVP23C-210ENST00000584811 FAM47AQ5JRC9 791 aa18.23■□□□□ 0.51
TVP23C-210ENST00000584811 NSUN4Q96CB9 384 aaKnown RBP18.23■□□□□ 0.51
TVP23C-210ENST00000584811 ERICH2A1L162 156 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 PLEKHA8P1O95397 391 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 SLC3A2P08195 630 aaKnown RBP18.22■□□□□ 0.51
TVP23C-210ENST00000584811 SEC23AQ15436 765 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 PTPN21Q16825 1174 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 NOM1Q5C9Z4 860 aaKnown RBP18.22■□□□□ 0.51
TVP23C-210ENST00000584811 CTR9Q6PD62 1173 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 FILIP1Q7Z7B0 1213 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 CRACR2BQ8N4Y2 399 aaPredicted RBP18.22■□□□□ 0.51
TVP23C-210ENST00000584811 CHD4Q14839 1912 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 CACNA1SQ13698 1873 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 ECM29Q5VYK3 1845 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 CMA1P23946 247 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 EARS2Q5JPH6 523 aaKnown RBP18.22■□□□□ 0.51
TVP23C-210ENST00000584811 FBXO33Q7Z6M2 555 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
TVP23C-210ENST00000584811 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 TPM2P07951 284 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 TM4SF1P30408 202 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
TVP23C-210ENST00000584811 GRIK5Q16478 980 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 SPTLC3Q9NUV7 552 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 VPS54Q9P1Q0 977 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 USP21Q9UK80 565 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 PCDHB6Q9Y5E3 794 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 BCORQ6W2J9 1755 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 MMP1P03956 469 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 SYKP43405 635 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 NFIXQ14938 502 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 LONRF3Q496Y0 759 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 NOSTRINQ8IVI9 506 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 FAM13BQ9NYF5 915 aa18.21■□□□□ 0.51
TVP23C-210ENST00000584811 GOLGA6L6A8MZA4 724 aa18.21■□□□□ 0.5
TVP23C-210ENST00000584811 VEGFAP15692 232 aaPredicted RBP18.21■□□□□ 0.5
TVP23C-210ENST00000584811 SLC10A5Q5PT55 438 aa18.21■□□□□ 0.5
TVP23C-210ENST00000584811 CEP57L1Q8IYX8 460 aa18.21■□□□□ 0.5
TVP23C-210ENST00000584811 MYH2Q9UKX2 1941 aa18.2■□□□□ 0.5
TVP23C-210ENST00000584811 WNT7AO00755 349 aa18.2■□□□□ 0.5
TVP23C-210ENST00000584811 HIBADHP31937 336 aaKnown RBP18.2■□□□□ 0.5
TVP23C-210ENST00000584811 USP49Q70CQ1 688 aa18.2■□□□□ 0.5
TVP23C-210ENST00000584811 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
TVP23C-210ENST00000584811 BCL11BQ9C0K0 894 aaPredicted RBP18.2■□□□□ 0.5
TVP23C-210ENST00000584811 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
TVP23C-210ENST00000584811 ESR2Q92731 530 aa18.19■□□□□ 0.5
TVP23C-210ENST00000584811 ARID3AQ99856 593 aa18.19■□□□□ 0.5
TVP23C-210ENST00000584811 LAMB2P55268 1798 aa18.19■□□□□ 0.5
TVP23C-210ENST00000584811 ADAMTS3O15072 1205 aa18.19■□□□□ 0.5
TVP23C-210ENST00000584811 ZSCAN10Q96SZ4 725 aaPredicted RBP18.19■□□□□ 0.5
TVP23C-210ENST00000584811 RNF41Q9H4P4 317 aaPredicted RBP18.19■□□□□ 0.5
TVP23C-210ENST00000584811 CABP5Q9NP86 173 aa18.19■□□□□ 0.5
TVP23C-210ENST00000584811 TIAM2Q8IVF5 1701 aa18.19■□□□□ 0.5
TVP23C-210ENST00000584811 HSP90AA4PQ58FG1 418 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 TRIM22Q8IYM9 498 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 GRAMD1CQ8IYS0 662 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 HPSEQ9Y251 543 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 CASZ1Q86V15 1759 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 ATP1A3P13637 1013 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 PDILTQ8N807 584 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 UBE2Q2Q8WVN8 375 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 C16orf45Q96MC5 204 aaPredicted RBP18.18■□□□□ 0.5
TVP23C-210ENST00000584811 V9GY48 417 aaPredicted RBP18.18■□□□□ 0.5
TVP23C-210ENST00000584811 PKN1Q16512 942 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
TVP23C-210ENST00000584811 DCP1AQ9NPI6 582 aaPredicted RBP18.18■□□□□ 0.5
TVP23C-210ENST00000584811 LRRC4BQ9NT99 713 aa18.18■□□□□ 0.5
TVP23C-210ENST00000584811 USP27XA6NNY8 438 aa18.17■□□□□ 0.5
TVP23C-210ENST00000584811 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
TVP23C-210ENST00000584811 DIXDC1Q155Q3 683 aa18.17■□□□□ 0.5
TVP23C-210ENST00000584811 IFIT1BQ5T764 474 aaKnown RBP18.17■□□□□ 0.5
TVP23C-210ENST00000584811 FAM196AQ6ZSG2 479 aa18.17■□□□□ 0.5
TVP23C-210ENST00000584811 USP17L8P0C7I0 530 aa18.17■□□□□ 0.5
TVP23C-210ENST00000584811 ZRSR1Q15695 479 aaKnown RBP18.17■□□□□ 0.5
TVP23C-210ENST00000584811 RESP18Q5W5W9 173 aa18.17■□□□□ 0.5
TVP23C-210ENST00000584811 ANKIB1Q9P2G1 1089 aa18.17■□□□□ 0.5
TVP23C-210ENST00000584811 ANAPC4Q9UJX5 808 aa18.17■□□□□ 0.5
TVP23C-210ENST00000584811 STK36Q9NRP7 1315 aa18.17■□□□□ 0.5
TVP23C-210ENST00000584811 NCAPHQ15003 741 aa18.16■□□□□ 0.5
TVP23C-210ENST00000584811 SARM1Q6SZW1 724 aa18.16■□□□□ 0.5
TVP23C-210ENST00000584811 MYH13Q9UKX3 1938 aa18.16■□□□□ 0.5
TVP23C-210ENST00000584811 A0A1B0GUL6 1792 aa18.16■□□□□ 0.5
TVP23C-210ENST00000584811 PPP6R2O75170 966 aa18.16■□□□□ 0.5
TVP23C-210ENST00000584811 DEXIO95424 95 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms