RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 MYH2Q9UKX2 1941 aa12.71□□□□□ -0.37
GGA3-219ENST00000584550 GCLCP48506 637 aaPredicted RBP12.71□□□□□ -0.37
GGA3-219ENST00000584550 HMGCS2P54868 508 aa12.71□□□□□ -0.37
GGA3-219ENST00000584550 ZNF697Q5TEC3 545 aa12.71□□□□□ -0.37
GGA3-219ENST00000584550 LPIN2Q92539 896 aa12.71□□□□□ -0.37
GGA3-219ENST00000584550 IDI2Q9BXS1 227 aa12.71□□□□□ -0.37
GGA3-219ENST00000584550 ASCC2Q9H1I8 757 aaPredicted RBP12.71□□□□□ -0.37
GGA3-219ENST00000584550 DDX4Q9NQI0 724 aaKnown RBP12.71□□□□□ -0.37
GGA3-219ENST00000584550 CDH23Q9H251 3354 aa12.71□□□□□ -0.38
GGA3-219ENST00000584550 UTYO14607 1347 aa12.7□□□□□ -0.38
GGA3-219ENST00000584550 KIF16BQ96L93 1317 aa12.7□□□□□ -0.38
GGA3-219ENST00000584550 COL6A1P12109 1028 aa12.7□□□□□ -0.38
GGA3-219ENST00000584550 CCND3P30281 292 aaPredicted RBP12.7□□□□□ -0.38
GGA3-219ENST00000584550 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
GGA3-219ENST00000584550 FAM109BQ6ICB4 259 aaPredicted RBP12.7□□□□□ -0.38
GGA3-219ENST00000584550 CDX2Q99626 313 aaPredicted RBP12.7□□□□□ -0.38
GGA3-219ENST00000584550 LBHD1Q9BQE6 289 aaPredicted RBP12.7□□□□□ -0.38
GGA3-219ENST00000584550 CACNB2Q08289 660 aaPredicted RBP12.69□□□□□ -0.38
GGA3-219ENST00000584550 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
GGA3-219ENST00000584550 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
GGA3-219ENST00000584550 ZNF280CQ8ND82 737 aa12.69□□□□□ -0.38
GGA3-219ENST00000584550 MAFAQ8NHW3 353 aaPredicted RBP12.69□□□□□ -0.38
GGA3-219ENST00000584550 SENP6Q9GZR1 1112 aaPredicted RBP12.69□□□□□ -0.38
GGA3-219ENST00000584550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.69□□□□□ -0.38
GGA3-219ENST00000584550 EYA2O00167 538 aa12.68□□□□□ -0.38
GGA3-219ENST00000584550 BTDP43251 543 aa12.68□□□□□ -0.38
GGA3-219ENST00000584550 PHKA1P46020 1223 aa12.68□□□□□ -0.38
GGA3-219ENST00000584550 PABPC4Q13310 644 aaKnown RBP eCLIP12.68□□□□□ -0.38
GGA3-219ENST00000584550 CCL14Q16627 93 aa12.68□□□□□ -0.38
GGA3-219ENST00000584550 LHX8Q68G74 356 aa12.68□□□□□ -0.38
GGA3-219ENST00000584550 DZIP1Q86YF9 867 aaKnown RBP12.68□□□□□ -0.38
GGA3-219ENST00000584550 TRMT2AQ8IZ69 625 aaKnown RBP12.68□□□□□ -0.38
GGA3-219ENST00000584550 NUDT12Q9BQG2 462 aa12.68□□□□□ -0.38
GGA3-219ENST00000584550 SIL1Q9H173 461 aa12.68□□□□□ -0.38
GGA3-219ENST00000584550 GNL3LQ9NVN8 582 aaKnown RBP12.68□□□□□ -0.38
GGA3-219ENST00000584550 ABCF2Q9UG63 623 aa12.68□□□□□ -0.38
GGA3-219ENST00000584550 LOC285556D6RIA3 1793 aa12.67□□□□□ -0.38
GGA3-219ENST00000584550 ZKSCAN1P17029 563 aaPredicted RBP12.67□□□□□ -0.38
GGA3-219ENST00000584550 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
GGA3-219ENST00000584550 RRP1BQ14684 758 aaKnown RBP12.67□□□□□ -0.38
GGA3-219ENST00000584550 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
GGA3-219ENST00000584550 ATG9AQ7Z3C6 839 aa12.67□□□□□ -0.38
GGA3-219ENST00000584550 MYLIPQ8WY64 445 aa12.67□□□□□ -0.38
GGA3-219ENST00000584550 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
GGA3-219ENST00000584550 SEMA6BQ9H3T3 888 aa12.67□□□□□ -0.38
GGA3-219ENST00000584550 TXNRD2Q9NNW7 524 aa12.67□□□□□ -0.38
GGA3-219ENST00000584550 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
GGA3-219ENST00000584550 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
GGA3-219ENST00000584550 GAKO14976 1311 aa12.66□□□□□ -0.38
GGA3-219ENST00000584550 SALL1Q9NSC2 1324 aa12.66□□□□□ -0.38
GGA3-219ENST00000584550 MUC3AQ02505 3323 aa12.66□□□□□ -0.38
GGA3-219ENST00000584550 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
GGA3-219ENST00000584550 IRX3P78415 501 aaPredicted RBP12.66□□□□□ -0.38
GGA3-219ENST00000584550 CCAR1Q8IX12 1150 aaKnown RBP12.66□□□□□ -0.38
GGA3-219ENST00000584550 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
GGA3-219ENST00000584550 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
GGA3-219ENST00000584550 SSH1Q8WYL5 1049 aa12.66□□□□□ -0.38
GGA3-219ENST00000584550 MORF4L1Q9UBU8 362 aa12.66□□□□□ -0.38
GGA3-219ENST00000584550 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
GGA3-219ENST00000584550 COL2A1P02458 1487 aaPredicted RBP12.65□□□□□ -0.38
GGA3-219ENST00000584550 USP17L5A8MUK1 530 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 TBC1D12O60347 775 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 XRCC5P13010 732 aaKnown RBP12.65□□□□□ -0.38
GGA3-219ENST00000584550 COL9A1P20849 921 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 ADORA1P30542 326 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 MTMR2Q13614 643 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 SHHQ15465 462 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 Q3C1V9 767 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 OSBPL5Q9H0X9 879 aaPredicted RBP12.65□□□□□ -0.38
GGA3-219ENST00000584550 SMC4Q9NTJ3 1288 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 PRKAG2Q9UGJ0 569 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 RAPGEFL1Q9UHV5 662 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 NDUFB9Q9Y6M9 179 aa12.65□□□□□ -0.38
GGA3-219ENST00000584550 CNGA1P29973 690 aa12.64□□□□□ -0.39
GGA3-219ENST00000584550 CAP2P40123 477 aa12.64□□□□□ -0.39
GGA3-219ENST00000584550 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
GGA3-219ENST00000584550 SLF2Q8IX21 1173 aa12.64□□□□□ -0.39
GGA3-219ENST00000584550 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
GGA3-219ENST00000584550 SOCS4Q8WXH5 440 aa12.64□□□□□ -0.39
GGA3-219ENST00000584550 PAGR1Q9BTK6 254 aa12.64□□□□□ -0.39
GGA3-219ENST00000584550 PORCNQ9H237 461 aa12.64□□□□□ -0.39
GGA3-219ENST00000584550 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
GGA3-219ENST00000584550 MROH7-TTC4A0A0A0MT08 1334 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 SEMA3EO15041 775 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 FOSL2P15408 326 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 RGS2P41220 211 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 RHBDL3P58872 404 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 HERVK_113P62684 666 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 MECOMQ03112 1051 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 SH3D19Q5HYK7 790 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 CCDC102BQ68D86 513 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 TRMT44Q8IYL2 757 aaKnown RBP12.63□□□□□ -0.39
GGA3-219ENST00000584550 USP6NLQ92738 828 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 TTYH1Q9H313 450 aaPredicted RBP12.63□□□□□ -0.39
GGA3-219ENST00000584550 AS3MTQ9HBK9 375 aa12.63□□□□□ -0.39
GGA3-219ENST00000584550 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
GGA3-219ENST00000584550 TMOD4Q9NZQ9 345 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms