RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-210ENST00000584340 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
PSMD11-210ENST00000584340 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
PSMD11-210ENST00000584340 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
PSMD11-210ENST00000584340 EHD4Q9H223 541 aa12.94□□□□□ -0.34
PSMD11-210ENST00000584340 PI4KBQ9UBF8 816 aa12.94□□□□□ -0.34
PSMD11-210ENST00000584340 SAP30BPQ9UHR5 308 aaKnown RBP12.94□□□□□ -0.34
PSMD11-210ENST00000584340 ATAD5Q96QE3 1844 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 PATL2C9JE40 543 aaKnown RBP12.93□□□□□ -0.34
PSMD11-210ENST00000584340 PPP1R12BO60237 982 aaPredicted RBP12.93□□□□□ -0.34
PSMD11-210ENST00000584340 SLC10A3P09131 477 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 MAP3K9P80192 1104 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 VGLL4Q14135 290 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 MCMDC2Q4G0Z9 681 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 SBK1Q52WX2 424 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 NOL9Q5SY16 702 aaKnown RBP12.93□□□□□ -0.34
PSMD11-210ENST00000584340 RGMBQ6NW40 437 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 FOXP4Q8IVH2 680 aaPredicted RBP12.93□□□□□ -0.34
PSMD11-210ENST00000584340 ZKSCAN4Q969J2 545 aaPredicted RBP12.93□□□□□ -0.34
PSMD11-210ENST00000584340 AIDAQ96BJ3 306 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
PSMD11-210ENST00000584340 PTPRFP10586 1907 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 GREB1LQ9C091 1923 aaPredicted RBP12.92□□□□□ -0.34
PSMD11-210ENST00000584340 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 USP17L21D6R901 530 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 SHMT1P34896 483 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 NF2P35240 595 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 DOCK1Q14185 1865 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 ALX1Q15699 326 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 IFNL3Q8IZI9 196 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 CAPNS2Q96L46 248 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 NOL10Q9BSC4 688 aaKnown RBP12.92□□□□□ -0.34
PSMD11-210ENST00000584340 ZNF341Q9BYN7 854 aa12.92□□□□□ -0.34
PSMD11-210ENST00000584340 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.92□□□□□ -0.34
PSMD11-210ENST00000584340 HERC5Q9UII4 1024 aaKnown RBP12.92□□□□□ -0.34
PSMD11-210ENST00000584340 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
PSMD11-210ENST00000584340 WDR33Q9C0J8 1336 aaKnown RBP12.91□□□□□ -0.34
PSMD11-210ENST00000584340 AOC2O75106 756 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 HSPD1P10809 573 aaKnown RBP12.91□□□□□ -0.34
PSMD11-210ENST00000584340 GUCY1A2P33402 732 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 USP5P45974 858 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 IREB2P48200 963 aaKnown RBP12.91□□□□□ -0.34
PSMD11-210ENST00000584340 MOGSQ13724 837 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 SLC4A8Q2Y0W8 1093 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 SPRYD7Q5W111 196 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 ANKRD13AQ8IZ07 590 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 NKX2-3Q8TAU0 364 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 DYNLL2Q96FJ2 89 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 WRNIP1Q96S55 665 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 MCM9Q9NXL9 1143 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 ROBO3Q96MS0 1386 aa12.91□□□□□ -0.34
PSMD11-210ENST00000584340 CTNND1O60716 968 aaKnown RBP12.9□□□□□ -0.34
PSMD11-210ENST00000584340 FGAP02671 866 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 FGRP09769 529 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 GNAT2P19087 354 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 CAP2P40123 477 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 ZNF157P51786 506 aaPredicted RBP12.9□□□□□ -0.34
PSMD11-210ENST00000584340 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
PSMD11-210ENST00000584340 DCAF15Q66K64 600 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
PSMD11-210ENST00000584340 ZSCAN29Q8IWY8 852 aaPredicted RBP12.9□□□□□ -0.34
PSMD11-210ENST00000584340 SLC44A5Q8NCS7 719 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 HOOK2Q96ED9 719 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 WNK4Q96J92 1243 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
PSMD11-210ENST00000584340 SERPINB13Q9UIV8 391 aa12.9□□□□□ -0.34
PSMD11-210ENST00000584340 CCDC171Q6TFL3 1326 aa12.89□□□□□ -0.35
PSMD11-210ENST00000584340 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
PSMD11-210ENST00000584340 SPDYE5A6NIY4 337 aa12.89□□□□□ -0.35
PSMD11-210ENST00000584340 SGSM2O43147 1006 aa12.89□□□□□ -0.35
PSMD11-210ENST00000584340 PTPRAP18433 802 aa12.89□□□□□ -0.35
PSMD11-210ENST00000584340 C16orf86Q6ZW13 317 aa12.89□□□□□ -0.35
PSMD11-210ENST00000584340 SIAH1Q8IUQ4 282 aa12.89□□□□□ -0.35
PSMD11-210ENST00000584340 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
PSMD11-210ENST00000584340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.89□□□□□ -0.35
PSMD11-210ENST00000584340 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 MAP2K2P36507 400 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 CDK8P49336 464 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 PTH1RQ03431 593 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
PSMD11-210ENST00000584340 TTC6Q86TZ1 520 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
PSMD11-210ENST00000584340 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 SLC10A4Q96EP9 437 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 PTPN18Q99952 460 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 ELP3Q9H9T3 547 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
PSMD11-210ENST00000584340 AFG3L2Q9Y4W6 797 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 MYH8P13535 1937 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
PSMD11-210ENST00000584340 HIP1O00291 1037 aa12.87□□□□□ -0.35
PSMD11-210ENST00000584340 IRF6O14896 467 aa12.87□□□□□ -0.35
PSMD11-210ENST00000584340 POLR3DP05423 398 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms