RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CTNND1O60716 968 aaKnown RBP19.25■□□□□ 0.67
SKA2-209ENST00000583976 ELNP15502 786 aa19.25■□□□□ 0.67
SKA2-209ENST00000583976 HOXD10P28358 340 aa19.25■□□□□ 0.67
SKA2-209ENST00000583976 FASTKD5Q7L8L6 764 aaKnown RBP19.25■□□□□ 0.67
SKA2-209ENST00000583976 SMCR8Q8TEV9 937 aaPredicted RBP19.25■□□□□ 0.67
SKA2-209ENST00000583976 OSBPL5Q9H0X9 879 aaPredicted RBP19.25■□□□□ 0.67
SKA2-209ENST00000583976 C1orf115Q9H7X2 142 aa19.25■□□□□ 0.67
SKA2-209ENST00000583976 RAI14Q9P0K7 980 aa19.25■□□□□ 0.67
SKA2-209ENST00000583976 RRP1P56182 461 aaKnown RBP19.24■□□□□ 0.67
SKA2-209ENST00000583976 GORABQ5T7V8 394 aa19.24■□□□□ 0.67
SKA2-209ENST00000583976 SH3RF3Q8TEJ3 882 aaPredicted RBP19.24■□□□□ 0.67
SKA2-209ENST00000583976 UNC93B1Q9H1C4 597 aa19.24■□□□□ 0.67
SKA2-209ENST00000583976 SNRKQ9NRH2 765 aa19.24■□□□□ 0.67
SKA2-209ENST00000583976 BIN2Q9UBW5 565 aaPredicted RBP19.24■□□□□ 0.67
SKA2-209ENST00000583976 AGTPBP1Q9UPW5 1226 aa19.24■□□□□ 0.67
SKA2-209ENST00000583976 FLT3LGP49771 235 aa19.23■□□□□ 0.67
SKA2-209ENST00000583976 UBE2Q1Q7Z7E8 422 aa19.23■□□□□ 0.67
SKA2-209ENST00000583976 TEX11Q8IYF3 940 aa19.23■□□□□ 0.67
SKA2-209ENST00000583976 ANKRD13CQ8N6S4 541 aa19.23■□□□□ 0.67
SKA2-209ENST00000583976 SLAIN1Q8ND83 568 aa19.23■□□□□ 0.67
SKA2-209ENST00000583976 RNF208Q9H0X6 261 aa19.23■□□□□ 0.67
SKA2-209ENST00000583976 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.23■□□□□ 0.67
SKA2-209ENST00000583976 DOCK3Q8IZD9 2030 aa19.23■□□□□ 0.67
SKA2-209ENST00000583976 TNPO2O14787 897 aaKnown RBP19.22■□□□□ 0.67
SKA2-209ENST00000583976 ZBTB7BO15156 539 aaPredicted RBP19.22■□□□□ 0.67
SKA2-209ENST00000583976 INHAP05111 366 aa19.22■□□□□ 0.67
SKA2-209ENST00000583976 GJA8P48165 433 aa19.22■□□□□ 0.67
SKA2-209ENST00000583976 PDE3AQ14432 1141 aa19.22■□□□□ 0.67
SKA2-209ENST00000583976 SHROOM1Q2M3G4 852 aaPredicted RBP19.22■□□□□ 0.67
SKA2-209ENST00000583976 ADGRA1Q86SQ6 560 aa19.22■□□□□ 0.67
SKA2-209ENST00000583976 DBNDD2Q9BQY9 259 aa19.22■□□□□ 0.67
SKA2-209ENST00000583976 SLC45A1Q9Y2W3 748 aa19.22■□□□□ 0.67
SKA2-209ENST00000583976 TBC1D12O60347 775 aa19.21■□□□□ 0.67
SKA2-209ENST00000583976 GJB1P08034 283 aa19.21■□□□□ 0.67
SKA2-209ENST00000583976 GSTO1P78417 241 aa19.21■□□□□ 0.67
SKA2-209ENST00000583976 SPP2Q13103 211 aa19.21■□□□□ 0.67
SKA2-209ENST00000583976 G3BP1Q13283 466 aaKnown RBP eCLIP19.21■□□□□ 0.67
SKA2-209ENST00000583976 AATFQ9NY61 560 aaKnown RBP eCLIP19.21■□□□□ 0.67
SKA2-209ENST00000583976 TAOK2Q9UL54 1235 aa19.21■□□□□ 0.67
SKA2-209ENST00000583976 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
SKA2-209ENST00000583976 LAMA3Q16787 3333 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 ALPK3Q96L96 1907 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 ADCY3O60266 1144 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
SKA2-209ENST00000583976 HMGCS2P54868 508 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 UBXN2AP68543 259 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 TNNI3KQ59H18 835 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 CHRDL2Q6WN34 429 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 U2AF1L4Q8WU68 220 aaKnown RBP19.2■□□□□ 0.66
SKA2-209ENST00000583976 DNAJC18Q9H819 358 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 TLR7Q9NYK1 1049 aaKnown RBP19.2■□□□□ 0.66
SKA2-209ENST00000583976 LRP2BPQ9P2M1 347 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 FPGT-TNNI3KV9GXZ4 949 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 PLXNB2O15031 1838 aa19.2■□□□□ 0.66
SKA2-209ENST00000583976 FARP2O94887 1054 aaPredicted RBP19.19■□□□□ 0.66
SKA2-209ENST00000583976 JAG1P78504 1218 aa19.19■□□□□ 0.66
SKA2-209ENST00000583976 POLA2Q14181 598 aa19.19■□□□□ 0.66
SKA2-209ENST00000583976 TTC39AQ5SRH9 613 aa19.19■□□□□ 0.66
SKA2-209ENST00000583976 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
SKA2-209ENST00000583976 FLT1P17948 1338 aa19.19■□□□□ 0.66
SKA2-209ENST00000583976 LDHCP07864 332 aa19.18■□□□□ 0.66
SKA2-209ENST00000583976 UQCRFS1P1P0C7P4 283 aa19.18■□□□□ 0.66
SKA2-209ENST00000583976 CAP2P40123 477 aa19.18■□□□□ 0.66
SKA2-209ENST00000583976 MAPKAPK5Q8IW41 473 aa19.18■□□□□ 0.66
SKA2-209ENST00000583976 ZNF280CQ8ND82 737 aa19.18■□□□□ 0.66
SKA2-209ENST00000583976 DDX60LQ5H9U9 1706 aaKnown RBP19.17■□□□□ 0.66
SKA2-209ENST00000583976 PEX10O60683 326 aa19.17■□□□□ 0.66
SKA2-209ENST00000583976 CYP2E1P05181 493 aaPredicted RBP19.17■□□□□ 0.66
SKA2-209ENST00000583976 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
SKA2-209ENST00000583976 MTMR2Q13614 643 aa19.17■□□□□ 0.66
SKA2-209ENST00000583976 FAM110CQ1W6H9 321 aa19.17■□□□□ 0.66
SKA2-209ENST00000583976 NAA16Q6N069 864 aaPredicted RBP19.17■□□□□ 0.66
SKA2-209ENST00000583976 PROCA1Q8NCQ7 364 aaPredicted RBP19.17■□□□□ 0.66
SKA2-209ENST00000583976 NKX2-3Q8TAU0 364 aa19.17■□□□□ 0.66
SKA2-209ENST00000583976 DPF3Q92784 378 aa19.17■□□□□ 0.66
SKA2-209ENST00000583976 PIH1D3Q9NQM4 214 aaKnown RBP19.17■□□□□ 0.66
SKA2-209ENST00000583976 PNMA3Q9UL41 463 aa19.17■□□□□ 0.66
SKA2-209ENST00000583976 ZAP70P43403 619 aa19.16■□□□□ 0.66
SKA2-209ENST00000583976 IRF5Q13568 498 aa19.16■□□□□ 0.66
SKA2-209ENST00000583976 SSH3Q8TE77 659 aa19.16■□□□□ 0.66
SKA2-209ENST00000583976 TGFBRAP1Q8WUH2 860 aa19.16■□□□□ 0.66
SKA2-209ENST00000583976 ASCC2Q9H1I8 757 aaPredicted RBP19.16■□□□□ 0.66
SKA2-209ENST00000583976 DBNLQ9UJU6 430 aaKnown RBP19.16■□□□□ 0.66
SKA2-209ENST00000583976 GDF11O95390 407 aa19.15■□□□□ 0.66
SKA2-209ENST00000583976 MAP4K4O95819 1239 aaPredicted RBP19.15■□□□□ 0.66
SKA2-209ENST00000583976 DEFB118Q96PH6 123 aa19.15■□□□□ 0.66
SKA2-209ENST00000583976 NOL10Q9BSC4 688 aaKnown RBP19.15■□□□□ 0.66
SKA2-209ENST00000583976 RBM27Q9P2N5 1060 aaKnown RBP19.15■□□□□ 0.66
SKA2-209ENST00000583976 SAP30BPQ9UHR5 308 aaKnown RBP19.15■□□□□ 0.66
SKA2-209ENST00000583976 HERC5Q9UII4 1024 aaKnown RBP19.15■□□□□ 0.66
SKA2-209ENST00000583976 NDUFB9Q9Y6M9 179 aa19.15■□□□□ 0.66
SKA2-209ENST00000583976 USP17L5A8MUK1 530 aa19.14■□□□□ 0.65
SKA2-209ENST00000583976 SURF6O75683 361 aaKnown RBP19.14■□□□□ 0.65
SKA2-209ENST00000583976 DYNLL1P63167 89 aaKnown RBP19.14■□□□□ 0.65
SKA2-209ENST00000583976 TRIM32Q13049 653 aa19.14■□□□□ 0.65
SKA2-209ENST00000583976 PXYLP1Q8TE99 480 aa19.14■□□□□ 0.65
SKA2-209ENST00000583976 GPR108Q9NPR9 543 aa19.14■□□□□ 0.65
SKA2-209ENST00000583976 PAK6Q9NQU5 681 aaPredicted RBP19.14■□□□□ 0.65
SKA2-209ENST00000583976 NAV1Q8NEY1 1877 aa19.14■□□□□ 0.65
SKA2-209ENST00000583976 MYH1P12882 1939 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms