RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ANKRD34AQ69YU3 496 aa8.83□□□□□ -1
SMARCE1-219ENST00000583294 CYFIP1Q7L576 1253 aa8.83□□□□□ -1
SMARCE1-219ENST00000583294 SPATA32Q96LK8 384 aa8.83□□□□□ -1
SMARCE1-219ENST00000583294 FANCD2OSQ96PS1 177 aa8.83□□□□□ -1
SMARCE1-219ENST00000583294 DISC1Q9NRI5 854 aa8.83□□□□□ -1
SMARCE1-219ENST00000583294 USP35Q9P2H5 1018 aa8.83□□□□□ -1
SMARCE1-219ENST00000583294 CORINQ9Y5Q5 1042 aa8.83□□□□□ -1
SMARCE1-219ENST00000583294 SYNGAP1Q96PV0 1343 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 ASPAP45381 313 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 CLCQ05315 142 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 PRR23CQ6ZRP0 262 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 SREK1Q8WXA9 508 aaKnown RBP8.82□□□□□ -1
SMARCE1-219ENST00000583294 SEC16BQ96JE7 1060 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 UBL7Q96S82 380 aaPredicted RBP8.82□□□□□ -1
SMARCE1-219ENST00000583294 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.82□□□□□ -15e-7■■■□□ 18.9
SMARCE1-219ENST00000583294 CEP41Q9BYV8 373 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 PPT2Q9UMR5 302 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 PCDHB14Q9Y5E9 798 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 ACTL7BQ9Y614 415 aa8.82□□□□□ -1
SMARCE1-219ENST00000583294 RNGTTO60942 597 aaKnown RBP8.81□□□□□ -1
SMARCE1-219ENST00000583294 HCLS1P14317 486 aaPredicted RBP8.81□□□□□ -1
SMARCE1-219ENST00000583294 GRK4P32298 578 aa8.81□□□□□ -1
SMARCE1-219ENST00000583294 ZNF165P49910 485 aa8.81□□□□□ -1
SMARCE1-219ENST00000583294 ERVK-24P63145 666 aa8.81□□□□□ -1
SMARCE1-219ENST00000583294 TTLL4Q14679 1199 aa8.81□□□□□ -1
SMARCE1-219ENST00000583294 FBXW10Q5XX13 1052 aa8.81□□□□□ -1
SMARCE1-219ENST00000583294 CCDC81Q6ZN84 652 aa8.81□□□□□ -1
SMARCE1-219ENST00000583294 C2CD4AQ8NCU7 369 aaPredicted RBP8.81□□□□□ -1
SMARCE1-219ENST00000583294 ATXN3LQ9H3M9 355 aa8.81□□□□□ -1
SMARCE1-219ENST00000583294 GAS2O43903 313 aaKnown RBP8.8□□□□□ -1
SMARCE1-219ENST00000583294 SOX9P48436 509 aa8.8□□□□□ -1
SMARCE1-219ENST00000583294 USP11P51784 963 aa8.8□□□□□ -1
SMARCE1-219ENST00000583294 ETF1P62495 437 aaKnown RBP8.8□□□□□ -1
SMARCE1-219ENST00000583294 MCF2L2Q86YR7 1114 aa8.8□□□□□ -1
SMARCE1-219ENST00000583294 CPLX3Q8WVH0 158 aa8.8□□□□□ -1
SMARCE1-219ENST00000583294 FERD3LQ96RJ6 166 aa8.8□□□□□ -1
SMARCE1-219ENST00000583294 GMLQ99445 158 aa8.8□□□□□ -1
SMARCE1-219ENST00000583294 PIDD1Q9HB75 910 aa8.8□□□□□ -1
SMARCE1-219ENST00000583294 FAM105AQ9NUU6 356 aa8.8□□□□□ -1
SMARCE1-219ENST00000583294 HYAL3O43820 417 aaPredicted RBP8.79□□□□□ -1
SMARCE1-219ENST00000583294 PLCG1P19174 1290 aa8.79□□□□□ -1
SMARCE1-219ENST00000583294 RAB6AP20340 208 aa8.79□□□□□ -1
SMARCE1-219ENST00000583294 RING1Q06587 406 aa8.79□□□□□ -1
SMARCE1-219ENST00000583294 COL9A2Q14055 689 aaPredicted RBP8.79□□□□□ -1
SMARCE1-219ENST00000583294 SF3A1Q15459 793 aaKnown RBP8.79□□□□□ -1
SMARCE1-219ENST00000583294 ZBTB37Q5TC79 503 aa8.79□□□□□ -1
SMARCE1-219ENST00000583294 Q6ZS46 218 aa8.79□□□□□ -1
SMARCE1-219ENST00000583294 RNF214Q8ND24 703 aa8.79□□□□□ -1
SMARCE1-219ENST00000583294 HTR3BO95264 441 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 SSBP05455 408 aaKnown RBP eCLIP8.78□□□□□ -1
SMARCE1-219ENST00000583294 PGRP06401 933 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 NEFMP07197 916 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 FGRP09769 529 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 ATP2B1P20020 1258 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 LRP8Q14114 963 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 REXO1Q8N1G1 1221 aaKnown RBP8.78□□□□□ -1
SMARCE1-219ENST00000583294 FAM46AQ96IP4 442 aaKnown RBP8.78□□□□□ -1
SMARCE1-219ENST00000583294 DRC1Q96MC2 740 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 WNT10AQ9GZT5 417 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 SSU72Q9NP77 194 aaKnown RBP8.78□□□□□ -1
SMARCE1-219ENST00000583294 REV1Q9UBZ9 1251 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 MRVI1Q9Y6F6 885 aa8.78□□□□□ -1
SMARCE1-219ENST00000583294 FANCGO15287 622 aa8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 PDE4BQ07343 736 aa8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 SGO2Q562F6 1265 aa8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 DHX38Q92620 1227 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 ISL2Q96A47 359 aa8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 SRRTQ9BXP5 876 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 GSX1Q9H4S2 264 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 LGR6Q9HBX8 967 aa8.77□□□□□ -1.01
SMARCE1-219ENST00000583294 RXRBP28702 533 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 NTF4P34130 210 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 GTF2F1P35269 517 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 CDC37L1Q7L3B6 337 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 UBE3DQ7Z6J8 389 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 NBPF11Q86T75 865 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 ZNF507Q8TCN5 953 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 FBLIM1Q8WUP2 373 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 UTP4Q969X6 686 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 ANAPC16Q96DE5 110 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 ANTXR1Q9H6X2 564 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 EHMT1Q9H9B1 1298 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 TACC3Q9Y6A5 838 aa8.76□□□□□ -1.01
SMARCE1-219ENST00000583294 IGSF3O75054 1194 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 BMP3P12645 472 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 FSTP19883 344 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 SMYD4Q8IYR2 804 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 CRBNQ96SW2 442 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 KRTAP4-8Q9BYQ9 185 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 FBRSQ9HAH7 460 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 KLHL3Q9UH77 587 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 ZNRF3Q9ULT6 936 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 RNF112Q9ULX5 631 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 DAGLAQ9Y4D2 1042 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 PRR36Q9H6K5 1346 aa8.75□□□□□ -1.01
SMARCE1-219ENST00000583294 ATE1O95260 518 aa8.74□□□□□ -1.01
SMARCE1-219ENST00000583294 NFICP08651 508 aa8.74□□□□□ -1.01
SMARCE1-219ENST00000583294 EIF6P56537 245 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-219ENST00000583294 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms