RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 CRISPLD2Q9H0B8 497 aa21.76■■□□□ 1.07
SNX11-212ENST00000583320 DOCK2Q92608 1830 aa21.76■■□□□ 1.07
SNX11-212ENST00000583320 CXCL11O14625 94 aa21.75■■□□□ 1.07
SNX11-212ENST00000583320 PDE8BO95263 885 aa21.75■■□□□ 1.07
SNX11-212ENST00000583320 OS9Q13438 667 aaPredicted RBP21.75■■□□□ 1.07
SNX11-212ENST00000583320 PA2G4Q9UQ80 394 aaKnown RBP21.75■■□□□ 1.07
SNX11-212ENST00000583320 SUGT1Q9Y2Z0 365 aa21.75■■□□□ 1.07
SNX11-212ENST00000583320 A0A0G2JLL6 359 aaPredicted RBP21.74■■□□□ 1.07
SNX11-212ENST00000583320 CIAO1O76071 339 aa21.74■■□□□ 1.07
SNX11-212ENST00000583320 SLURP2P0DP57 97 aa21.74■■□□□ 1.07
SNX11-212ENST00000583320 PRRT2Q7Z6L0 340 aaPredicted RBP21.74■■□□□ 1.07
SNX11-212ENST00000583320 C7orf61Q8IZ16 206 aa21.74■■□□□ 1.07
SNX11-212ENST00000583320 DEFB123Q8N688 67 aa21.74■■□□□ 1.07
SNX11-212ENST00000583320 PXYLP1Q8TE99 480 aa21.74■■□□□ 1.07
SNX11-212ENST00000583320 ZMYND8Q9ULU4 1186 aaPredicted RBP21.74■■□□□ 1.07
SNX11-212ENST00000583320 PHIPQ8WWQ0 1821 aa21.73■■□□□ 1.07
SNX11-212ENST00000583320 PHF20L1A8MW92 1017 aa21.73■■□□□ 1.07
SNX11-212ENST00000583320 TNPO2O14787 897 aaKnown RBP21.73■■□□□ 1.07
SNX11-212ENST00000583320 SMARCA5O60264 1052 aaPredicted RBP21.73■■□□□ 1.07
SNX11-212ENST00000583320 FGFR2P21802 821 aa21.73■■□□□ 1.07
SNX11-212ENST00000583320 IRF5Q13568 498 aa21.73■■□□□ 1.07
SNX11-212ENST00000583320 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.73■■□□□ 1.07
SNX11-212ENST00000583320 APBB1O00213 710 aa21.72■■□□□ 1.07
SNX11-212ENST00000583320 GADL1Q6ZQY3 521 aa21.72■■□□□ 1.07
SNX11-212ENST00000583320 PLEKHM2Q8IWE5 1019 aa21.72■■□□□ 1.07
SNX11-212ENST00000583320 OSBPL3Q9H4L5 887 aa21.72■■□□□ 1.07
SNX11-212ENST00000583320 TAOK2Q9UL54 1235 aa21.72■■□□□ 1.07
SNX11-212ENST00000583320 ZHX2Q9Y6X8 837 aa21.72■■□□□ 1.07
SNX11-212ENST00000583320 EYA2O00167 538 aa21.71■■□□□ 1.07
SNX11-212ENST00000583320 PTPRAP18433 802 aa21.71■■□□□ 1.07
SNX11-212ENST00000583320 PRDX5P30044 214 aa21.71■■□□□ 1.07
SNX11-212ENST00000583320 BMP8BP34820 402 aa21.71■■□□□ 1.07
SNX11-212ENST00000583320 IL15P40933 162 aaPredicted RBP21.71■■□□□ 1.07
SNX11-212ENST00000583320 SCYL3Q8IZE3 742 aa21.71■■□□□ 1.07
SNX11-212ENST00000583320 CLASRPQ8N2M8 674 aaKnown RBP21.71■■□□□ 1.07
SNX11-212ENST00000583320 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.71■■□□□ 1.07
SNX11-212ENST00000583320 LAMA2P24043 3122 aaKnown RBP21.71■■□□□ 1.07
SNX11-212ENST00000583320 SALL3Q9BXA9 1300 aa21.71■■□□□ 1.07
SNX11-212ENST00000583320 DDX60LQ5H9U9 1706 aaKnown RBP21.71■■□□□ 1.07
SNX11-212ENST00000583320 SYN1P17600 705 aa21.7■■□□□ 1.06
SNX11-212ENST00000583320 NECAB2Q7Z6G3 386 aa21.7■■□□□ 1.06
SNX11-212ENST00000583320 CCDC84Q86UT8 332 aaPredicted RBP21.7■■□□□ 1.06
SNX11-212ENST00000583320 AFG3L2Q9Y4W6 797 aa21.7■■□□□ 1.06
SNX11-212ENST00000583320 DOCK1Q14185 1865 aa21.7■■□□□ 1.06
SNX11-212ENST00000583320 PUM3Q15397 648 aaKnown RBP21.69■■□□□ 1.06
SNX11-212ENST00000583320 GPR153Q6NV75 609 aa21.69■■□□□ 1.06
SNX11-212ENST00000583320 SH3BP5LQ7L8J4 393 aa21.69■■□□□ 1.06
SNX11-212ENST00000583320 FASTKD5Q7L8L6 764 aaKnown RBP21.69■■□□□ 1.06
SNX11-212ENST00000583320 USP40Q9NVE5 1235 aa21.69■■□□□ 1.06
SNX11-212ENST00000583320 STXBP5LQ9Y2K9 1186 aa21.69■■□□□ 1.06
SNX11-212ENST00000583320 RFX7Q2KHR2 1363 aa21.69■■□□□ 1.06
SNX11-212ENST00000583320 TRIM32Q13049 653 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 BMP2KLQ5H9B9 411 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 ATG9AQ7Z3C6 839 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 ANKRD13CQ8N6S4 541 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 SIL1Q9H173 461 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 IL1RAPL2Q9NP60 686 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 GPR108Q9NPR9 543 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 MTMR10Q9NXD2 777 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 SLC45A1Q9Y2W3 748 aa21.68■■□□□ 1.06
SNX11-212ENST00000583320 VCANP13611 3396 aa21.67■■□□□ 1.06
SNX11-212ENST00000583320 IFIT1P09914 478 aaKnown RBP21.67■■□□□ 1.06
SNX11-212ENST00000583320 MAGEA10P43363 369 aaPredicted RBP21.67■■□□□ 1.06
SNX11-212ENST00000583320 WDR66Q8TBY9 1149 aa21.67■■□□□ 1.06
SNX11-212ENST00000583320 SMCR8Q8TEV9 937 aaPredicted RBP21.67■■□□□ 1.06
SNX11-212ENST00000583320 PICK1Q9NRD5 415 aa21.67■■□□□ 1.06
SNX11-212ENST00000583320 SPTBN5Q9NRC6 3674 aaKnown RBP21.66■■□□□ 1.06
SNX11-212ENST00000583320 TRIM75PA6NK02 468 aa21.66■■□□□ 1.06
SNX11-212ENST00000583320 PDE1AP54750 535 aa21.66■■□□□ 1.06
SNX11-212ENST00000583320 LRIT3Q3SXY7 679 aa21.66■■□□□ 1.06
SNX11-212ENST00000583320 TREML2Q5T2D2 321 aa21.66■■□□□ 1.06
SNX11-212ENST00000583320 COL25A1Q9BXS0 654 aaPredicted RBP21.66■■□□□ 1.06
SNX11-212ENST00000583320 CAPN2P17655 700 aa21.65■■□□□ 1.06
SNX11-212ENST00000583320 MX1P20591 662 aa21.65■■□□□ 1.06
SNX11-212ENST00000583320 OTUD7AQ8TE49 926 aaPredicted RBP21.65■■□□□ 1.06
SNX11-212ENST00000583320 PLXNB2O15031 1838 aa21.64■■□□□ 1.06
SNX11-212ENST00000583320 TTC41PQ6P2S7 1318 aa21.64■■□□□ 1.05
SNX11-212ENST00000583320 TTC22Q5TAA0 569 aa21.64■■□□□ 1.05
SNX11-212ENST00000583320 TDHQ8IZJ6 230 aa21.64■■□□□ 1.05
SNX11-212ENST00000583320 COA7Q96BR5 231 aa21.64■■□□□ 1.05
SNX11-212ENST00000583320 AGTPBP1Q9UPW5 1226 aa21.64■■□□□ 1.05
SNX11-212ENST00000583320 LOC285556D6RIA3 1793 aa21.64■■□□□ 1.05
SNX11-212ENST00000583320 MYH2Q9UKX2 1941 aa21.63■■□□□ 1.05
SNX11-212ENST00000583320 DDTLA6NHG4 134 aaPredicted RBP21.63■■□□□ 1.05
SNX11-212ENST00000583320 IFIT2P09913 472 aaKnown RBP21.63■■□□□ 1.05
SNX11-212ENST00000583320 TFCP2Q12800 502 aa21.63■■□□□ 1.05
SNX11-212ENST00000583320 ANKLE1Q8NAG6 615 aa21.63■■□□□ 1.05
SNX11-212ENST00000583320 GPATCH3Q96I76 525 aa21.63■■□□□ 1.05
SNX11-212ENST00000583320 DDX4Q9NQI0 724 aaKnown RBP21.63■■□□□ 1.05
SNX11-212ENST00000583320 EYSQ5T1H1 3165 aa21.62■■□□□ 1.05
SNX11-212ENST00000583320 HMGCRP04035 888 aa21.62■■□□□ 1.05
SNX11-212ENST00000583320 LDHBP07195 334 aaKnown RBP21.62■■□□□ 1.05
SNX11-212ENST00000583320 SLC5A1P13866 664 aa21.62■■□□□ 1.05
SNX11-212ENST00000583320 MAP3K10Q02779 954 aa21.62■■□□□ 1.05
SNX11-212ENST00000583320 FAM110CQ1W6H9 321 aa21.62■■□□□ 1.05
SNX11-212ENST00000583320 TNNI3KQ59H18 835 aa21.62■■□□□ 1.05
SNX11-212ENST00000583320 AACSQ86V21 672 aa21.62■■□□□ 1.05
SNX11-212ENST00000583320 LPIN2Q92539 896 aa21.62■■□□□ 1.05
SNX11-212ENST00000583320 EAF2Q96CJ1 260 aaPredicted RBP21.62■■□□□ 1.05
SNX11-212ENST00000583320 IDI2Q9BXS1 227 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms